RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 SMC3Q9UQE7 1217 aa12.07□□□□□ -0.48
RNF38-206ENST00000377885 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.07□□□□□ -0.48
RNF38-206ENST00000377885 CFAP74Q9C0B2 1584 aa12.07□□□□□ -0.48
RNF38-206ENST00000377885 GNAI2P04899 355 aa12.07□□□□□ -0.48
RNF38-206ENST00000377885 OS9Q13438 667 aaPredicted RBP12.07□□□□□ -0.48
RNF38-206ENST00000377885 KCNJ4P48050 445 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 CCDC183Q5T5S1 534 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 LRRCC1Q9C099 1032 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 C8orf58Q8NAV2 365 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 PTPRCP08575 1304 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 GPT2Q8TD30 523 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 NEURL4Q96JN8 1562 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 QRICH2Q9H0J4 1663 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 SLC4A2P04920 1241 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 TMEM63CQ9P1W3 806 aa12.06□□□□□ -0.48
RNF38-206ENST00000377885 GNAI3P08754 354 aa12.05□□□□□ -0.48
RNF38-206ENST00000377885 SRCIN1Q9C0H9 1055 aa12.05□□□□□ -0.48
RNF38-206ENST00000377885 PKP1Q13835 747 aa12.05□□□□□ -0.48
RNF38-206ENST00000377885 MPNDQ8N594 471 aa12.05□□□□□ -0.48
RNF38-206ENST00000377885 CCDC94Q9BW85 323 aaPredicted RBP12.05□□□□□ -0.48
RNF38-206ENST00000377885 PDLIM2Q96JY6 352 aa12.05□□□□□ -0.48
RNF38-206ENST00000377885 PHACTR3Q96KR7 559 aa12.05□□□□□ -0.48
RNF38-206ENST00000377885 CEP85Q6P2H3 762 aa12.05□□□□□ -0.48
RNF38-206ENST00000377885 PTCH1Q13635 1447 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 ANAPC15P60006 121 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 INTS4Q96HW7 963 aaKnown RBP12.04□□□□□ -0.48
RNF38-206ENST00000377885 POLKQ9UBT6 870 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 USP25Q9UHP3 1055 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.04□□□□□ -0.48
RNF38-206ENST00000377885 SHPRHQ149N8 1683 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 EFCAB6Q5THR3 1501 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 REREQ9P2R6 1566 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 SIRT2Q8IXJ6 389 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 EMILIN1Q9Y6C2 1016 aa12.04□□□□□ -0.48
RNF38-206ENST00000377885 ZCCHC11Q5TAX3 1644 aaKnown RBP12.04□□□□□ -0.48
RNF38-206ENST00000377885 ESF1Q9H501 851 aaKnown RBP12.04□□□□□ -0.48
RNF38-206ENST00000377885 NOLC1Q14978 699 aaKnown RBP eCLIP12.03□□□□□ -0.48
RNF38-206ENST00000377885 PRDM10Q9NQV6 1147 aa12.03□□□□□ -0.48
RNF38-206ENST00000377885 ADCY5O95622 1261 aa12.03□□□□□ -0.48
RNF38-206ENST00000377885 MX1P20591 662 aa12.03□□□□□ -0.48
RNF38-206ENST00000377885 DCTN1Q14203 1278 aa12.03□□□□□ -0.48
RNF38-206ENST00000377885 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
RNF38-206ENST00000377885 PDE1AP54750 535 aa12.03□□□□□ -0.48
RNF38-206ENST00000377885 ARAP3Q8WWN8 1544 aa12.02□□□□□ -0.48
RNF38-206ENST00000377885 FIBPO43427 364 aa12.02□□□□□ -0.48
RNF38-206ENST00000377885 FKBP5Q13451 457 aaPredicted RBP12.02□□□□□ -0.48
RNF38-206ENST00000377885 OTUD7AQ8TE49 926 aaPredicted RBP12.02□□□□□ -0.48
RNF38-206ENST00000377885 MYRIPQ8NFW9 859 aa12.02□□□□□ -0.49
RNF38-206ENST00000377885 USP32Q8NFA0 1604 aa12.02□□□□□ -0.49
RNF38-206ENST00000377885 NRXN1Q9ULB1 1477 aa12.02□□□□□ -0.49
RNF38-206ENST00000377885 HTATSF1O43719 755 aaKnown RBP12.02□□□□□ -0.49
RNF38-206ENST00000377885 ESYT1Q9BSJ8 1104 aa12.02□□□□□ -0.49
RNF38-206ENST00000377885 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.49
RNF38-206ENST00000377885 MYO3AQ8NEV4 1616 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 RUFY2Q8WXA3 655 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 GDPD2Q9HCC8 539 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 EXOC6BQ9Y2D4 811 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 FAM83GA6ND36 823 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 SOX12O15370 315 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 CYP2E1P05181 493 aaPredicted RBP12.01□□□□□ -0.49
RNF38-206ENST00000377885 SULT6B1Q6IMI4 303 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 PDCL2Q8N4E4 241 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 BRD1O95696 1058 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 CCDC192P0DO97 292 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 IDI1Q13907 227 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 USP48Q86UV5 1035 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 MEIS3Q99687 375 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 PIK3R4Q99570 1358 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 GPATCH3Q96I76 525 aa12.01□□□□□ -0.49
RNF38-206ENST00000377885 NPATQ14207 1427 aa12□□□□□ -0.49
RNF38-206ENST00000377885 ADGRB3O60242 1522 aa12□□□□□ -0.49
RNF38-206ENST00000377885 MED14O60244 1454 aa12□□□□□ -0.49
RNF38-206ENST00000377885 FBLN1P23142 703 aa12□□□□□ -0.49
RNF38-206ENST00000377885 RRS1Q15050 365 aaKnown RBP12□□□□□ -0.49
RNF38-206ENST00000377885 PIBF1Q8WXW3 757 aa12□□□□□ -0.49
RNF38-206ENST00000377885 VPS37CA5D8V6 355 aaPredicted RBP12□□□□□ -0.49
RNF38-206ENST00000377885 UBE2HP62256 183 aa12□□□□□ -0.49
RNF38-206ENST00000377885 CBX1P83916 185 aa12□□□□□ -0.49
RNF38-206ENST00000377885 AEBP1Q8IUX7 1158 aa12□□□□□ -0.49
RNF38-206ENST00000377885 ZNF771Q7L3S4 317 aaPredicted RBP11.99□□□□□ -0.49
RNF38-206ENST00000377885 CNTROBQ8N137 903 aa11.99□□□□□ -0.49
RNF38-206ENST00000377885 HDGFP51858 240 aaKnown RBP11.99□□□□□ -0.49
RNF38-206ENST00000377885 ZNF830Q96NB3 372 aaPredicted RBP11.99□□□□□ -0.49
RNF38-206ENST00000377885 RIMS2Q9UQ26 1411 aa11.99□□□□□ -0.49
RNF38-206ENST00000377885 ZRSR1Q15695 479 aaKnown RBP11.99□□□□□ -0.49
RNF38-206ENST00000377885 SPC24Q8NBT2 197 aa11.99□□□□□ -0.49
RNF38-206ENST00000377885 PPP4R3BQ5MIZ7 849 aa11.99□□□□□ -0.49
RNF38-206ENST00000377885 UBTFL1P0CB47 393 aaPredicted RBP11.98□□□□□ -0.49
RNF38-206ENST00000377885 HCLS1P14317 486 aaPredicted RBP11.98□□□□□ -0.49
RNF38-206ENST00000377885 NME9Q86XW9 330 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 FAM135BQ49AJ0 1406 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 ZKSCAN1P17029 563 aaPredicted RBP11.98□□□□□ -0.49
RNF38-206ENST00000377885 CCDC30Q5VVM6 783 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 DEPDC5O75140 1603 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 MSH6P52701 1360 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 NRDCO43847 1150 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 MCM10Q7L590 875 aa11.98□□□□□ -0.49
RNF38-206ENST00000377885 ZHX1Q9UKY1 873 aaPredicted RBP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms