RNA–Protein interactions for RNA: ENST00000374982.5

HLA-DRA-201, Transcript of major histocompatibility complex, class II, DR alpha, humanhuman

BASIC

Gene HLA-DRA, Length 1,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRA-201ENST00000374982 SOX12O15370 315 aa14.92□□□□□ -0.02
HLA-DRA-201ENST00000374982 IL2RBP14784 551 aa14.92□□□□□ -0.02
HLA-DRA-201ENST00000374982 KIAA1551Q9HCM1 1747 aa14.92□□□□□ -0.02
HLA-DRA-201ENST00000374982 TNRC6CQ9HCJ0 1690 aaKnown RBP14.91□□□□□ -0.02
HLA-DRA-201ENST00000374982 PPARGC1BQ86YN6 1023 aaKnown RBP14.91□□□□□ -0.02
HLA-DRA-201ENST00000374982 CCNL1Q9UK58 526 aaPredicted RBP14.91□□□□□ -0.02
HLA-DRA-201ENST00000374982 N4BP2Q86UW6 1770 aaPredicted RBP14.9□□□□□ -0.02
HLA-DRA-201ENST00000374982 NSD2O96028 1365 aa14.9□□□□□ -0.02
HLA-DRA-201ENST00000374982 FAM161AQ3B820 660 aa14.9□□□□□ -0.02
HLA-DRA-201ENST00000374982 SYTL4Q96C24 671 aaPredicted RBP14.9□□□□□ -0.02
HLA-DRA-201ENST00000374982 KCNH5Q8NCM2 988 aa14.89□□□□□ -0.03
HLA-DRA-201ENST00000374982 NLRP2Q9NX02 1062 aa14.89□□□□□ -0.03
HLA-DRA-201ENST00000374982 KIF13BQ9NQT8 1826 aa14.89□□□□□ -0.03
HLA-DRA-201ENST00000374982 TOGARAM1Q9Y4F4 1720 aa14.89□□□□□ -0.03
HLA-DRA-201ENST00000374982 LTN1O94822 1766 aa14.88□□□□□ -0.03
HLA-DRA-201ENST00000374982 ANKRD36BQ8N2N9 1353 aa14.88□□□□□ -0.03
HLA-DRA-201ENST00000374982 KCPQ6ZWJ8 1503 aa14.88□□□□□ -0.03
HLA-DRA-201ENST00000374982 ADRA2BP18089 450 aa14.88□□□□□ -0.03
HLA-DRA-201ENST00000374982 PRIM1P49642 420 aaKnown RBP14.88□□□□□ -0.03
HLA-DRA-201ENST00000374982 C10orf71Q711Q0 1435 aa14.87□□□□□ -0.03
HLA-DRA-201ENST00000374982 SRPK2P78362 688 aaKnown RBP14.87□□□□□ -0.03
HLA-DRA-201ENST00000374982 KDM2AQ9Y2K7 1162 aa14.87□□□□□ -0.03
HLA-DRA-201ENST00000374982 ERBB3P21860 1342 aa14.87□□□□□ -0.03
HLA-DRA-201ENST00000374982 DDX54Q8TDD1 881 aaKnown RBP14.86□□□□□ -0.03
HLA-DRA-201ENST00000374982 UBR3Q6ZT12 1888 aa14.86□□□□□ -0.03
HLA-DRA-201ENST00000374982 KIAA1210Q9ULL0 1709 aa14.86□□□□□ -0.03
HLA-DRA-201ENST00000374982 PXDNLA1KZ92 1463 aa14.85□□□□□ -0.03
HLA-DRA-201ENST00000374982 CABP2Q9NPB3 220 aa14.85□□□□□ -0.03
HLA-DRA-201ENST00000374982 PLEKHG2Q9H7P9 1386 aa14.85□□□□□ -0.03
HLA-DRA-201ENST00000374982 BRCA1P38398 1863 aaKnown RBP14.84□□□□□ -0.03
HLA-DRA-201ENST00000374982 C4BP0C0L5 1744 aa14.84□□□□□ -0.03
HLA-DRA-201ENST00000374982 SMC1BQ8NDV3 1235 aa14.84□□□□□ -0.03
HLA-DRA-201ENST00000374982 FLAD1Q8NFF5 587 aa14.84□□□□□ -0.03
HLA-DRA-201ENST00000374982 ARHGAP27Q6ZUM4 889 aa14.83□□□□□ -0.04
HLA-DRA-201ENST00000374982 CABP1Q9NZU7 370 aa14.83□□□□□ -0.04
HLA-DRA-201ENST00000374982 DCAF11Q8TEB1 546 aa14.82□□□□□ -0.04
HLA-DRA-201ENST00000374982 RRAGCQ9HB90 399 aa14.82□□□□□ -0.04
HLA-DRA-201ENST00000374982 BCS1LQ9Y276 419 aa14.82□□□□□ -0.04
HLA-DRA-201ENST00000374982 KDM2BQ8NHM5 1336 aa14.82□□□□□ -0.04
HLA-DRA-201ENST00000374982 ARFGEF1Q9Y6D6 1849 aa14.82□□□□□ -0.04
HLA-DRA-201ENST00000374982 USP47Q96K76 1375 aa14.82□□□□□ -0.04
HLA-DRA-201ENST00000374982 C9orf131Q5VYM1 1079 aa14.81□□□□□ -0.04
HLA-DRA-201ENST00000374982 FAM208AQ9UK61 1670 aaKnown RBP14.81□□□□□ -0.04
HLA-DRA-201ENST00000374982 AMIGO3Q86WK7 504 aa14.8□□□□□ -0.04
HLA-DRA-201ENST00000374982 TTC21BQ7Z4L5 1316 aa14.8□□□□□ -0.04
HLA-DRA-201ENST00000374982 SMIM5Q71RC9 77 aa14.79□□□□□ -0.04
HLA-DRA-201ENST00000374982 ANKRD24Q8TF21 1146 aa14.79□□□□□ -0.04
HLA-DRA-201ENST00000374982 SBF1O95248 1867 aa14.78□□□□□ -0.04
HLA-DRA-201ENST00000374982 FOXN1O15353 648 aa14.78□□□□□ -0.04
HLA-DRA-201ENST00000374982 PRDM10Q9NQV6 1147 aa14.78□□□□□ -0.04
HLA-DRA-201ENST00000374982 PHF14O94880 888 aa14.77□□□□□ -0.05
HLA-DRA-201ENST00000374982 TTC21AQ8NDW8 1320 aa14.76□□□□□ -0.05
HLA-DRA-201ENST00000374982 A0A0G2JLW4 131 aa14.75□□□□□ -0.05
HLA-DRA-201ENST00000374982 MLLT1Q03111 559 aaPredicted RBP14.75□□□□□ -0.05
HLA-DRA-201ENST00000374982 AK7Q96M32 723 aa14.75□□□□□ -0.05
HLA-DRA-201ENST00000374982 RGPD2P0DJD1 1756 aa14.75□□□□□ -0.05
HLA-DRA-201ENST00000374982 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.74□□□□□ -0.05
HLA-DRA-201ENST00000374982 FCHSD2O94868 740 aa14.74□□□□□ -0.05
HLA-DRA-201ENST00000374982 TGFB2P61812 414 aa14.74□□□□□ -0.05
HLA-DRA-201ENST00000374982 ABHD8Q96I13 439 aa14.74□□□□□ -0.05
HLA-DRA-201ENST00000374982 MON2Q7Z3U7 1717 aa14.74□□□□□ -0.05
HLA-DRA-201ENST00000374982 NSD3Q9BZ95 1437 aa14.74□□□□□ -0.05
HLA-DRA-201ENST00000374982 STAC3Q96MF2 364 aa14.73□□□□□ -0.05
HLA-DRA-201ENST00000374982 RNF181Q9P0P0 153 aa14.73□□□□□ -0.05
HLA-DRA-201ENST00000374982 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
HLA-DRA-201ENST00000374982 CENPJQ9HC77 1338 aaPredicted RBP14.72□□□□□ -0.05
HLA-DRA-201ENST00000374982 DPEP1P16444 411 aa14.71□□□□□ -0.05
HLA-DRA-201ENST00000374982 HMGB2P26583 209 aaKnown RBP14.71□□□□□ -0.05
HLA-DRA-201ENST00000374982 ZNF692Q9BU19 519 aaPredicted RBP14.71□□□□□ -0.05
HLA-DRA-201ENST00000374982 MKRN1Q9UHC7 482 aaKnown RBP14.71□□□□□ -0.05
HLA-DRA-201ENST00000374982 ITGB4P16144 1822 aa14.71□□□□□ -0.06
HLA-DRA-201ENST00000374982 MMP10P09238 476 aa14.7□□□□□ -0.06
HLA-DRA-201ENST00000374982 CTCFP49711 727 aaPredicted RBP14.7□□□□□ -0.06
HLA-DRA-201ENST00000374982 MEGF6O75095 1541 aa14.7□□□□□ -0.06
HLA-DRA-201ENST00000374982 SSFA2P28290 1259 aa14.69□□□□□ -0.06
HLA-DRA-201ENST00000374982 ZCRB1Q8TBF4 217 aaKnown RBP14.69□□□□□ -0.06
HLA-DRA-201ENST00000374982 C4AP0C0L4 1744 aa14.69□□□□□ -0.06
HLA-DRA-201ENST00000374982 MAP2P11137 1827 aaKnown RBP14.69□□□□□ -0.06
HLA-DRA-201ENST00000374982 VIRMAQ69YN4 1812 aaKnown RBP14.69□□□□□ -0.06
HLA-DRA-201ENST00000374982 RGS19P49795 217 aa14.68□□□□□ -0.06
HLA-DRA-201ENST00000374982 TIAM2Q8IVF5 1701 aa14.68□□□□□ -0.06
HLA-DRA-201ENST00000374982 USP31Q70CQ4 1352 aa14.68□□□□□ -0.06
HLA-DRA-201ENST00000374982 VEGFAP15692 232 aaPredicted RBP14.67□□□□□ -0.06
HLA-DRA-201ENST00000374982 AIDAQ96BJ3 306 aa14.67□□□□□ -0.06
HLA-DRA-201ENST00000374982 KTN1Q86UP2 1357 aaKnown RBP14.67□□□□□ -0.06
HLA-DRA-201ENST00000374982 LBX1P52954 281 aa14.66□□□□□ -0.06
HLA-DRA-201ENST00000374982 NBPF1Q3BBV0 1214 aa14.66□□□□□ -0.06
HLA-DRA-201ENST00000374982 LTV1Q96GA3 475 aaPredicted RBP14.66□□□□□ -0.06
HLA-DRA-201ENST00000374982 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
HLA-DRA-201ENST00000374982 CREBZFQ9NS37 354 aa14.66□□□□□ -0.06
HLA-DRA-201ENST00000374982 KCNA3P22001 575 aa14.65□□□□□ -0.06
HLA-DRA-201ENST00000374982 CCDC88AQ3V6T2 1871 aa14.65□□□□□ -0.06
HLA-DRA-201ENST00000374982 CNTNAP1P78357 1384 aa14.64□□□□□ -0.07
HLA-DRA-201ENST00000374982 CCDC85CA6NKD9 419 aa14.64□□□□□ -0.07
HLA-DRA-201ENST00000374982 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.64□□□□□ -0.07
HLA-DRA-201ENST00000374982 NME9Q86XW9 330 aa14.63□□□□□ -0.07
HLA-DRA-201ENST00000374982 LINC00116Q8NCU8 138 aa14.63□□□□□ -0.07
HLA-DRA-201ENST00000374982 CCDC87Q9NVE4 849 aa14.63□□□□□ -0.07
HLA-DRA-201ENST00000374982 EVC2Q86UK5 1308 aa14.63□□□□□ -0.07
HLA-DRA-201ENST00000374982 ZC3H4Q9UPT8 1303 aaKnown RBP14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms