RNA–Protein interactions for RNA: ENST00000378204.6

EXT1-201, Transcript of exostosin glycosyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXT1, Length 8,270 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-201ENST00000378204 RBM25P49756 843 aaKnown RBP17.53■□□□□ 0.4
EXT1-201ENST00000378204 STRN4Q9NRL3 753 aa17.53■□□□□ 0.4
EXT1-201ENST00000378204 NOL7Q9UMY1 257 aaKnown RBP17.53■□□□□ 0.4
EXT1-201ENST00000378204 KRT32Q14532 448 aa17.53■□□□□ 0.4
EXT1-201ENST00000378204 CTNNA3Q9UI47 895 aa17.53■□□□□ 0.4
EXT1-201ENST00000378204 EFCAB5A4FU69 1503 aa17.53■□□□□ 0.4
EXT1-201ENST00000378204 TNNT1P13805 278 aa17.53■□□□□ 0.4
EXT1-201ENST00000378204 CCDC181Q5TID7 509 aa17.53■□□□□ 0.4
EXT1-201ENST00000378204 SPG7Q9UQ90 795 aa17.52■□□□□ 0.4
EXT1-201ENST00000378204 SEPT7Q16181 437 aaKnown RBP17.52■□□□□ 0.4
EXT1-201ENST00000378204 HECW1Q76N89 1606 aa17.52■□□□□ 0.4
EXT1-201ENST00000378204 CLGNO14967 610 aa17.52■□□□□ 0.4
EXT1-201ENST00000378204 TDO2P48775 406 aa17.52■□□□□ 0.4
EXT1-201ENST00000378204 ZNF530Q6P9A1 599 aaPredicted RBP17.52■□□□□ 0.4
EXT1-201ENST00000378204 SLC52A1Q9NWF4 448 aa17.52■□□□□ 0.39
EXT1-201ENST00000378204 CIZ1Q9ULV3 898 aaPredicted RBP17.52■□□□□ 0.39
EXT1-201ENST00000378204 GRIN2BQ13224 1484 aa17.52■□□□□ 0.39
EXT1-201ENST00000378204 CBX1P83916 185 aa17.52■□□□□ 0.39
EXT1-201ENST00000378204 FKBP4Q02790 459 aaKnown RBP eCLIP17.52■□□□□ 0.39
EXT1-201ENST00000378204 SOGA3Q5TF21 947 aa17.52■□□□□ 0.39
EXT1-201ENST00000378204 NBPF1Q3BBV0 1214 aa17.51■□□□□ 0.39
EXT1-201ENST00000378204 PROSER2Q86WR7 435 aaPredicted RBP17.51■□□□□ 0.39
EXT1-201ENST00000378204 SRGAP3O43295 1099 aa17.51■□□□□ 0.39
EXT1-201ENST00000378204 ZHX3Q9H4I2 956 aa17.51■□□□□ 0.39
EXT1-201ENST00000378204 THEMISQ8N1K5 641 aaPredicted RBP17.51■□□□□ 0.39
EXT1-201ENST00000378204 MYL6BP14649 208 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 CABP1Q9NZU7 370 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 TMCO5BA8MYB1 307 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 BMP2KQ9NSY1 1161 aaPredicted RBP17.5■□□□□ 0.39
EXT1-201ENST00000378204 ERBINQ96RT1 1412 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 SETSIPP0DME0 302 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 AACSQ86V21 672 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 IQCEQ6IPM2 695 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 ZSCAN31Q96LW9 406 aaPredicted RBP17.5■□□□□ 0.39
EXT1-201ENST00000378204 ANKRD18AQ8IVF6 992 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 SPATA32Q96LK8 384 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 GRPEL1Q9HAV7 217 aa17.5■□□□□ 0.39
EXT1-201ENST00000378204 AQRO60306 1485 aaKnown RBP eCLIP17.5■□□□□ 0.39
EXT1-201ENST00000378204 PAXIP1Q6ZW49 1069 aaPredicted RBP17.5■□□□□ 0.39
EXT1-201ENST00000378204 RBM28Q9NW13 759 aaKnown RBP17.49■□□□□ 0.39
EXT1-201ENST00000378204 TOM1L2Q6ZVM7 507 aa17.49■□□□□ 0.39
EXT1-201ENST00000378204 TANGO6Q9C0B7 1094 aa17.49■□□□□ 0.39
EXT1-201ENST00000378204 NUP133Q8WUM0 1156 aa17.49■□□□□ 0.39
EXT1-201ENST00000378204 TICAM2Q86XR7 235 aa17.49■□□□□ 0.39
EXT1-201ENST00000378204 ZSCAN30Q86W11 494 aa17.48■□□□□ 0.39
EXT1-201ENST00000378204 CEP126Q9P2H0 1117 aa17.48■□□□□ 0.39
EXT1-201ENST00000378204 UBAC1Q9BSL1 405 aa17.48■□□□□ 0.39
EXT1-201ENST00000378204 SHTN1A0MZ66 631 aa17.48■□□□□ 0.39
EXT1-201ENST00000378204 MAP4K4O95819 1239 aaPredicted RBP17.48■□□□□ 0.39
EXT1-201ENST00000378204 RTEL1-TNFRSF6BF6WH68 1400 aa17.48■□□□□ 0.39
EXT1-201ENST00000378204 CEP57L1Q8IYX8 460 aa17.47■□□□□ 0.39
EXT1-201ENST00000378204 PDRG1Q9NUG6 133 aa17.47■□□□□ 0.39
EXT1-201ENST00000378204 PPP6R1Q9UPN7 881 aa17.47■□□□□ 0.39
EXT1-201ENST00000378204 BTBD11A6QL63 1104 aa17.47■□□□□ 0.39
EXT1-201ENST00000378204 CWC27Q6UX04 472 aaKnown RBP17.47■□□□□ 0.39
EXT1-201ENST00000378204 NUP62CLQ9H1M0 184 aa17.47■□□□□ 0.39
EXT1-201ENST00000378204 DDX54Q8TDD1 881 aaKnown RBP17.47■□□□□ 0.39
EXT1-201ENST00000378204 WASF1Q92558 559 aa17.47■□□□□ 0.39
EXT1-201ENST00000378204 JAKMIP1Q96N16 626 aaKnown RBP17.46■□□□□ 0.39
EXT1-201ENST00000378204 SMTNL1A8MU46 457 aa17.46■□□□□ 0.39
EXT1-201ENST00000378204 ATAD2Q6PL18 1390 aa17.46■□□□□ 0.39
EXT1-201ENST00000378204 KIAA1328Q86T90 577 aa17.46■□□□□ 0.39
EXT1-201ENST00000378204 FAM177A1Q8N128 213 aaPredicted RBP17.46■□□□□ 0.39
EXT1-201ENST00000378204 FCHSD2O94868 740 aa17.46■□□□□ 0.39
EXT1-201ENST00000378204 PHF23Q9BUL5 403 aaPredicted RBP17.45■□□□□ 0.38
EXT1-201ENST00000378204 GTPBP4Q9BZE4 634 aaKnown RBP17.45■□□□□ 0.38
EXT1-201ENST00000378204 RPAP2Q8IXW5 612 aaPredicted RBP17.44■□□□□ 0.38
EXT1-201ENST00000378204 UPF3BQ9BZI7 483 aaKnown RBP17.44■□□□□ 0.38
EXT1-201ENST00000378204 AEBP2Q6ZN18 517 aaPredicted RBP17.44■□□□□ 0.38
EXT1-201ENST00000378204 GOLGA6L10A0A0M3HER8 536 aa17.44■□□□□ 0.38
EXT1-201ENST00000378204 MNAT1P51948 309 aa17.44■□□□□ 0.38
EXT1-201ENST00000378204 NF2P35240 595 aa17.44■□□□□ 0.38
EXT1-201ENST00000378204 MICALCLQ6ZW33 695 aa17.44■□□□□ 0.38
EXT1-201ENST00000378204 DNAAF4Q8WXU2 420 aa17.44■□□□□ 0.38
EXT1-201ENST00000378204 CPSF2Q9P2I0 782 aaKnown RBP17.44■□□□□ 0.38
EXT1-201ENST00000378204 CEP131Q9UPN4 1083 aa17.44■□□□□ 0.38
EXT1-201ENST00000378204 SPATA24Q86W54 205 aa17.44■□□□□ 0.38
EXT1-201ENST00000378204 MCM4P33991 863 aa17.43■□□□□ 0.38
EXT1-201ENST00000378204 DCAF8L1A6NGE4 600 aa17.43■□□□□ 0.38
EXT1-201ENST00000378204 ENOX2Q16206 610 aaKnown RBP17.43■□□□□ 0.38
EXT1-201ENST00000378204 DYNC1I1O14576 645 aa17.43■□□□□ 0.38
EXT1-201ENST00000378204 LRP2BPQ9P2M1 347 aa17.43■□□□□ 0.38
EXT1-201ENST00000378204 LRRFIP2Q9Y608 721 aaKnown RBP17.43■□□□□ 0.38
EXT1-201ENST00000378204 ARAP1Q96P48 1450 aa17.43■□□□□ 0.38
EXT1-201ENST00000378204 U3KPZ7 1027 aaPredicted RBP17.42■□□□□ 0.38
EXT1-201ENST00000378204 ANKRD30BQ9BXX2 1392 aa17.42■□□□□ 0.38
EXT1-201ENST00000378204 DESP17661 470 aa17.42■□□□□ 0.38
EXT1-201ENST00000378204 SARNPP82979 210 aaKnown RBP17.42■□□□□ 0.38
EXT1-201ENST00000378204 IMMTQ16891 758 aaKnown RBP17.42■□□□□ 0.38
EXT1-201ENST00000378204 MAP3K11Q16584 847 aa17.42■□□□□ 0.38
EXT1-201ENST00000378204 RBM5P52756 815 aaKnown RBP eCLIP17.42■□□□□ 0.38
EXT1-201ENST00000378204 TMCO3Q6UWJ1 677 aa17.42■□□□□ 0.38
EXT1-201ENST00000378204 EPB41L2O43491 1005 aaKnown RBP17.41■□□□□ 0.38
EXT1-201ENST00000378204 CASTP20810 708 aaKnown RBP17.41■□□□□ 0.38
EXT1-201ENST00000378204 ANKRD62A6NC57 917 aa17.41■□□□□ 0.38
EXT1-201ENST00000378204 ZNF397Q8NF99 534 aaPredicted RBP17.41■□□□□ 0.38
EXT1-201ENST00000378204 KIF1BPQ96EK5 621 aa17.41■□□□□ 0.38
EXT1-201ENST00000378204 RPGRIP1LQ68CZ1 1315 aa17.41■□□□□ 0.38
EXT1-201ENST00000378204 SSBP05455 408 aaKnown RBP eCLIP17.41■□□□□ 0.38
EXT1-201ENST00000378204 NFE2L2Q16236 605 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms