RNA–Protein interactions for RNA: ENST00000376020.6

SHROOM4-202, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SHROOM4, Length 9,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-202ENST00000376020 AXDND1Q5T1B0 1012 aaPredicted RBP10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 TRIM22Q8IYM9 498 aa10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 UPF3BQ9BZI7 483 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 ATL3Q6DD88 541 aa10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 PHAXQ9H814 394 aaKnown RBP10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 NPHP1O15259 732 aa10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 RNF123Q5XPI4 1314 aa10.36□□□□□ -0.75
SHROOM4-202ENST00000376020 SOS1Q07889 1333 aaPredicted RBP10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 ZNF692Q9BU19 519 aaPredicted RBP10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 FIBPO43427 364 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 TBC1D2Q9BYX2 928 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 CACNA1FO60840 1977 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 STK38Q15208 465 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 TUBB2AQ13885 445 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 SMC5Q8IY18 1101 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 CCDC148Q8NFR7 591 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 TUBB2BQ9BVA1 445 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 KIF1BO60333 1816 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 TMX4Q9H1E5 349 aaPredicted RBP10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 MAGEC2Q9UBF1 373 aaPredicted RBP10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 CEP131Q9UPN4 1083 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 LARP1BQ659C4 914 aaKnown RBP10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 NOL8Q76FK4 1167 aaKnown RBP10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 MTHFSP49914 203 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 GGT6Q6P531 493 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 LRSAM1Q6UWE0 723 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 HMG20BQ9P0W2 317 aa10.35□□□□□ -0.75
SHROOM4-202ENST00000376020 KIF5CO60282 957 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 ARHGAP29Q52LW3 1261 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 ZSCAN25Q6NSZ9 544 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 ZSCAN16Q9H4T2 348 aaPredicted RBP10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 DDX12PQ92771 950 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 TNPO1Q92973 898 aaKnown RBP10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 ZMYND15Q9H091 742 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 MRC2Q9UBG0 1479 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 TWISTNBQ3B726 338 aaPredicted RBP10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 GLRX3O76003 335 aaKnown RBP10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 STX1AQ16623 288 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 TTC5Q8N0Z6 440 aa10.34□□□□□ -0.75
SHROOM4-202ENST00000376020 MYO1BO43795 1136 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 SYCE3A1L190 88 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 SERPINC1P01008 464 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 BLOC1S2Q6QNY1 142 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 NGDNQ8NEJ9 315 aaKnown RBP10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 NOL7Q9UMY1 257 aaKnown RBP10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 SLC3A2P08195 630 aaKnown RBP10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 HMGB2P26583 209 aaKnown RBP10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 EPS15P42566 896 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 RARSP54136 660 aaKnown RBP10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 AMER1Q5JTC6 1135 aaPredicted RBP10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 GIMAP7Q8NHV1 300 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 STK26Q9P289 416 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 TRAK1Q9UPV9 953 aa10.33□□□□□ -0.76
SHROOM4-202ENST00000376020 KANK3Q6NY19 840 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 FAM200AQ8TCP9 573 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 CFAP65Q6ZU64 1925 aaKnown RBP10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 ME1P48163 572 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 SLC26A8Q96RN1 970 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 ARFGAP3Q9NP61 516 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 ZNF397Q8NF99 534 aaPredicted RBP10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 PCMTD1Q96MG8 357 aaPredicted RBP10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 CHMP3Q9Y3E7 222 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 CCDC196A0A1B0GTZ2 297 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 PLXNC1O60486 1568 aa10.32□□□□□ -0.76
SHROOM4-202ENST00000376020 FMNL2Q96PY5 1086 aa10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 U3KPZ7 1027 aaPredicted RBP10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 NAA15Q9BXJ9 866 aaKnown RBP10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 LIMCH1Q9UPQ0 1083 aa10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 GBP2P32456 591 aaPredicted RBP10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 SH3BGRP55822 239 aaPredicted RBP10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 FOXD4L5Q5VV16 416 aaPredicted RBP10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 FOXD4L4Q8WXT5 416 aaPredicted RBP10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 CDCA7LQ96GN5 454 aa10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 TSPYL4Q9UJ04 414 aa10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 TBC1D2BQ9UPU7 963 aa10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 FGFR1OPO95684 399 aaKnown RBP10.31□□□□□ -0.76
SHROOM4-202ENST00000376020 RAD54L2Q9Y4B4 1467 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 BAG4O95429 457 aaKnown RBP10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 XRCC6P12956 609 aaKnown RBP eCLIP10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 DUSP27Q5VZP5 1158 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 AEBP2Q6ZN18 517 aaPredicted RBP10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 GOLIM4O00461 696 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 MARCH6O60337 910 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 POLR3AO14802 1390 aaPredicted RBP10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 ANKRD36BQ8N2N9 1353 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 BLMP54132 1417 aaPredicted RBP10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 NPHP3Q7Z494 1330 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 FSD1Q9BTV5 496 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 OGFRQ9NZT2 677 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 ELP1O95163 1332 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 EZRP15311 586 aaKnown RBP10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 RAB3GAP1Q15042 981 aa10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 NOB1Q9ULX3 412 aaKnown RBP10.3□□□□□ -0.76
SHROOM4-202ENST00000376020 BMP15O95972 392 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 KIF1BPQ96EK5 621 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 ZFYVE9O95405 1425 aa10.29□□□□□ -0.76
SHROOM4-202ENST00000376020 CCDC181Q5TID7 509 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms