RNA–Protein interactions for RNA: ENST00000372243.7

TMEM53-204, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,579 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-204ENST00000372243 PKD1L3Q7Z443 1732 aa20.89■□□□□ 0.94
TMEM53-204ENST00000372243 NFE2L2Q16236 605 aa20.89■□□□□ 0.94
TMEM53-204ENST00000372243 PLEKHO1Q53GL0 409 aaPredicted RBP20.89■□□□□ 0.94
TMEM53-204ENST00000372243 GAS2L2Q8NHY3 880 aa20.89■□□□□ 0.94
TMEM53-204ENST00000372243 CDCA7Q9BWT1 371 aaPredicted RBP20.89■□□□□ 0.94
TMEM53-204ENST00000372243 USP35Q9P2H5 1018 aa20.89■□□□□ 0.94
TMEM53-204ENST00000372243 BARGINQ6ZT62 677 aa20.89■□□□□ 0.93
TMEM53-204ENST00000372243 TRPC5Q9UL62 973 aaPredicted RBP20.89■□□□□ 0.93
TMEM53-204ENST00000372243 MTHFSDQ2M296 383 aaKnown RBP20.88■□□□□ 0.93
TMEM53-204ENST00000372243 YTHDC1Q96MU7 727 aaKnown RBP20.88■□□□□ 0.93
TMEM53-204ENST00000372243 CCDC9Q9Y3X0 531 aaKnown RBP20.88■□□□□ 0.93
TMEM53-204ENST00000372243 CCDC27Q2M243 656 aa20.87■□□□□ 0.93
TMEM53-204ENST00000372243 ZNF772Q68DY9 489 aaPredicted RBP20.86■□□□□ 0.93
TMEM53-204ENST00000372243 ILDR1Q86SU0 546 aaPredicted RBP20.86■□□□□ 0.93
TMEM53-204ENST00000372243 SPG7Q9UQ90 795 aa20.86■□□□□ 0.93
TMEM53-204ENST00000372243 ZBED9Q6R2W3 1325 aa20.86■□□□□ 0.93
TMEM53-204ENST00000372243 DLG5Q8TDM6 1919 aa20.86■□□□□ 0.93
TMEM53-204ENST00000372243 RIPK4P57078 832 aa20.85■□□□□ 0.93
TMEM53-204ENST00000372243 GJD4Q96KN9 370 aaPredicted RBP20.85■□□□□ 0.93
TMEM53-204ENST00000372243 PHF23Q9BUL5 403 aaPredicted RBP20.85■□□□□ 0.93
TMEM53-204ENST00000372243 RRP7AQ9Y3A4 280 aaKnown RBP20.85■□□□□ 0.93
TMEM53-204ENST00000372243 GLI3P10071 1580 aa20.84■□□□□ 0.93
TMEM53-204ENST00000372243 LMOD3Q0VAK6 560 aa20.84■□□□□ 0.93
TMEM53-204ENST00000372243 HTATSF1O43719 755 aaKnown RBP20.83■□□□□ 0.92
TMEM53-204ENST00000372243 NEUROD2Q15784 382 aa20.83■□□□□ 0.92
TMEM53-204ENST00000372243 ZCRB1Q8TBF4 217 aaKnown RBP20.83■□□□□ 0.92
TMEM53-204ENST00000372243 QTRT2Q9H974 415 aaKnown RBP20.83■□□□□ 0.92
TMEM53-204ENST00000372243 AKAP4Q5JQC9 854 aa20.82■□□□□ 0.92
TMEM53-204ENST00000372243 SHANK3Q9BYB0 1731 aa20.82■□□□□ 0.92
TMEM53-204ENST00000372243 ZNF521Q96K83 1311 aa20.81■□□□□ 0.92
TMEM53-204ENST00000372243 ZNF530Q6P9A1 599 aaPredicted RBP20.81■□□□□ 0.92
TMEM53-204ENST00000372243 TRIM35Q9UPQ4 493 aa20.81■□□□□ 0.92
TMEM53-204ENST00000372243 MAP3K5Q99683 1374 aa20.81■□□□□ 0.92
TMEM53-204ENST00000372243 PCDH11XQ9BZA7 1347 aa20.81■□□□□ 0.92
TMEM53-204ENST00000372243 PCDH11YQ9BZA8 1340 aa20.81■□□□□ 0.92
TMEM53-204ENST00000372243 SENP3-EIF4A1A0A087X0R7 540 aa20.8■□□□□ 0.92
TMEM53-204ENST00000372243 GNAT3A8MTJ3 354 aa20.8■□□□□ 0.92
TMEM53-204ENST00000372243 WWC1Q8IX03 1113 aa20.8■□□□□ 0.92
TMEM53-204ENST00000372243 SALL2Q9Y467 1007 aaPredicted RBP20.8■□□□□ 0.92
TMEM53-204ENST00000372243 THSD7AQ9UPZ6 1657 aa20.8■□□□□ 0.92
TMEM53-204ENST00000372243 ONECUT3O60422 494 aaPredicted RBP20.8■□□□□ 0.92
TMEM53-204ENST00000372243 C1orf141Q5JVX7 400 aa20.8■□□□□ 0.92
TMEM53-204ENST00000372243 IFNL2Q8IZJ0 200 aa20.8■□□□□ 0.92
TMEM53-204ENST00000372243 TNS2Q63HR2 1409 aa20.8■□□□□ 0.92
TMEM53-204ENST00000372243 LRRC37A3O60309 1634 aa20.79■□□□□ 0.92
TMEM53-204ENST00000372243 EXOC5O00471 708 aa20.79■□□□□ 0.92
TMEM53-204ENST00000372243 FAM98CQ17RN3 349 aaKnown RBP20.79■□□□□ 0.92
TMEM53-204ENST00000372243 PHKG2P15735 406 aa20.78■□□□□ 0.92
TMEM53-204ENST00000372243 CYP27B1O15528 508 aa20.77■□□□□ 0.92
TMEM53-204ENST00000372243 DDB1Q16531 1140 aa20.77■□□□□ 0.92
TMEM53-204ENST00000372243 WDR63Q8IWG1 891 aa20.77■□□□□ 0.92
TMEM53-204ENST00000372243 RTF1Q92541 710 aaKnown RBP20.77■□□□□ 0.92
TMEM53-204ENST00000372243 ADAMTS7Q9UKP4 1686 aa20.77■□□□□ 0.92
TMEM53-204ENST00000372243 HSP90AB1P08238 724 aaKnown RBP20.76■□□□□ 0.91
TMEM53-204ENST00000372243 RBM6P78332 1123 aaKnown RBP20.76■□□□□ 0.91
TMEM53-204ENST00000372243 PDE3BQ13370 1112 aa20.76■□□□□ 0.91
TMEM53-204ENST00000372243 CALD1Q05682 793 aaKnown RBP20.75■□□□□ 0.91
TMEM53-204ENST00000372243 NKX1-1Q15270 411 aaPredicted RBP20.75■□□□□ 0.91
TMEM53-204ENST00000372243 RGS17Q9UGC6 210 aaPredicted RBP20.75■□□□□ 0.91
TMEM53-204ENST00000372243 CEMIPQ8WUJ3 1361 aa20.74■□□□□ 0.91
TMEM53-204ENST00000372243 IL16Q14005 1332 aa20.74■□□□□ 0.91
TMEM53-204ENST00000372243 VIRMAQ69YN4 1812 aaKnown RBP20.73■□□□□ 0.91
TMEM53-204ENST00000372243 GOLGA2Q08379 1002 aa20.73■□□□□ 0.91
TMEM53-204ENST00000372243 DCAF5Q96JK2 942 aa20.73■□□□□ 0.91
TMEM53-204ENST00000372243 SCN11AQ9UI33 1791 aa20.73■□□□□ 0.91
TMEM53-204ENST00000372243 MCM10Q7L590 875 aa20.72■□□□□ 0.91
TMEM53-204ENST00000372243 IL17REQ8NFR9 667 aa20.72■□□□□ 0.91
TMEM53-204ENST00000372243 DDX54Q8TDD1 881 aaKnown RBP20.72■□□□□ 0.91
TMEM53-204ENST00000372243 DCTN1Q14203 1278 aa20.72■□□□□ 0.91
TMEM53-204ENST00000372243 KDM6AO15550 1401 aaPredicted RBP20.71■□□□□ 0.91
TMEM53-204ENST00000372243 RNMTO43148 476 aaKnown RBP20.71■□□□□ 0.91
TMEM53-204ENST00000372243 MPRIPQ6WCQ1 1025 aa20.71■□□□□ 0.91
TMEM53-204ENST00000372243 RXRBP28702 533 aa20.69■□□□□ 0.9
TMEM53-204ENST00000372243 THUMPD2Q9BTF0 503 aaKnown RBP20.69■□□□□ 0.9
TMEM53-204ENST00000372243 LGR6Q9HBX8 967 aa20.69■□□□□ 0.9
TMEM53-204ENST00000372243 A0A0G2JS52 829 aa20.68■□□□□ 0.9
TMEM53-204ENST00000372243 E9PSI1 815 aa20.68■□□□□ 0.9
TMEM53-204ENST00000372243 MYT1Q01538 1121 aa20.68■□□□□ 0.9
TMEM53-204ENST00000372243 SEPT12Q8IYM1 358 aa20.68■□□□□ 0.9
TMEM53-204ENST00000372243 MRC1P22897 1456 aa20.68■□□□□ 0.9
TMEM53-204ENST00000372243 SLFN5Q08AF3 891 aa20.68■□□□□ 0.9
TMEM53-204ENST00000372243 IFT57Q9NWB7 429 aa20.68■□□□□ 0.9
TMEM53-204ENST00000372243 ZNF853P0CG23 659 aa20.67■□□□□ 0.9
TMEM53-204ENST00000372243 GNAI1P63096 354 aa20.67■□□□□ 0.9
TMEM53-204ENST00000372243 POTEAQ6S8J7 498 aa20.67■□□□□ 0.9
TMEM53-204ENST00000372243 TRMT2AQ8IZ69 625 aaKnown RBP20.67■□□□□ 0.9
TMEM53-204ENST00000372243 MARCH10Q8NA82 808 aaPredicted RBP20.67■□□□□ 0.9
TMEM53-204ENST00000372243 CFAP44Q96MT7 982 aa20.67■□□□□ 0.9
TMEM53-204ENST00000372243 BABAM1Q9NWV8 329 aa20.67■□□□□ 0.9
TMEM53-204ENST00000372243 SIPA1L3O60292 1781 aaPredicted RBP20.66■□□□□ 0.9
TMEM53-204ENST00000372243 ERVV-2B6SEH9 535 aa20.66■□□□□ 0.9
TMEM53-204ENST00000372243 TEFQ10587 303 aa20.66■□□□□ 0.9
TMEM53-204ENST00000372243 CDCA7LQ96GN5 454 aa20.66■□□□□ 0.9
TMEM53-204ENST00000372243 MYH16Q9H6N6 1097 aa20.65■□□□□ 0.9
TMEM53-204ENST00000372243 SPINK5Q9NQ38 1064 aaPredicted RBP20.65■□□□□ 0.9
TMEM53-204ENST00000372243 TOGARAM1Q9Y4F4 1720 aa20.65■□□□□ 0.9
TMEM53-204ENST00000372243 BCL9O00512 1426 aa20.64■□□□□ 0.9
TMEM53-204ENST00000372243 TAF7Q15545 349 aaPredicted RBP20.64■□□□□ 0.9
TMEM53-204ENST00000372243 SLC52A2Q9HAB3 445 aa20.64■□□□□ 0.9
TMEM53-204ENST00000372243 CHL1O00533 1208 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 106.5 ms