RNA–Protein interactions for RNA: ENST00000377670.8

HIF3A-205, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HIF3A, Length 5,852 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-205ENST00000377670 NASPP49321 788 aaPredicted RBP12.92□□□□□ -0.34
HIF3A-205ENST00000377670 SIL1Q9H173 461 aa12.92□□□□□ -0.34
HIF3A-205ENST00000377670 NCKAP5LQ9HCH0 1330 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 TNRQ92752 1358 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 GNAI3P08754 354 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 ST5P78524 1137 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 ATF7IPQ6VMQ6 1270 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 CLASRPQ8N2M8 674 aaKnown RBP12.91□□□□□ -0.34
HIF3A-205ENST00000377670 FSD1Q9BTV5 496 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 NACAP1Q9BZK3 213 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 FAM83GA6ND36 823 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 FCHSD2O94868 740 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 WDR63Q8IWG1 891 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 CRACR2BQ8N4Y2 399 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-205ENST00000377670 RAI14Q9P0K7 980 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 MAP4K4O95819 1239 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-205ENST00000377670 RBM10P98175 930 aaKnown RBP12.91□□□□□ -0.34
HIF3A-205ENST00000377670 IFT57Q9NWB7 429 aa12.91□□□□□ -0.34
HIF3A-205ENST00000377670 SCAF11Q99590 1463 aaKnown RBP12.91□□□□□ -0.34
HIF3A-205ENST00000377670 PRKCSHP14314 528 aaPredicted RBP12.91□□□□□ -0.34
HIF3A-205ENST00000377670 FOSBP53539 338 aa12.9□□□□□ -0.34
HIF3A-205ENST00000377670 C22orf23Q9BZE7 217 aa12.9□□□□□ -0.34
HIF3A-205ENST00000377670 C6orf229H3BNL8 230 aa12.9□□□□□ -0.34
HIF3A-205ENST00000377670 NFE2L2Q16236 605 aa12.9□□□□□ -0.34
HIF3A-205ENST00000377670 MAGI3Q5TCQ9 1506 aa12.9□□□□□ -0.34
HIF3A-205ENST00000377670 STK32BQ9NY57 414 aa12.9□□□□□ -0.34
HIF3A-205ENST00000377670 TMEM57Q8N5G2 664 aa12.9□□□□□ -0.35
HIF3A-205ENST00000377670 PBRM1Q86U86 1689 aa12.9□□□□□ -0.35
HIF3A-205ENST00000377670 A2MP01023 1474 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 NPHP3Q7Z494 1330 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 TPM1P09493 284 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 CCDC70Q6NSX1 233 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 CCDC39Q9UFE4 941 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 CFAP65Q6ZU64 1925 aaKnown RBP12.89□□□□□ -0.35
HIF3A-205ENST00000377670 TFCP2L1Q9NZI6 479 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 MAP7D2Q96T17 732 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 PDE3AQ14432 1141 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 ODF2Q5BJF6 829 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 ANKRD20A12PQ8NF67 263 aa12.89□□□□□ -0.35
HIF3A-205ENST00000377670 ERC1Q8IUD2 1116 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 LRRC59Q96AG4 307 aaKnown RBP12.88□□□□□ -0.35
HIF3A-205ENST00000377670 A0A087WZG4 1122 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 CT47A1Q5JQC4 288 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-205ENST00000377670 SSH1Q8WYL5 1049 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 CCDC85AQ96PX6 553 aaPredicted RBP12.88□□□□□ -0.35
HIF3A-205ENST00000377670 HOOK1Q9UJC3 728 aaKnown RBP12.88□□□□□ -0.35
HIF3A-205ENST00000377670 REC8O95072 547 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 MYO1BO43795 1136 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 TRAK2O60296 914 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 MVPQ14764 893 aaKnown RBP12.88□□□□□ -0.35
HIF3A-205ENST00000377670 CAVIN4Q5BKX8 364 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 MTERF4Q7Z6M4 381 aaKnown RBP12.88□□□□□ -0.35
HIF3A-205ENST00000377670 CFAP43Q8NDM7 1665 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 BICD2Q8TD16 824 aa12.88□□□□□ -0.35
HIF3A-205ENST00000377670 KDM4AO75164 1064 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 NF2P35240 595 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 NUCB2P80303 420 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 ABCA5Q8WWZ7 1642 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 ACEP12821 1306 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 RNF214Q8ND24 703 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 CDK5RAP3Q96JB5 506 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 ITSN2Q9NZM3 1697 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 HSP90AB3PQ58FF7 597 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 LRP2BPQ9P2M1 347 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 NUP160Q12769 1436 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 F6X3S4 739 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 ZSCAN25Q6NSZ9 544 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 STK11IPQ8N1F8 1099 aa12.87□□□□□ -0.35
HIF3A-205ENST00000377670 AMOTQ4VCS5 1084 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 NINLQ9Y2I6 1382 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 DUOX2Q9NRD8 1548 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 CHRNA2Q15822 529 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 DDB1Q16531 1140 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 NOM1Q5C9Z4 860 aaKnown RBP12.86□□□□□ -0.35
HIF3A-205ENST00000377670 WWC3Q9ULE0 1092 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 IL1RAPL2Q9NP60 686 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 ARGLU1Q9NWB6 273 aaPredicted RBP12.86□□□□□ -0.35
HIF3A-205ENST00000377670 INTS3Q68E01 1043 aaKnown RBP12.86□□□□□ -0.35
HIF3A-205ENST00000377670 ACSBG1Q96GR2 724 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 CEP126Q9P2H0 1117 aa12.86□□□□□ -0.35
HIF3A-205ENST00000377670 MNS1Q8NEH6 495 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 FBXO3Q9UK99 471 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 PARP3Q9Y6F1 533 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 PRAG1Q86YV5 1406 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 TCOF1Q13428 1488 aaKnown RBP12.85□□□□□ -0.35
HIF3A-205ENST00000377670 GNAI2P04899 355 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 LMOD1P29536 600 aaPredicted RBP12.85□□□□□ -0.35
HIF3A-205ENST00000377670 BAG6P46379 1132 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 SCLT1Q96NL6 688 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 KRT18P05783 430 aaKnown RBP12.85□□□□□ -0.35
HIF3A-205ENST00000377670 CEP170Q5SW79 1584 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 RARSP54136 660 aaKnown RBP12.85□□□□□ -0.35
HIF3A-205ENST00000377670 SOGA3Q5TF21 947 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 DUSP27Q5VZP5 1158 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 GNAT3A8MTJ3 354 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 HSP90AB2PQ58FF8 381 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 SASS6Q6UVJ0 657 aa12.85□□□□□ -0.35
HIF3A-205ENST00000377670 VPS37CA5D8V6 355 aaPredicted RBP12.84□□□□□ -0.35
HIF3A-205ENST00000377670 EPS15P42566 896 aa12.84□□□□□ -0.35
HIF3A-205ENST00000377670 TESK2Q96S53 571 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms