RNA–Protein interactions for RNA: ENST00000373482.6

PBX3-202, Transcript of PBX homeobox 3, humanhuman

TSL 1 (best)

Gene PBX3, Length 1,130 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX3-202ENST00000373482 NUDCQ9Y266 331 aa24.58■■□□□ 1.53
PBX3-202ENST00000373482 U2SURPO15042 1029 aaKnown RBP24.56■■□□□ 1.52
PBX3-202ENST00000373482 SULT6B1Q6IMI4 303 aa24.55■■□□□ 1.52
PBX3-202ENST00000373482 PLEKHG2Q9H7P9 1386 aa24.54■■□□□ 1.52
PBX3-202ENST00000373482 ZCRB1Q8TBF4 217 aaKnown RBP24.54■■□□□ 1.52
PBX3-202ENST00000373482 KDRP35968 1356 aa24.54■■□□□ 1.52
PBX3-202ENST00000373482 FAM182BQ5T319 152 aa24.52■■□□□ 1.52
PBX3-202ENST00000373482 FAM196AQ6ZSG2 479 aa24.52■■□□□ 1.52
PBX3-202ENST00000373482 HMOX1P09601 288 aa24.51■■□□□ 1.51
PBX3-202ENST00000373482 AEBP1Q8IUX7 1158 aa24.51■■□□□ 1.51
PBX3-202ENST00000373482 MARCH10Q8NA82 808 aaPredicted RBP24.51■■□□□ 1.51
PBX3-202ENST00000373482 SPG7Q9UQ90 795 aa24.51■■□□□ 1.51
PBX3-202ENST00000373482 DOT1LQ8TEK3 1739 aa24.51■■□□□ 1.51
PBX3-202ENST00000373482 EP400Q96L91 3159 aa24.51■■□□□ 1.51
PBX3-202ENST00000373482 DDX54Q8TDD1 881 aaKnown RBP24.5■■□□□ 1.51
PBX3-202ENST00000373482 PCDH11XQ9BZA7 1347 aa24.5■■□□□ 1.51
PBX3-202ENST00000373482 PCDH11YQ9BZA8 1340 aa24.5■■□□□ 1.51
PBX3-202ENST00000373482 TNS1Q9HBL0 1735 aaKnown RBP24.49■■□□□ 1.51
PBX3-202ENST00000373482 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.49■■□□□ 1.51
PBX3-202ENST00000373482 ITGB4P16144 1822 aa24.49■■□□□ 1.51
PBX3-202ENST00000373482 U2AF1L5P0DN76 240 aaPredicted RBP24.48■■□□□ 1.51
PBX3-202ENST00000373482 U2AF1Q01081 240 aaKnown RBP eCLIP24.48■■□□□ 1.51
PBX3-202ENST00000373482 NHSQ6T4R5 1651 aa24.47■■□□□ 1.51
PBX3-202ENST00000373482 SOCS7O14512 581 aa24.47■■□□□ 1.51
PBX3-202ENST00000373482 AMOTQ4VCS5 1084 aa24.47■■□□□ 1.51
PBX3-202ENST00000373482 PLEKHO1Q53GL0 409 aaPredicted RBP24.47■■□□□ 1.51
PBX3-202ENST00000373482 BCL9O00512 1426 aa24.46■■□□□ 1.51
PBX3-202ENST00000373482 DLG5Q8TDM6 1919 aa24.45■■□□□ 1.5
PBX3-202ENST00000373482 SCN11AQ9UI33 1791 aa24.44■■□□□ 1.5
PBX3-202ENST00000373482 CCDC125Q86Z20 511 aa24.44■■□□□ 1.5
PBX3-202ENST00000373482 BTAF1O14981 1849 aa24.43■■□□□ 1.5
PBX3-202ENST00000373482 UPF1Q92900 1129 aaKnown RBP eCLIP24.43■■□□□ 1.5
PBX3-202ENST00000373482 FCHSD2O94868 740 aa24.42■■□□□ 1.5
PBX3-202ENST00000373482 SF3B2Q13435 895 aaKnown RBP24.42■■□□□ 1.5
PBX3-202ENST00000373482 IFNL2Q8IZJ0 200 aa24.42■■□□□ 1.5
PBX3-202ENST00000373482 TOGARAM1Q9Y4F4 1720 aa24.41■■□□□ 1.5
PBX3-202ENST00000373482 CYP27B1O15528 508 aa24.4■■□□□ 1.5
PBX3-202ENST00000373482 WDR43Q15061 677 aaKnown RBP eCLIP24.4■■□□□ 1.5
PBX3-202ENST00000373482 ZNF530Q6P9A1 599 aaPredicted RBP24.4■■□□□ 1.5
PBX3-202ENST00000373482 RSPH6AQ9H0K4 717 aa24.4■■□□□ 1.5
PBX3-202ENST00000373482 PNNQ9H307 717 aaKnown RBP24.4■■□□□ 1.5
PBX3-202ENST00000373482 TRIM37O94972 964 aa24.39■■□□□ 1.49
PBX3-202ENST00000373482 NEFMP07197 916 aa24.39■■□□□ 1.49
PBX3-202ENST00000373482 PRKAR2BP31323 418 aa24.39■■□□□ 1.49
PBX3-202ENST00000373482 C1orf141Q5JVX7 400 aa24.39■■□□□ 1.49
PBX3-202ENST00000373482 PHKG2P15735 406 aa24.38■■□□□ 1.49
PBX3-202ENST00000373482 RGPD3A6NKT7 1758 aaPredicted RBP24.37■■□□□ 1.49
PBX3-202ENST00000373482 RGPD4Q7Z3J3 1758 aa24.37■■□□□ 1.49
PBX3-202ENST00000373482 DIEXFQ68CQ4 756 aaKnown RBP24.37■■□□□ 1.49
PBX3-202ENST00000373482 HSP90AB1P08238 724 aaKnown RBP24.36■■□□□ 1.49
PBX3-202ENST00000373482 ACSBG1Q96GR2 724 aa24.36■■□□□ 1.49
PBX3-202ENST00000373482 NKX1-1Q15270 411 aaPredicted RBP24.35■■□□□ 1.49
PBX3-202ENST00000373482 GAS2L2Q8NHY3 880 aa24.34■■□□□ 1.49
PBX3-202ENST00000373482 BCL11BQ9C0K0 894 aaPredicted RBP24.34■■□□□ 1.49
PBX3-202ENST00000373482 MRS2Q9HD23 443 aa24.34■■□□□ 1.49
PBX3-202ENST00000373482 MTHFSDQ2M296 383 aaKnown RBP24.33■■□□□ 1.49
PBX3-202ENST00000373482 AKAP4Q5JQC9 854 aa24.33■■□□□ 1.49
PBX3-202ENST00000373482 BAG6P46379 1132 aa24.32■■□□□ 1.48
PBX3-202ENST00000373482 SYTL4Q96C24 671 aaPredicted RBP24.32■■□□□ 1.48
PBX3-202ENST00000373482 MAPK8IP3Q9UPT6 1336 aa24.32■■□□□ 1.48
PBX3-202ENST00000373482 ADAMTS7Q9UKP4 1686 aa24.31■■□□□ 1.48
PBX3-202ENST00000373482 DCAF5Q96JK2 942 aa24.31■■□□□ 1.48
PBX3-202ENST00000373482 KCNQ2O43526 872 aa24.3■■□□□ 1.48
PBX3-202ENST00000373482 APBA3O96018 575 aa24.3■■□□□ 1.48
PBX3-202ENST00000373482 CCDC184Q52MB2 194 aa24.3■■□□□ 1.48
PBX3-202ENST00000373482 PHACTR3Q96KR7 559 aa24.3■■□□□ 1.48
PBX3-202ENST00000373482 PRIM1P49642 420 aaKnown RBP24.29■■□□□ 1.48
PBX3-202ENST00000373482 LY75O60449 1722 aa24.29■■□□□ 1.48
PBX3-202ENST00000373482 PLEKHF1Q96S99 279 aa24.28■■□□□ 1.48
PBX3-202ENST00000373482 ADAMTS8Q9UP79 889 aa24.28■■□□□ 1.48
PBX3-202ENST00000373482 MAP3K5Q99683 1374 aa24.28■■□□□ 1.48
PBX3-202ENST00000373482 RREB1Q92766 1687 aa24.27■■□□□ 1.48
PBX3-202ENST00000373482 SIPA1L3O60292 1781 aaPredicted RBP24.27■■□□□ 1.48
PBX3-202ENST00000373482 KDM6AO15550 1401 aaPredicted RBP24.27■■□□□ 1.48
PBX3-202ENST00000373482 GNAT3A8MTJ3 354 aa24.26■■□□□ 1.47
PBX3-202ENST00000373482 MPRIPQ6WCQ1 1025 aa24.26■■□□□ 1.47
PBX3-202ENST00000373482 PTF1AQ7RTS3 328 aa24.26■■□□□ 1.47
PBX3-202ENST00000373482 ERVV-2B6SEH9 535 aa24.25■■□□□ 1.47
PBX3-202ENST00000373482 DEFB132Q7Z7B7 95 aa24.24■■□□□ 1.47
PBX3-202ENST00000373482 TMOD3Q9NYL9 352 aa24.24■■□□□ 1.47
PBX3-202ENST00000373482 PLSCR1O15162 318 aa24.23■■□□□ 1.47
PBX3-202ENST00000373482 RUNDC1Q96C34 613 aa24.23■■□□□ 1.47
PBX3-202ENST00000373482 NUP188Q5SRE5 1749 aa24.23■■□□□ 1.47
PBX3-202ENST00000373482 EN1Q05925 392 aaPredicted RBP24.22■■□□□ 1.47
PBX3-202ENST00000373482 CCDC146Q8IYE0 955 aa24.22■■□□□ 1.47
PBX3-202ENST00000373482 PNISRQ8TF01 805 aaKnown RBP24.22■■□□□ 1.47
PBX3-202ENST00000373482 RTF1Q92541 710 aaKnown RBP24.22■■□□□ 1.47
PBX3-202ENST00000373482 RNMTO43148 476 aaKnown RBP24.21■■□□□ 1.47
PBX3-202ENST00000373482 CABP4P57796 275 aa24.21■■□□□ 1.47
PBX3-202ENST00000373482 NFE2L2Q16236 605 aa24.21■■□□□ 1.47
PBX3-202ENST00000373482 MRC1P22897 1456 aa24.2■■□□□ 1.47
PBX3-202ENST00000373482 TAF1LQ8IZX4 1826 aa24.2■■□□□ 1.46
PBX3-202ENST00000373482 CCER2I3L3R5 266 aa24.2■■□□□ 1.46
PBX3-202ENST00000373482 PIGBQ92521 554 aa24.19■■□□□ 1.46
PBX3-202ENST00000373482 LGR6Q9HBX8 967 aa24.19■■□□□ 1.46
PBX3-202ENST00000373482 PAPPAQ13219 1627 aa24.18■■□□□ 1.46
PBX3-202ENST00000373482 HTATSF1O43719 755 aaKnown RBP24.18■■□□□ 1.46
PBX3-202ENST00000373482 EZH2Q15910 746 aaKnown RBP24.18■■□□□ 1.46
PBX3-202ENST00000373482 CAMKK2Q96RR4 588 aa24.18■■□□□ 1.46
PBX3-202ENST00000373482 SLC52A2Q9HAB3 445 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms