RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 CCDC191Q8NCU4 936 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 BEGAINQ9BUH8 593 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 CCT4P50991 539 aaKnown RBP14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 PDRG1Q9NUG6 133 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 HECW1Q76N89 1606 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 SYCE3A1L190 88 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 LARP1BQ659C4 914 aaKnown RBP14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 SCLT1Q96NL6 688 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 PTCD1O75127 700 aaKnown RBP14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 PSMD1Q99460 953 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 C9orf84Q5VXU9 1444 aa14.16□□□□□ -0.14
PCDHA9-201ENST00000378122 MPHOSPH8Q99549 860 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 ANKIB1Q9P2G1 1089 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 SPG7Q9UQ90 795 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 ANKRD1Q15327 319 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 KRT85P78386 507 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 SLC4A8Q2Y0W8 1093 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 SPATA32Q96LK8 384 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 NBPF14Q5TI25 921 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 CDK19Q9BWU1 502 aa14.15□□□□□ -0.14
PCDHA9-201ENST00000378122 CWC27Q6UX04 472 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 CDK5RAP3Q96JB5 506 aa14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 POLD1P28340 1107 aa14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 SLFN5Q08AF3 891 aa14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 SULT6B1Q6IMI4 303 aa14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 CBX1P83916 185 aa14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 ACSBG1Q96GR2 724 aa14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 JAKMIP1Q96N16 626 aaKnown RBP14.14□□□□□ -0.15
PCDHA9-201ENST00000378122 ZSCAN30Q86W11 494 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 PPFIBP1Q86W92 1011 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 PDCL2Q8N4E4 241 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 MAPK8IP2Q13387 824 aaPredicted RBP14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 CAMK4Q16566 473 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 HSP90AB3PQ58FF7 597 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 C20orf194Q5TEA3 1177 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 TMEM57Q8N5G2 664 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 PRG4Q92954 1404 aaPredicted RBP14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 EFCAB5A4FU69 1503 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 PLCD4Q9BRC7 762 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 ZNF408Q9H9D4 720 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 CT47B1P0C2W7 299 aaPredicted RBP14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 CCDC158Q5M9N0 1113 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 RPGRQ92834 1020 aaKnown RBP14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 CIZ1Q9ULV3 898 aaPredicted RBP14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 MYO6Q9UM54 1294 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 HFM1A2PYH4 1435 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 NUP62CLQ9H1M0 184 aa14.13□□□□□ -0.15
PCDHA9-201ENST00000378122 TXLNAP40222 546 aa14.12□□□□□ -0.15
PCDHA9-201ENST00000378122 GNL3LQ9NVN8 582 aaKnown RBP14.12□□□□□ -0.15
PCDHA9-201ENST00000378122 DAPK1P53355 1430 aa14.12□□□□□ -0.15
PCDHA9-201ENST00000378122 HDGFL1Q5TGJ6 251 aa14.12□□□□□ -0.15
PCDHA9-201ENST00000378122 FAM193AP78312 1265 aa14.12□□□□□ -0.15
PCDHA9-201ENST00000378122 AACSQ86V21 672 aa14.12□□□□□ -0.15
PCDHA9-201ENST00000378122 CCDC69A6NI79 296 aa14.11□□□□□ -0.15
PCDHA9-201ENST00000378122 DACH1Q9UI36 760 aa14.11□□□□□ -0.15
PCDHA9-201ENST00000378122 CABP1Q9NZU7 370 aa14.11□□□□□ -0.15
PCDHA9-201ENST00000378122 CBFA2T2O43439 604 aa14.11□□□□□ -0.15
PCDHA9-201ENST00000378122 SMARCA5O60264 1052 aaPredicted RBP14.11□□□□□ -0.15
PCDHA9-201ENST00000378122 NUTM1Q86Y26 1132 aa14.11□□□□□ -0.15
PCDHA9-201ENST00000378122 KIAA0754O94854 1291 aa14.1□□□□□ -0.15
PCDHA9-201ENST00000378122 IL1RAPL2Q9NP60 686 aa14.1□□□□□ -0.15
PCDHA9-201ENST00000378122 CASTP20810 708 aaKnown RBP14.1□□□□□ -0.15
PCDHA9-201ENST00000378122 TMOD3Q9NYL9 352 aa14.1□□□□□ -0.15
PCDHA9-201ENST00000378122 SRCIN1Q9C0H9 1055 aa14.1□□□□□ -0.15
PCDHA9-201ENST00000378122 ZNHIT6Q9NWK9 470 aaKnown RBP14.1□□□□□ -0.15
PCDHA9-201ENST00000378122 RBM26Q5T8P6 1007 aaKnown RBP14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 CCDC181Q5TID7 509 aa14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 ZNF530Q6P9A1 599 aaPredicted RBP14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 JMYQ8N9B5 988 aa14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 EIF3JO75822 258 aaKnown RBP14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 ZNF526Q8TF50 670 aaPredicted RBP14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 KRT18P05783 430 aaKnown RBP14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 ERLIN1O75477 346 aa14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 NSD3Q9BZ95 1437 aa14.09□□□□□ -0.15
PCDHA9-201ENST00000378122 DHX8Q14562 1220 aaKnown RBP14.08□□□□□ -0.15
PCDHA9-201ENST00000378122 BLOC1S2Q6QNY1 142 aa14.08□□□□□ -0.15
PCDHA9-201ENST00000378122 DEF6Q9H4E7 631 aa14.08□□□□□ -0.15
PCDHA9-201ENST00000378122 SLC3A2P08195 630 aaKnown RBP14.08□□□□□ -0.15
PCDHA9-201ENST00000378122 PIP4K2AP48426 406 aaPredicted RBP14.08□□□□□ -0.15
PCDHA9-201ENST00000378122 NUP133Q8WUM0 1156 aa14.08□□□□□ -0.15
PCDHA9-201ENST00000378122 FOXO3O43524 673 aa14.08□□□□□ -0.16
PCDHA9-201ENST00000378122 RRS1Q15050 365 aaKnown RBP14.08□□□□□ -0.16
PCDHA9-201ENST00000378122 GOLGA6L10A6NI86 522 aa14.08□□□□□ -0.16
PCDHA9-201ENST00000378122 GPR162Q16538 588 aa14.08□□□□□ -0.16
PCDHA9-201ENST00000378122 DNAJC5BQ9UF47 199 aa14.08□□□□□ -0.16
PCDHA9-201ENST00000378122 ZSCAN31Q96LW9 406 aaPredicted RBP14.08□□□□□ -0.16
PCDHA9-201ENST00000378122 USP5P45974 858 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 FILIP1Q7Z7B0 1213 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 TANGO6Q9C0B7 1094 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 SYNJ2O15056 1496 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 LMTK3Q96Q04 1460 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 RFC4P35249 363 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 UPF3BQ9BZI7 483 aaKnown RBP14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 SRGAP3O43295 1099 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 CRACR2BQ8N4Y2 399 aaPredicted RBP14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 C6orf229H3BNL8 230 aa14.07□□□□□ -0.16
PCDHA9-201ENST00000378122 ANKRD62A6NC57 917 aa14.06□□□□□ -0.16
PCDHA9-201ENST00000378122 CCDC83Q8IWF9 413 aa14.06□□□□□ -0.16
PCDHA9-201ENST00000378122 CCDC102AQ96A19 550 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms