RNA–Protein interactions for RNA: ENST00000374339.4

PTPN20-202, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN20, Length 1,388 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-202ENST00000374339 RBM42Q9BTD8 480 aaKnown RBP12.66□□□□□ -0.38
PTPN20-202ENST00000374339 MYH16Q9H6N6 1097 aa12.66□□□□□ -0.38
PTPN20-202ENST00000374339 TRIM35Q9UPQ4 493 aa12.66□□□□□ -0.38
PTPN20-202ENST00000374339 COL5A2P05997 1499 aaPredicted RBP12.66□□□□□ -0.38
PTPN20-202ENST00000374339 POLA2Q14181 598 aa12.65□□□□□ -0.38
PTPN20-202ENST00000374339 TRMT2AQ8IZ69 625 aaKnown RBP12.65□□□□□ -0.38
PTPN20-202ENST00000374339 NLRP2Q9NX02 1062 aa12.65□□□□□ -0.38
PTPN20-202ENST00000374339 WDR17Q8IZU2 1322 aa12.64□□□□□ -0.39
PTPN20-202ENST00000374339 JCADQ9P266 1359 aa12.64□□□□□ -0.39
PTPN20-202ENST00000374339 AMOTQ4VCS5 1084 aa12.64□□□□□ -0.39
PTPN20-202ENST00000374339 DUSP27Q5VZP5 1158 aa12.64□□□□□ -0.39
PTPN20-202ENST00000374339 USHBP1Q8N6Y0 703 aa12.64□□□□□ -0.39
PTPN20-202ENST00000374339 HTATSF1O43719 755 aaKnown RBP12.63□□□□□ -0.39
PTPN20-202ENST00000374339 RTF1Q92541 710 aaKnown RBP12.63□□□□□ -0.39
PTPN20-202ENST00000374339 PARP4Q9UKK3 1724 aaKnown RBP12.62□□□□□ -0.39
PTPN20-202ENST00000374339 PLCH1Q4KWH8 1693 aa12.62□□□□□ -0.39
PTPN20-202ENST00000374339 FAM83GA6ND36 823 aa12.62□□□□□ -0.39
PTPN20-202ENST00000374339 EVA1CP58658 441 aa12.62□□□□□ -0.39
PTPN20-202ENST00000374339 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
PTPN20-202ENST00000374339 PLEKHO1Q53GL0 409 aaPredicted RBP12.62□□□□□ -0.39
PTPN20-202ENST00000374339 RAPGEF4Q8WZA2 1011 aa12.62□□□□□ -0.39
PTPN20-202ENST00000374339 MAP3K5Q99683 1374 aa12.61□□□□□ -0.39
PTPN20-202ENST00000374339 NEFLP07196 543 aa12.61□□□□□ -0.39
PTPN20-202ENST00000374339 NWD2Q9ULI1 1742 aa12.61□□□□□ -0.39
PTPN20-202ENST00000374339 GNAT3A8MTJ3 354 aa12.6□□□□□ -0.39
PTPN20-202ENST00000374339 TATP17735 454 aaPredicted RBP12.6□□□□□ -0.39
PTPN20-202ENST00000374339 GNAI1P63096 354 aa12.6□□□□□ -0.39
PTPN20-202ENST00000374339 TOM1L2Q6ZVM7 507 aa12.6□□□□□ -0.39
PTPN20-202ENST00000374339 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.6□□□□□ -0.39
PTPN20-202ENST00000374339 RCAN3Q9UKA8 241 aa12.6□□□□□ -0.39
PTPN20-202ENST00000374339 LRRC37A3O60309 1634 aa12.6□□□□□ -0.39
PTPN20-202ENST00000374339 SPATA31A6Q5VVP1 1343 aa12.6□□□□□ -0.39
PTPN20-202ENST00000374339 CRB1P82279 1406 aa12.59□□□□□ -0.39
PTPN20-202ENST00000374339 CT47B1P0C2W7 299 aaPredicted RBP12.59□□□□□ -0.39
PTPN20-202ENST00000374339 CARD10Q9BWT7 1032 aa12.59□□□□□ -0.39
PTPN20-202ENST00000374339 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
PTPN20-202ENST00000374339 BTG4Q9NY30 223 aa12.59□□□□□ -0.39
PTPN20-202ENST00000374339 SUPT16HQ9Y5B9 1047 aaKnown RBP12.59□□□□□ -0.39
PTPN20-202ENST00000374339 PKD1L3Q7Z443 1732 aa12.59□□□□□ -0.39
PTPN20-202ENST00000374339 AKAP4Q5JQC9 854 aa12.58□□□□□ -0.4
PTPN20-202ENST00000374339 C1orf141Q5JVX7 400 aa12.58□□□□□ -0.4
PTPN20-202ENST00000374339 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
PTPN20-202ENST00000374339 STRN4Q9NRL3 753 aa12.58□□□□□ -0.4
PTPN20-202ENST00000374339 SPG7Q9UQ90 795 aa12.58□□□□□ -0.4
PTPN20-202ENST00000374339 FANCIQ9NVI1 1328 aa12.58□□□□□ -0.4
PTPN20-202ENST00000374339 OVOS2A0A0G2JMS6 1433 aa12.58□□□□□ -0.4
PTPN20-202ENST00000374339 NUTM2BA6NNL0 878 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-202ENST00000374339 NUTM2EB1AL46 878 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-202ENST00000374339 ZNF530Q6P9A1 599 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-202ENST00000374339 NUTM2AQ8IVF1 878 aaPredicted RBP12.57□□□□□ -0.4
PTPN20-202ENST00000374339 NRAPQ86VF7 1730 aa12.57□□□□□ -0.4
PTPN20-202ENST00000374339 VIRMAQ69YN4 1812 aaKnown RBP12.57□□□□□ -0.4
PTPN20-202ENST00000374339 MEGF6O75095 1541 aa12.57□□□□□ -0.4
PTPN20-202ENST00000374339 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
PTPN20-202ENST00000374339 LARP1Q6PKG0 1096 aaKnown RBP12.56□□□□□ -0.4
PTPN20-202ENST00000374339 MCM10Q7L590 875 aa12.56□□□□□ -0.4
PTPN20-202ENST00000374339 GTF3C3Q9Y5Q9 886 aa12.56□□□□□ -0.4
PTPN20-202ENST00000374339 ZNF853P0CG23 659 aa12.56□□□□□ -0.4
PTPN20-202ENST00000374339 THUMPD2Q9BTF0 503 aaKnown RBP12.56□□□□□ -0.4
PTPN20-202ENST00000374339 LAS1LQ9Y4W2 734 aaKnown RBP12.56□□□□□ -0.4
PTPN20-202ENST00000374339 RNF123Q5XPI4 1314 aa12.55□□□□□ -0.4
PTPN20-202ENST00000374339 IL2RBP14784 551 aa12.55□□□□□ -0.4
PTPN20-202ENST00000374339 DCTN1Q14203 1278 aa12.55□□□□□ -0.4
PTPN20-202ENST00000374339 TSR2Q969E8 191 aaKnown RBP12.55□□□□□ -0.4
PTPN20-202ENST00000374339 BABAM1Q9NWV8 329 aa12.55□□□□□ -0.4
PTPN20-202ENST00000374339 CEMIPQ8WUJ3 1361 aa12.55□□□□□ -0.4
PTPN20-202ENST00000374339 SLIT2O94813 1529 aa12.54□□□□□ -0.4
PTPN20-202ENST00000374339 ADAMTS7Q9UKP4 1686 aa12.54□□□□□ -0.4
PTPN20-202ENST00000374339 WNK3Q9BYP7 1800 aa12.54□□□□□ -0.4
PTPN20-202ENST00000374339 CHL1O00533 1208 aa12.54□□□□□ -0.4
PTPN20-202ENST00000374339 HSPA1LP34931 641 aa12.54□□□□□ -0.4
PTPN20-202ENST00000374339 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.54□□□□□ -0.4
PTPN20-202ENST00000374339 ZNF428Q96B54 188 aa12.54□□□□□ -0.4
PTPN20-202ENST00000374339 SCN11AQ9UI33 1791 aa12.53□□□□□ -0.4
PTPN20-202ENST00000374339 PCDH11XQ9BZA7 1347 aa12.53□□□□□ -0.4
PTPN20-202ENST00000374339 PCDH11YQ9BZA8 1340 aa12.53□□□□□ -0.4
PTPN20-202ENST00000374339 HSP90AB1P08238 724 aaKnown RBP12.53□□□□□ -0.4
PTPN20-202ENST00000374339 IFNL2Q8IZJ0 200 aa12.53□□□□□ -0.4
PTPN20-202ENST00000374339 MBIPQ9NS73 344 aa12.53□□□□□ -0.4
PTPN20-202ENST00000374339 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.52□□□□□ -0.4
PTPN20-202ENST00000374339 RRP1P56182 461 aaKnown RBP12.52□□□□□ -0.41
PTPN20-202ENST00000374339 EXOSC9Q06265 439 aaKnown RBP12.52□□□□□ -0.41
PTPN20-202ENST00000374339 TEFQ10587 303 aa12.52□□□□□ -0.41
PTPN20-202ENST00000374339 TAF7Q15545 349 aaPredicted RBP12.52□□□□□ -0.41
PTPN20-202ENST00000374339 IL17REQ8NFR9 667 aa12.52□□□□□ -0.41
PTPN20-202ENST00000374339 ZCRB1Q8TBF4 217 aaKnown RBP12.52□□□□□ -0.41
PTPN20-202ENST00000374339 CDCA7Q9BWT1 371 aaPredicted RBP12.52□□□□□ -0.41
PTPN20-202ENST00000374339 THRAP3Q9Y2W1 955 aaKnown RBP12.52□□□□□ -0.41
PTPN20-202ENST00000374339 PHKG2P15735 406 aa12.51□□□□□ -0.41
PTPN20-202ENST00000374339 ERICH6BQ5W0A0 696 aa12.51□□□□□ -0.41
PTPN20-202ENST00000374339 NGLY1Q96IV0 654 aa12.51□□□□□ -0.41
PTPN20-202ENST00000374339 TSPYL4Q9UJ04 414 aa12.51□□□□□ -0.41
PTPN20-202ENST00000374339 SIPA1L3O60292 1781 aaPredicted RBP12.51□□□□□ -0.41
PTPN20-202ENST00000374339 SHANK3Q9BYB0 1731 aa12.5□□□□□ -0.41
PTPN20-202ENST00000374339 RNMTO43148 476 aaKnown RBP12.5□□□□□ -0.41
PTPN20-202ENST00000374339 DCAF5Q96JK2 942 aa12.5□□□□□ -0.41
PTPN20-202ENST00000374339 C8orf37Q96NL8 207 aa12.5□□□□□ -0.41
PTPN20-202ENST00000374339 USP35Q9P2H5 1018 aa12.5□□□□□ -0.41
PTPN20-202ENST00000374339 LRP6O75581 1613 aa12.5□□□□□ -0.41
PTPN20-202ENST00000374339 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms