RNA–Protein interactions for RNA: ENST00000374617.8

WDR46-231, Transcript of WD repeat domain 46, human

APPRIS P1 TSL 1 (best) BASIC

Gene WDR46, Length 2,358 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
WDR46-231	ENST00000374617	NUDC	Q9Y266	331 aa		18.48	■□□□□ 0.55
WDR46-231	ENST00000374617	BCLAF1	Q9NYF8	920 aa	Known RBP eCLIP	18.48	■□□□□ 0.55
WDR46-231	ENST00000374617	RGPD1	P0DJD0	1748 aa		18.47	■□□□□ 0.55
WDR46-231	ENST00000374617	MEGF6	O75095	1541 aa		18.47	■□□□□ 0.55
WDR46-231	ENST00000374617	KDR	P35968	1356 aa		18.47	■□□□□ 0.55
WDR46-231	ENST00000374617	CCDC125	Q86Z20	511 aa		18.47	■□□□□ 0.55
WDR46-231	ENST00000374617	CCDC184	Q52MB2	194 aa		18.46	■□□□□ 0.55
WDR46-231	ENST00000374617	MARCH10	Q8NA82	808 aa	Predicted RBP	18.46	■□□□□ 0.55
WDR46-231	ENST00000374617	BCL9	O00512	1426 aa		18.46	■□□□□ 0.55
WDR46-231	ENST00000374617	SULT6B1	Q6IMI4	303 aa		18.46	■□□□□ 0.55
WDR46-231	ENST00000374617	CCER2	I3L3R5	266 aa		18.45	■□□□□ 0.54
WDR46-231	ENST00000374617	SPG7	Q9UQ90	795 aa		18.45	■□□□□ 0.54
WDR46-231	ENST00000374617	UPF1	Q92900	1129 aa	Known RBP eCLIP	18.44	■□□□□ 0.54
WDR46-231	ENST00000374617	U2SURP	O15042	1029 aa	Known RBP	18.43	■□□□□ 0.54
WDR46-231	ENST00000374617	AMOT	Q4VCS5	1084 aa		18.42	■□□□□ 0.54
WDR46-231	ENST00000374617	FAM182B	Q5T319	152 aa		18.42	■□□□□ 0.54
WDR46-231	ENST00000374617	PCDH11X	Q9BZA7	1347 aa		18.42	■□□□□ 0.54
WDR46-231	ENST00000374617	PCDH11Y	Q9BZA8	1340 aa		18.42	■□□□□ 0.54
WDR46-231	ENST00000374617	EP400	Q96L91	3159 aa		18.42	■□□□□ 0.54
WDR46-231	ENST00000374617	AEBP1	Q8IUX7	1158 aa		18.42	■□□□□ 0.54
WDR46-231	ENST00000374617	DDX54	Q8TDD1	881 aa	Known RBP	18.42	■□□□□ 0.54
WDR46-231	ENST00000374617	PLEKHO1	Q53GL0	409 aa	Predicted RBP	18.41	■□□□□ 0.54
WDR46-231	ENST00000374617	PKD1L3	Q7Z443	1732 aa		18.4	■□□□□ 0.54
WDR46-231	ENST00000374617	HMOX1	P09601	288 aa		18.4	■□□□□ 0.54
WDR46-231	ENST00000374617	MRS2	Q9HD23	443 aa		18.4	■□□□□ 0.54
WDR46-231	ENST00000374617	FCHSD2	O94868	740 aa		18.39	■□□□□ 0.53
WDR46-231	ENST00000374617	U2AF1L5	P0DN76	240 aa	Predicted RBP	18.39	■□□□□ 0.53
WDR46-231	ENST00000374617	U2AF1	Q01081	240 aa	Known RBP eCLIP	18.39	■□□□□ 0.53
WDR46-231	ENST00000374617	SHANK3	Q9BYB0	1731 aa		18.38	■□□□□ 0.53
WDR46-231	ENST00000374617	IFNL2	Q8IZJ0	200 aa		18.38	■□□□□ 0.53
WDR46-231	ENST00000374617	CYP27B1	O15528	508 aa		18.37	■□□□□ 0.53
WDR46-231	ENST00000374617	SF3B2	Q13435	895 aa	Known RBP	18.37	■□□□□ 0.53
WDR46-231	ENST00000374617	NKX1-1	Q15270	411 aa	Predicted RBP	18.37	■□□□□ 0.53
WDR46-231	ENST00000374617	BCL11B	Q9C0K0	894 aa	Predicted RBP	18.36	■□□□□ 0.53
WDR46-231	ENST00000374617	PNN	Q9H307	717 aa	Known RBP	18.36	■□□□□ 0.53
WDR46-231	ENST00000374617	TRIM37	O94972	964 aa		18.35	■□□□□ 0.53
WDR46-231	ENST00000374617	RSPH6A	Q9H0K4	717 aa		18.35	■□□□□ 0.53
WDR46-231	ENST00000374617	HSP90AB1	P08238	724 aa	Known RBP	18.35	■□□□□ 0.53
WDR46-231	ENST00000374617	PHKG2	P15735	406 aa		18.35	■□□□□ 0.53
WDR46-231	ENST00000374617	SBF2	Q86WG5	1849 aa		18.34	■□□□□ 0.53
WDR46-231	ENST00000374617	ZNF530	Q6P9A1	599 aa	Predicted RBP	18.33	■□□□□ 0.53
WDR46-231	ENST00000374617	PNISR	Q8TF01	805 aa	Known RBP	18.33	■□□□□ 0.52
WDR46-231	ENST00000374617	PRKAR2B	P31323	418 aa		18.32	■□□□□ 0.52
WDR46-231	ENST00000374617	C1orf141	Q5JVX7	400 aa		18.32	■□□□□ 0.52
WDR46-231	ENST00000374617	BAG6	P46379	1132 aa		18.31	■□□□□ 0.52
WDR46-231	ENST00000374617	AKAP4	Q5JQC9	854 aa		18.31	■□□□□ 0.52
WDR46-231	ENST00000374617	GAS2L2	Q8NHY3	880 aa		18.31	■□□□□ 0.52
WDR46-231	ENST00000374617	DCAF5	Q96JK2	942 aa		18.31	■□□□□ 0.52
WDR46-231	ENST00000374617	NEFM	P07197	916 aa		18.3	■□□□□ 0.52
WDR46-231	ENST00000374617	WDR43	Q15061	677 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
WDR46-231	ENST00000374617	MTHFSD	Q2M296	383 aa	Known RBP	18.3	■□□□□ 0.52
WDR46-231	ENST00000374617	ACSBG1	Q96GR2	724 aa		18.3	■□□□□ 0.52
WDR46-231	ENST00000374617	NHS	Q6T4R5	1651 aa		18.3	■□□□□ 0.52
WDR46-231	ENST00000374617	APBA3	O96018	575 aa		18.3	■□□□□ 0.52
WDR46-231	ENST00000374617	KCNQ2	O43526	872 aa		18.29	■□□□□ 0.52
WDR46-231	ENST00000374617	PRIM1	P49642	420 aa	Known RBP	18.29	■□□□□ 0.52
WDR46-231	ENST00000374617	TNS1	Q9HBL0	1735 aa	Known RBP	18.29	■□□□□ 0.52
WDR46-231	ENST00000374617	PLSCR1	O15162	318 aa		18.28	■□□□□ 0.52
WDR46-231	ENST00000374617	PHACTR3	Q96KR7	559 aa		18.28	■□□□□ 0.52
WDR46-231	ENST00000374617	ERVV-2	B6SEH9	535 aa		18.28	■□□□□ 0.52
WDR46-231	ENST00000374617	FAM9B	Q8IZU0	186 aa		18.28	■□□□□ 0.52
WDR46-231	ENST00000374617	PLEKHF1	Q96S99	279 aa		18.28	■□□□□ 0.52
WDR46-231	ENST00000374617	SYTL4	Q96C24	671 aa	Predicted RBP	18.26	■□□□□ 0.51
WDR46-231	ENST00000374617	DOT1L	Q8TEK3	1739 aa		18.26	■□□□□ 0.51
WDR46-231	ENST00000374617	PTF1A	Q7RTS3	328 aa		18.26	■□□□□ 0.51
WDR46-231	ENST00000374617	KAT6B	Q8WYB5	2073 aa		18.25	■□□□□ 0.51
WDR46-231	ENST00000374617	ADAMTS8	Q9UP79	889 aa		18.25	■□□□□ 0.51
WDR46-231	ENST00000374617	GNAT3	A8MTJ3	354 aa		18.25	■□□□□ 0.51
WDR46-231	ENST00000374617	DEFB132	Q7Z7B7	95 aa		18.24	■□□□□ 0.51
WDR46-231	ENST00000374617	CAMKK2	Q96RR4	588 aa		18.24	■□□□□ 0.51
WDR46-231	ENST00000374617	MAPK8IP3	Q9UPT6	1336 aa		18.24	■□□□□ 0.51
WDR46-231	ENST00000374617	EN1	Q05925	392 aa	Predicted RBP	18.24	■□□□□ 0.51
WDR46-231	ENST00000374617	MPRIP	Q6WCQ1	1025 aa		18.24	■□□□□ 0.51
WDR46-231	ENST00000374617	HTATSF1	O43719	755 aa	Known RBP	18.23	■□□□□ 0.51
WDR46-231	ENST00000374617	TMOD3	Q9NYL9	352 aa		18.23	■□□□□ 0.51
WDR46-231	ENST00000374617	MAP3K5	Q99683	1374 aa		18.23	■□□□□ 0.51
WDR46-231	ENST00000374617	KDM6A	O15550	1401 aa	Predicted RBP	18.23	■□□□□ 0.51
WDR46-231	ENST00000374617	TOGARAM1	Q9Y4F4	1720 aa		18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	RGPD4	Q7Z3J3	1758 aa		18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	RNMT	O43148	476 aa	Known RBP	18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	RUNDC1	Q96C34	613 aa		18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	BTAF1	O14981	1849 aa		18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	CABP4	P57796	275 aa		18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	PIGB	Q92521	554 aa		18.22	■□□□□ 0.51
WDR46-231	ENST00000374617	ITGB4	P16144	1822 aa		18.21	■□□□□ 0.51
WDR46-231	ENST00000374617	NFE2L2	Q16236	605 aa		18.2	■□□□□ 0.5
WDR46-231	ENST00000374617	SMARCC1	Q92922	1105 aa	Predicted RBP	18.2	■□□□□ 0.5
WDR46-231	ENST00000374617	LGR6	Q9HBX8	967 aa		18.2	■□□□□ 0.5
WDR46-231	ENST00000374617	SCN11A	Q9UI33	1791 aa		18.2	■□□□□ 0.5
WDR46-231	ENST00000374617	ADAMTS7	Q9UKP4	1686 aa		18.2	■□□□□ 0.5
WDR46-231	ENST00000374617	EZH2	Q15910	746 aa	Known RBP	18.2	■□□□□ 0.5
WDR46-231	ENST00000374617	RTF1	Q92541	710 aa	Known RBP	18.19	■□□□□ 0.5
WDR46-231	ENST00000374617	HMGB2	P26583	209 aa	Known RBP	18.19	■□□□□ 0.5
WDR46-231	ENST00000374617	NFATC2IP	Q8NCF5	419 aa		18.18	■□□□□ 0.5
WDR46-231	ENST00000374617	IL17RE	Q8NFR9	667 aa		18.18	■□□□□ 0.5
WDR46-231	ENST00000374617	SLC52A2	Q9HAB3	445 aa		18.18	■□□□□ 0.5
WDR46-231	ENST00000374617	SLC27A3	Q5K4L6	730 aa		18.17	■□□□□ 0.5
WDR46-231	ENST00000374617	CEMIP	Q8WUJ3	1361 aa		18.17	■□□□□ 0.5
WDR46-231	ENST00000374617	TXNRD1	Q16881	649 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms