RNA–Protein interactions for RNA: ENST00000377526.3

AUP1-201, Transcript of AUP1, lipid droplet regulating VLDL assembly factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AUP1, Length 1,695 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AUP1-201ENST00000377526 THSD7AQ9UPZ6 1657 aa25.93■■□□□ 1.74
AUP1-201ENST00000377526 TATP17735 454 aaPredicted RBP25.93■■□□□ 1.74
AUP1-201ENST00000377526 POTEAQ6S8J7 498 aa25.92■■□□□ 1.74
AUP1-201ENST00000377526 LRRC37A3O60309 1634 aa25.91■■□□□ 1.74
AUP1-201ENST00000377526 SHANK3Q9BYB0 1731 aa25.91■■□□□ 1.74
AUP1-201ENST00000377526 RUNDC1Q96C34 613 aa25.9■■□□□ 1.74
AUP1-201ENST00000377526 PNNQ9H307 717 aaKnown RBP25.89■■□□□ 1.73
AUP1-201ENST00000377526 PLEKHG2Q9H7P9 1386 aa25.88■■□□□ 1.73
AUP1-201ENST00000377526 RBM6P78332 1123 aaKnown RBP25.87■■□□□ 1.73
AUP1-201ENST00000377526 CDCA7Q9BWT1 371 aaPredicted RBP25.87■■□□□ 1.73
AUP1-201ENST00000377526 MAPK8IP3Q9UPT6 1336 aa25.87■■□□□ 1.73
AUP1-201ENST00000377526 ONECUT3O60422 494 aaPredicted RBP25.86■■□□□ 1.73
AUP1-201ENST00000377526 MTHFSDQ2M296 383 aaKnown RBP25.86■■□□□ 1.73
AUP1-201ENST00000377526 TNS2Q63HR2 1409 aa25.85■■□□□ 1.73
AUP1-201ENST00000377526 SENP3-EIF4A1A0A087X0R7 540 aa25.85■■□□□ 1.73
AUP1-201ENST00000377526 DLG5Q8TDM6 1919 aa25.84■■□□□ 1.73
AUP1-201ENST00000377526 PLEKHO1Q53GL0 409 aaPredicted RBP25.84■■□□□ 1.73
AUP1-201ENST00000377526 ZCRB1Q8TBF4 217 aaKnown RBP25.83■■□□□ 1.73
AUP1-201ENST00000377526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.83■■□□□ 1.738e-9■■□□□ 13
AUP1-201ENST00000377526 APAF1O14727 1248 aa25.83■■□□□ 1.73
AUP1-201ENST00000377526 NEFMP07197 916 aa25.83■■□□□ 1.73
AUP1-201ENST00000377526 RXRBP28702 533 aa25.83■■□□□ 1.73
AUP1-201ENST00000377526 AMOTQ4VCS5 1084 aa25.83■■□□□ 1.73
AUP1-201ENST00000377526 SPG7Q9UQ90 795 aa25.82■■□□□ 1.72
AUP1-201ENST00000377526 A0A0G2JS52 829 aa25.81■■□□□ 1.72
AUP1-201ENST00000377526 MYT1Q01538 1121 aa25.81■■□□□ 1.72
AUP1-201ENST00000377526 DDB1Q16531 1140 aa25.81■■□□□ 1.72
AUP1-201ENST00000377526 RRP7AQ9Y3A4 280 aaKnown RBP25.81■■□□□ 1.72
AUP1-201ENST00000377526 BRWD3Q6RI45 1802 aa25.81■■□□□ 1.72
AUP1-201ENST00000377526 EXOC5O00471 708 aa25.8■■□□□ 1.72
AUP1-201ENST00000377526 NFE2L2Q16236 605 aa25.8■■□□□ 1.72
AUP1-201ENST00000377526 ZNF530Q6P9A1 599 aaPredicted RBP25.8■■□□□ 1.72
AUP1-201ENST00000377526 SEPT12Q8IYM1 358 aa25.8■■□□□ 1.72
AUP1-201ENST00000377526 CYP27B1O15528 508 aa25.8■■□□□ 1.72
AUP1-201ENST00000377526 TMPOP42166 694 aaKnown RBP25.8■■□□□ 1.72
AUP1-201ENST00000377526 GAS2L2Q8NHY3 880 aa25.8■■□□□ 1.72
AUP1-201ENST00000377526 RGS12O14924 1447 aa25.79■■□□□ 1.72
AUP1-201ENST00000377526 PCDH11XQ9BZA7 1347 aa25.78■■□□□ 1.72
AUP1-201ENST00000377526 PCDH11YQ9BZA8 1340 aa25.78■■□□□ 1.72
AUP1-201ENST00000377526 PHKG2P15735 406 aa25.77■■□□□ 1.72
AUP1-201ENST00000377526 NEUROD2Q15784 382 aa25.77■■□□□ 1.72
AUP1-201ENST00000377526 DDX54Q8TDD1 881 aaKnown RBP25.77■■□□□ 1.72
AUP1-201ENST00000377526 VIRMAQ69YN4 1812 aaKnown RBP25.75■■□□□ 1.71
AUP1-201ENST00000377526 MAP3K5Q99683 1374 aa25.75■■□□□ 1.71
AUP1-201ENST00000377526 RIPK4P57078 832 aa25.74■■□□□ 1.71
AUP1-201ENST00000377526 AKAP4Q5JQC9 854 aa25.74■■□□□ 1.71
AUP1-201ENST00000377526 IFNL2Q8IZJ0 200 aa25.74■■□□□ 1.71
AUP1-201ENST00000377526 MARCH10Q8NA82 808 aaPredicted RBP25.74■■□□□ 1.71
AUP1-201ENST00000377526 C1orf141Q5JVX7 400 aa25.74■■□□□ 1.71
AUP1-201ENST00000377526 ADAMTS7Q9UKP4 1686 aa25.73■■□□□ 1.71
AUP1-201ENST00000377526 SALL2Q9Y467 1007 aaPredicted RBP25.72■■□□□ 1.71
AUP1-201ENST00000377526 GNAT3A8MTJ3 354 aa25.71■■□□□ 1.71
AUP1-201ENST00000377526 TRIM35Q9UPQ4 493 aa25.71■■□□□ 1.71
AUP1-201ENST00000377526 TOGARAM1Q9Y4F4 1720 aa25.71■■□□□ 1.71
AUP1-201ENST00000377526 KDM6AO15550 1401 aaPredicted RBP25.71■■□□□ 1.71
AUP1-201ENST00000377526 SCN11AQ9UI33 1791 aa25.71■■□□□ 1.71
AUP1-201ENST00000377526 PDE3BQ13370 1112 aa25.71■■□□□ 1.71
AUP1-201ENST00000377526 HNRNPUQ00839 825 aaKnown RBP eCLIP25.7■■□□□ 1.7
AUP1-201ENST00000377526 DCTN1Q14203 1278 aa25.69■■□□□ 1.7
AUP1-201ENST00000377526 NKX1-1Q15270 411 aaPredicted RBP25.69■■□□□ 1.7
AUP1-201ENST00000377526 MPRIPQ6WCQ1 1025 aa25.69■■□□□ 1.7
AUP1-201ENST00000377526 FAM182BQ5T319 152 aa25.68■■□□□ 1.7
AUP1-201ENST00000377526 MCM10Q7L590 875 aa25.68■■□□□ 1.7
AUP1-201ENST00000377526 LGR6Q9HBX8 967 aa25.68■■□□□ 1.7
AUP1-201ENST00000377526 DOT1LQ8TEK3 1739 aa25.67■■□□□ 1.7
AUP1-201ENST00000377526 EP400Q96L91 3159 aa25.67■■□□□ 1.7
AUP1-201ENST00000377526 KRT27Q7Z3Y8 459 aa25.67■■□□□ 1.7
AUP1-201ENST00000377526 IL17REQ8NFR9 667 aa25.67■■□□□ 1.7
AUP1-201ENST00000377526 THUMPD2Q9BTF0 503 aaKnown RBP25.67■■□□□ 1.7
AUP1-201ENST00000377526 HTATSF1O43719 755 aaKnown RBP25.66■■□□□ 1.7
AUP1-201ENST00000377526 CCDC27Q2M243 656 aa25.66■■□□□ 1.7
AUP1-201ENST00000377526 NCBP3Q53F19 620 aaKnown RBP25.66■■□□□ 1.7
AUP1-201ENST00000377526 RNMTO43148 476 aaKnown RBP25.65■■□□□ 1.7
AUP1-201ENST00000377526 HSP90AB1P08238 724 aaKnown RBP25.65■■□□□ 1.7
AUP1-201ENST00000377526 RTF1Q92541 710 aaKnown RBP25.65■■□□□ 1.7
AUP1-201ENST00000377526 DCAF5Q96JK2 942 aa25.65■■□□□ 1.7
AUP1-201ENST00000377526 LMOD3Q0VAK6 560 aa25.64■■□□□ 1.7
AUP1-201ENST00000377526 YTHDC1Q96MU7 727 aaKnown RBP25.64■■□□□ 1.7
AUP1-201ENST00000377526 CEMIPQ8WUJ3 1361 aa25.64■■□□□ 1.7
AUP1-201ENST00000377526 WWC1Q8IX03 1113 aa25.64■■□□□ 1.69
AUP1-201ENST00000377526 NGEFQ8N5V2 710 aa25.63■■□□□ 1.69
AUP1-201ENST00000377526 SIPA1L3O60292 1781 aaPredicted RBP25.62■■□□□ 1.69
AUP1-201ENST00000377526 ITGB4P16144 1822 aa25.62■■□□□ 1.69
AUP1-201ENST00000377526 MRC1P22897 1456 aa25.62■■□□□ 1.69
AUP1-201ENST00000377526 ZNF521Q96K83 1311 aa25.62■■□□□ 1.69
AUP1-201ENST00000377526 SBF2Q86WG5 1849 aa25.61■■□□□ 1.69
AUP1-201ENST00000377526 BCL9O00512 1426 aa25.61■■□□□ 1.69
AUP1-201ENST00000377526 KAT6BQ8WYB5 2073 aa25.58■■□□□ 1.69
AUP1-201ENST00000377526 ACSBG1Q96GR2 724 aa25.58■■□□□ 1.68
AUP1-201ENST00000377526 NHSQ6T4R5 1651 aa25.58■■□□□ 1.68
AUP1-201ENST00000377526 ZBED9Q6R2W3 1325 aa25.57■■□□□ 1.68
AUP1-201ENST00000377526 ERVV-2B6SEH9 535 aa25.57■■□□□ 1.68
AUP1-201ENST00000377526 SLC52A2Q9HAB3 445 aa25.56■■□□□ 1.68
AUP1-201ENST00000377526 PRIM1P49642 420 aaKnown RBP25.55■■□□□ 1.68
AUP1-201ENST00000377526 TEFQ10587 303 aa25.55■■□□□ 1.68
AUP1-201ENST00000377526 KCNQ2O43526 872 aa25.54■■□□□ 1.68
AUP1-201ENST00000377526 FAM196AQ6ZSG2 479 aa25.54■■□□□ 1.68
AUP1-201ENST00000377526 WDR63Q8IWG1 891 aa25.54■■□□□ 1.68
AUP1-201ENST00000377526 NFATC2IPQ8NCF5 419 aa25.54■■□□□ 1.68
AUP1-201ENST00000377526 CABP4P57796 275 aa25.53■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms