RNA–Protein interactions for RNA: ENST00000374217.6

UBXN11-204, Transcript of UBX domain protein 11, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UBXN11, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-204ENST00000374217 IP6K1Q92551 441 aa18.86■□□□□ 0.61
UBXN11-204ENST00000374217 EIF4A2Q14240 407 aaKnown RBP18.85■□□□□ 0.61
UBXN11-204ENST00000374217 RRP9O43818 475 aaKnown RBP18.84■□□□□ 0.61
UBXN11-204ENST00000374217 MRE11P49959 708 aa18.84■□□□□ 0.61
UBXN11-204ENST00000374217 CCDC146Q8IYE0 955 aa18.84■□□□□ 0.61
UBXN11-204ENST00000374217 PNNQ9H307 717 aaKnown RBP18.84■□□□□ 0.61
UBXN11-204ENST00000374217 PHRF1Q9P1Y6 1649 aaKnown RBP18.84■□□□□ 0.61
UBXN11-204ENST00000374217 BCAR3O75815 825 aa18.84■□□□□ 0.61
UBXN11-204ENST00000374217 LTV1Q96GA3 475 aaPredicted RBP18.84■□□□□ 0.61
UBXN11-204ENST00000374217 APAF1O14727 1248 aa18.82■□□□□ 0.6
UBXN11-204ENST00000374217 MCM4P33991 863 aa18.82■□□□□ 0.6
UBXN11-204ENST00000374217 CHMP5Q9NZZ3 219 aa18.82■□□□□ 0.6
UBXN11-204ENST00000374217 XRCC6P12956 609 aaKnown RBP eCLIP18.81■□□□□ 0.6
UBXN11-204ENST00000374217 TBC1D2Q9BYX2 928 aa18.81■□□□□ 0.6
UBXN11-204ENST00000374217 SLKQ9H2G2 1235 aaPredicted RBP18.81■□□□□ 0.6
UBXN11-204ENST00000374217 SEC24BO95487 1268 aa18.81■□□□□ 0.6
UBXN11-204ENST00000374217 CANXP27824 592 aaKnown RBP18.81■□□□□ 0.6
UBXN11-204ENST00000374217 PRDM11Q9NQV5 511 aa18.81■□□□□ 0.6
UBXN11-204ENST00000374217 KIAA0232Q92628 1395 aa18.81■□□□□ 0.6
UBXN11-204ENST00000374217 COL16A1Q07092 1604 aaPredicted RBP18.8■□□□□ 0.6
UBXN11-204ENST00000374217 DDX11L8A8MPP1 907 aa18.8■□□□□ 0.6
UBXN11-204ENST00000374217 FCHSD2O94868 740 aa18.8■□□□□ 0.6
UBXN11-204ENST00000374217 HMOX1P09601 288 aa18.8■□□□□ 0.6
UBXN11-204ENST00000374217 RUNDC1Q96C34 613 aa18.8■□□□□ 0.6
UBXN11-204ENST00000374217 CRYBG1Q9Y4K1 1723 aa18.8■□□□□ 0.6
UBXN11-204ENST00000374217 PTMSP20962 102 aa18.79■□□□□ 0.6
UBXN11-204ENST00000374217 RWDD1Q9H446 243 aaPredicted RBP18.79■□□□□ 0.6
UBXN11-204ENST00000374217 SPINK5Q9NQ38 1064 aaPredicted RBP18.79■□□□□ 0.6
UBXN11-204ENST00000374217 CPDO75976 1380 aa18.79■□□□□ 0.6
UBXN11-204ENST00000374217 CHRNA2Q15822 529 aa18.79■□□□□ 0.6
UBXN11-204ENST00000374217 SULT6B1Q6IMI4 303 aa18.77■□□□□ 0.6
UBXN11-204ENST00000374217 HSP90AA1P07900 732 aaKnown RBP18.77■□□□□ 0.59
UBXN11-204ENST00000374217 ANKRD24Q8TF21 1146 aa18.77■□□□□ 0.59
UBXN11-204ENST00000374217 AXIN2Q9Y2T1 843 aa18.77■□□□□ 0.59
UBXN11-204ENST00000374217 PRKAR2BP31323 418 aa18.76■□□□□ 0.59
UBXN11-204ENST00000374217 ABCA3Q99758 1704 aa18.75■□□□□ 0.59
UBXN11-204ENST00000374217 COL22A1Q8NFW1 1626 aaPredicted RBP18.75■□□□□ 0.59
UBXN11-204ENST00000374217 WDR63Q8IWG1 891 aa18.75■□□□□ 0.59
UBXN11-204ENST00000374217 WWC1Q8IX03 1113 aa18.75■□□□□ 0.59
UBXN11-204ENST00000374217 EYA1Q99502 592 aa18.75■□□□□ 0.59
UBXN11-204ENST00000374217 COG6Q9Y2V7 657 aa18.75■□□□□ 0.59
UBXN11-204ENST00000374217 CSB-PGBD3P0DP91 1061 aa18.74■□□□□ 0.59
UBXN11-204ENST00000374217 CCDC27Q2M243 656 aa18.74■□□□□ 0.59
UBXN11-204ENST00000374217 TCP11L2Q8N4U5 519 aa18.74■□□□□ 0.59
UBXN11-204ENST00000374217 NAP1L5Q96NT1 182 aaPredicted RBP18.74■□□□□ 0.59
UBXN11-204ENST00000374217 NUTM2BA6NNL0 878 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-204ENST00000374217 NUTM2EB1AL46 878 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-204ENST00000374217 TRAK2O60296 914 aa18.73■□□□□ 0.59
UBXN11-204ENST00000374217 CT47B1P0C2W7 299 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-204ENST00000374217 RARSP54136 660 aaKnown RBP18.73■□□□□ 0.59
UBXN11-204ENST00000374217 AEBP1Q8IUX7 1158 aa18.73■□□□□ 0.59
UBXN11-204ENST00000374217 NUTM2AQ8IVF1 878 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-204ENST00000374217 PHF23Q9BUL5 403 aaPredicted RBP18.73■□□□□ 0.59
UBXN11-204ENST00000374217 IGSF1Q8N6C5 1336 aa18.73■□□□□ 0.59
UBXN11-204ENST00000374217 JCADQ9P266 1359 aa18.73■□□□□ 0.59
UBXN11-204ENST00000374217 ABCC6O95255 1503 aa18.73■□□□□ 0.59
UBXN11-204ENST00000374217 HSP90AA2PQ14568 343 aaPredicted RBP18.72■□□□□ 0.59
UBXN11-204ENST00000374217 NEUROD2Q15784 382 aa18.72■□□□□ 0.59
UBXN11-204ENST00000374217 PANK1Q8TE04 598 aa18.72■□□□□ 0.59
UBXN11-204ENST00000374217 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
UBXN11-204ENST00000374217 CIZ1Q9ULV3 898 aaPredicted RBP18.72■□□□□ 0.59
UBXN11-204ENST00000374217 PDZRN3Q9UPQ7 1066 aa18.72■□□□□ 0.59
UBXN11-204ENST00000374217 ERBB3P21860 1342 aa18.72■□□□□ 0.59
UBXN11-204ENST00000374217 HSPA1LP34931 641 aa18.71■□□□□ 0.59
UBXN11-204ENST00000374217 PKNOX2Q96KN3 472 aa18.71■□□□□ 0.59
UBXN11-204ENST00000374217 MYH16Q9H6N6 1097 aa18.71■□□□□ 0.59
UBXN11-204ENST00000374217 RRP7AQ9Y3A4 280 aaKnown RBP18.71■□□□□ 0.59
UBXN11-204ENST00000374217 RGPD5Q99666 1765 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 RGPD1P0DJD0 1748 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 FAM83GA6ND36 823 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 ADAMTS2O95450 1211 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 EVA1CP58658 441 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 NBPF6Q5VWK0 638 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 USHBP1Q8N6Y0 703 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 NBPF4Q96M43 638 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 NLRP2Q9NX02 1062 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 SKOR2Q2VWA4 1001 aaPredicted RBP18.7■□□□□ 0.58
UBXN11-204ENST00000374217 C22orf23Q9BZE7 217 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 GRPEL1Q9HAV7 217 aa18.7■□□□□ 0.58
UBXN11-204ENST00000374217 COL18A1P39060 1754 aa18.69■□□□□ 0.58
UBXN11-204ENST00000374217 TPM2P07951 284 aa18.69■□□□□ 0.58
UBXN11-204ENST00000374217 PHACTR3Q96KR7 559 aa18.68■□□□□ 0.58
UBXN11-204ENST00000374217 KDRP35968 1356 aa18.68■□□□□ 0.58
UBXN11-204ENST00000374217 ESPNB1AK53 854 aa18.67■□□□□ 0.58
UBXN11-204ENST00000374217 HSCBQ8IWL3 235 aa18.67■□□□□ 0.58
UBXN11-204ENST00000374217 SNX21Q969T3 373 aa18.67■□□□□ 0.58
UBXN11-204ENST00000374217 PCDHB15Q9Y5E8 787 aa18.67■□□□□ 0.58
UBXN11-204ENST00000374217 TMPOP42166 694 aaKnown RBP18.67■□□□□ 0.58
UBXN11-204ENST00000374217 STRN4Q9NRL3 753 aa18.67■□□□□ 0.58
UBXN11-204ENST00000374217 BTG4Q9NY30 223 aa18.67■□□□□ 0.58
UBXN11-204ENST00000374217 RIPK4P57078 832 aa18.66■□□□□ 0.58
UBXN11-204ENST00000374217 TOM1L2Q6ZVM7 507 aa18.66■□□□□ 0.58
UBXN11-204ENST00000374217 CAMTA1Q9Y6Y1 1673 aa18.66■□□□□ 0.58
UBXN11-204ENST00000374217 HDAC1Q13547 482 aaPredicted RBP18.65■□□□□ 0.58
UBXN11-204ENST00000374217 NFE2L2Q16236 605 aa18.65■□□□□ 0.58
UBXN11-204ENST00000374217 WDR17Q8IZU2 1322 aa18.65■□□□□ 0.58
UBXN11-204ENST00000374217 COL14A1Q05707 1796 aaKnown RBP18.65■□□□□ 0.58
UBXN11-204ENST00000374217 DDIT3P35638 169 aa18.65■□□□□ 0.58
UBXN11-204ENST00000374217 MVPQ14764 893 aaKnown RBP18.65■□□□□ 0.58
UBXN11-204ENST00000374217 SPATA31A6Q5VVP1 1343 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms