RNA–Protein interactions for RNA: ENST00000373198.8

PTPRT-206, Transcript of protein tyrosine phosphatase, receptor type T, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRT, Length 12,746 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRT-206ENST00000373198 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.6□□□□□ -0.71
PTPRT-206ENST00000373198 LRP2BPQ9P2M1 347 aa10.6□□□□□ -0.71
PTPRT-206ENST00000373198 ZNF219Q9P2Y4 722 aaPredicted RBP10.6□□□□□ -0.71
PTPRT-206ENST00000373198 SPTY2D1Q68D10 685 aaPredicted RBP10.59□□□□□ -0.71
PTPRT-206ENST00000373198 ZNF397Q8NF99 534 aaPredicted RBP10.59□□□□□ -0.71
PTPRT-206ENST00000373198 FEZ1Q99689 392 aa10.59□□□□□ -0.71
PTPRT-206ENST00000373198 PUF60Q9UHX1 559 aaKnown RBP10.59□□□□□ -0.71
PTPRT-206ENST00000373198 RGS22Q8NE09 1264 aa10.59□□□□□ -0.71
PTPRT-206ENST00000373198 LARP1Q6PKG0 1096 aaKnown RBP10.59□□□□□ -0.71
PTPRT-206ENST00000373198 CCDC30Q5VVM6 783 aa10.59□□□□□ -0.71
PTPRT-206ENST00000373198 TRAK2O60296 914 aa10.59□□□□□ -0.71
PTPRT-206ENST00000373198 CABP2Q9NPB3 220 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 CBFA2T2O43439 604 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 LMAN1P49257 510 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 VTI1AQ96AJ9 217 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 CCDC192P0DO97 292 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 GIGYF2Q6Y7W6 1299 aaKnown RBP10.58□□□□□ -0.72
PTPRT-206ENST00000373198 OTUD6BQ8N6M0 293 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 CCDC148Q8NFR7 591 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 CCDC96Q2M329 555 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 KLHL10Q6JEL2 608 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 GPRASP1Q5JY77 1395 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 RUNDC1Q96C34 613 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 POLR3DP05423 398 aaPredicted RBP10.58□□□□□ -0.72
PTPRT-206ENST00000373198 MAP3K9P80192 1104 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 LUZP1Q86V48 1076 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 CFAP57Q96MR6 1250 aa10.58□□□□□ -0.72
PTPRT-206ENST00000373198 ANKRD18BA2A2Z9 1011 aa10.57□□□□□ -0.72
PTPRT-206ENST00000373198 SH3BP5O60239 455 aa10.57□□□□□ -0.72
PTPRT-206ENST00000373198 ECM2O94769 699 aaPredicted RBP10.57□□□□□ -0.72
PTPRT-206ENST00000373198 ANKIB1Q9P2G1 1089 aa10.57□□□□□ -0.72
PTPRT-206ENST00000373198 RAD54L2Q9Y4B4 1467 aa10.57□□□□□ -0.72
PTPRT-206ENST00000373198 FANCIQ9NVI1 1328 aa10.57□□□□□ -0.72
PTPRT-206ENST00000373198 RNF187Q5TA31 235 aaPredicted RBP10.57□□□□□ -0.72
PTPRT-206ENST00000373198 PLEKHO1Q53GL0 409 aaPredicted RBP10.57□□□□□ -0.72
PTPRT-206ENST00000373198 TMCO3Q6UWJ1 677 aa10.57□□□□□ -0.72
PTPRT-206ENST00000373198 TMX1Q9H3N1 280 aa10.57□□□□□ -0.72
PTPRT-206ENST00000373198 MIA2Q96PC5 1412 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 SPA17Q15506 151 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 TIGD1Q96MW7 591 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 ARHGAP29Q52LW3 1261 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 RAB3IL1Q8TBN0 382 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 SRRTQ9BXP5 876 aaKnown RBP10.56□□□□□ -0.72
PTPRT-206ENST00000373198 CCDC18Q5T9S5 1454 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 TSNARE1Q96NA8 513 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 TATP17735 454 aaPredicted RBP10.56□□□□□ -0.72
PTPRT-206ENST00000373198 LRSAM1Q6UWE0 723 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 CYP46A1Q9Y6A2 500 aa10.56□□□□□ -0.72
PTPRT-206ENST00000373198 MBD3O95983 291 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 CDKL5O76039 1030 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 PPP1R14CQ8TAE6 165 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 ABCF2Q9UG63 623 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 FMN1Q68DA7 1419 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 CACNA2D4Q7Z3S7 1137 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 AACSQ86V21 672 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 CRACR2AQ9BSW2 395 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 GGNBP2Q9H3C7 697 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 CUL5Q93034 780 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 TSG101Q99816 390 aa10.55□□□□□ -0.72
PTPRT-206ENST00000373198 GNAI2P04899 355 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 KANK4Q5T7N3 995 aaPredicted RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 DDX11Q96FC9 970 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 USP47Q96K76 1375 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 IGHMBP2P38935 993 aaKnown RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 IDH1O75874 414 aaKnown RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 BMS1Q14692 1282 aaKnown RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 CFAP100Q494V2 611 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 LARP1BQ659C4 914 aaKnown RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 SYNCQ9H7C4 482 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 MYO10Q9HD67 2058 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 GCOM1H8Y6P7 765 aaPredicted RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 MYZAPP0CAP1 466 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 PRPF4BQ13523 1007 aaKnown RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 MINDY4BA8MYZ0 360 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 POLR3GO15318 223 aaPredicted RBP10.54□□□□□ -0.72
PTPRT-206ENST00000373198 ZSCAN25Q6NSZ9 544 aa10.54□□□□□ -0.72
PTPRT-206ENST00000373198 MTHFSP49914 203 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 FSD2A1L4K1 749 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 VPS36Q86VN1 386 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 SAMM50Q9Y512 469 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 IMMTQ16891 758 aaKnown RBP10.53□□□□□ -0.72
PTPRT-206ENST00000373198 MKNK2Q9HBH9 465 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 CGNQ9P2M7 1197 aaKnown RBP10.53□□□□□ -0.72
PTPRT-206ENST00000373198 ZPR1O75312 459 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 ANKRD1Q15327 319 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 SPATA32Q96LK8 384 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 CCDC175P0C221 793 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 HDGFL1Q5TGJ6 251 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 SHTN1A0MZ66 631 aa10.53□□□□□ -0.72
PTPRT-206ENST00000373198 GAS2L2Q8NHY3 880 aa10.52□□□□□ -0.72
PTPRT-206ENST00000373198 SLC4A8Q2Y0W8 1093 aa10.52□□□□□ -0.72
PTPRT-206ENST00000373198 FILIP1Q7Z7B0 1213 aa10.52□□□□□ -0.72
PTPRT-206ENST00000373198 UPF3BQ9BZI7 483 aaKnown RBP10.52□□□□□ -0.72
PTPRT-206ENST00000373198 ZHX1Q9UKY1 873 aaPredicted RBP10.52□□□□□ -0.72
PTPRT-206ENST00000373198 DZIP1Q86YF9 867 aaKnown RBP10.52□□□□□ -0.73
PTPRT-206ENST00000373198 GNAI3P08754 354 aa10.52□□□□□ -0.73
PTPRT-206ENST00000373198 BICD1Q96G01 975 aa10.52□□□□□ -0.73
PTPRT-206ENST00000373198 CASQ1P31415 396 aa10.52□□□□□ -0.73
PTPRT-206ENST00000373198 KRT85P78386 507 aa10.52□□□□□ -0.73
PTPRT-206ENST00000373198 CAMK4Q16566 473 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms