RNA–Protein interactions for RNA: ENST00000375025.10

CCDC7-204, Transcript of coiled-coil domain containing 7, humanhuman

TSL 2

Gene CCDC7, Length 2,729 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-204ENST00000375025 TMEM151AQ8N4L1 468 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 PTPRGP23470 1445 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 PTPRKQ15262 1439 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 MOXD2PA6NHM9 499 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 RNF225M0QZC1 329 aaPredicted RBP3.74□□□□□ -1.81
CCDC7-204ENST00000375025 NR3C2P08235 984 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 SLURP2P0DP57 97 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 RASSF7Q02833 373 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 C4orf48Q5BLP8 95 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 UHRF1BP1Q6BDS2 1440 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 CD109Q6YHK3 1445 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 SH3RF1Q7Z6J0 888 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 KCTD17Q8N5Z5 321 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 ABCA9Q8IUA7 1624 aa3.74□□□□□ -1.81
CCDC7-204ENST00000375025 SOBPA7XYQ1 873 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 SPTLC1O15269 473 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 ARHGEF15O94989 841 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 IGHA1P01876 353 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 SSTR3P32745 418 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-204ENST00000375025 PRPF38BQ5VTL8 546 aaKnown RBP3.73□□□□□ -1.81
CCDC7-204ENST00000375025 RGS17Q9UGC6 210 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-204ENST00000375025 KIAA0556O60303 1618 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 EFCAB5A4FU69 1503 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 ZIC2O95409 532 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-204ENST00000375025 NDUFV2P19404 249 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 RSBN1LQ6PCB5 846 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-204ENST00000375025 LINC00528Q8N1L1 170 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 ITPKCQ96DU7 683 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 ZFAND3Q9H8U3 227 aa3.73□□□□□ -1.81
CCDC7-204ENST00000375025 ZNF142P52746 1687 aaPredicted RBP3.73□□□□□ -1.81
CCDC7-204ENST00000375025 TCOF1Q13428 1488 aaKnown RBP3.72□□□□□ -1.81
CCDC7-204ENST00000375025 GPR161Q8N6U8 529 aaKnown RBP3.72□□□□□ -1.81
CCDC7-204ENST00000375025 FOXJ1Q92949 421 aa3.72□□□□□ -1.81
CCDC7-204ENST00000375025 DNMT3LQ9UJW3 386 aa3.72□□□□□ -1.81
CCDC7-204ENST00000375025 ZNF385CQ66K41 422 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-204ENST00000375025 ADAMTS8Q9UP79 889 aa3.72□□□□□ -1.81
CCDC7-204ENST00000375025 DNMT3AQ9Y6K1 912 aaPredicted RBP3.72□□□□□ -1.81
CCDC7-204ENST00000375025 NPATQ14207 1427 aa3.72□□□□□ -1.81
CCDC7-204ENST00000375025 AKNAQ7Z591 1439 aa3.72□□□□□ -1.81
CCDC7-204ENST00000375025 CFAP99D6REC4 459 aa3.72□□□□□ -1.81
CCDC7-204ENST00000375025 DIXDC1Q155Q3 683 aa3.72□□□□□ -1.81
CCDC7-204ENST00000375025 RICTORQ6R327 1708 aa3.71□□□□□ -1.81
CCDC7-204ENST00000375025 CARMIL2Q6F5E8 1435 aa3.71□□□□□ -1.81
CCDC7-204ENST00000375025 CFAP74Q9C0B2 1584 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 GDF11O95390 407 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 FOXK2Q01167 660 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 SH3BP5LQ7L8J4 393 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 SLC35F4A4IF30 521 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 MAN1A2O60476 641 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 HSPA2P54652 639 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.71□□□□□ -1.82
CCDC7-204ENST00000375025 BARGINQ6ZT62 677 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 Q6ZVU0 165 aa3.71□□□□□ -1.82
CCDC7-204ENST00000375025 TSEN34Q9BSV6 310 aaKnown RBP3.71□□□□□ -1.82
CCDC7-204ENST00000375025 AGLP35573 1532 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 BIVM-ERCC5R4GMW8 1640 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 HSPA1LP34931 641 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 BPHLQ86WA6 291 aaPredicted RBP3.7□□□□□ -1.82
CCDC7-204ENST00000375025 GPKOWQ92917 476 aaPredicted RBP eCLIP3.7□□□□□ -1.82
CCDC7-204ENST00000375025 SYNMO15061 1565 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 MROH2AA6NES4 1674 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 NHSL1Q5SYE7 1610 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 RAPGEF2Q9Y4G8 1499 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 KANK3Q6NY19 840 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 ARMC2Q8NEN0 867 aa3.7□□□□□ -1.82
CCDC7-204ENST00000375025 SPINT1O43278 529 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 TBC1D2Q9BYX2 928 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 ZBTB3Q9H5J0 574 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 MAP10Q9P2G4 905 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 EMILIN1Q9Y6C2 1016 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 UGGT2Q9NYU1 1516 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 WRNQ14191 1432 aaPredicted RBP eCLIP3.69□□□□□ -1.82
CCDC7-204ENST00000375025 UBAP1LF5GYI3 381 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 HRCP23327 699 aa3.69□□□□□ -1.82
CCDC7-204ENST00000375025 RNF17Q9BXT8 1623 aaKnown RBP3.69□□□□□ -1.82
CCDC7-204ENST00000375025 TOM1O60784 492 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 ZMYND10O75800 440 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 UPP2O95045 317 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 BMP2P12643 396 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 PTSQ03393 145 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 TRIM26Q12899 539 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-204ENST00000375025 GIGYF2Q6Y7W6 1299 aaKnown RBP3.68□□□□□ -1.82
CCDC7-204ENST00000375025 DHX30Q7L2E3 1194 aaKnown RBP eCLIP3.68□□□□□ -1.82
CCDC7-204ENST00000375025 COL25A1Q9BXS0 654 aaPredicted RBP3.68□□□□□ -1.82
CCDC7-204ENST00000375025 PCDHB15Q9Y5E8 787 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 TRAPPC8Q9Y2L5 1435 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 RNFT1Q5M7Z0 435 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 C6orf118Q5T5N4 469 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 CNTNAP3BQ96NU0 1288 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 CNTNAP3Q9BZ76 1288 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 ZFYVE16Q7Z3T8 1539 aa3.68□□□□□ -1.82
CCDC7-204ENST00000375025 ABCA8O94911 1581 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 XP32Q5T750 250 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 CCDC155Q8N6L0 562 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 SIGLEC1Q9BZZ2 1709 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 CNTLNQ9NXG0 1405 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 TTLL8A6PVC2 850 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 LILRB3O75022 631 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 CTHP32929 405 aa3.67□□□□□ -1.82
CCDC7-204ENST00000375025 CCDC116Q8IYX3 515 aa3.67□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms