RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 CCDC191Q8NCU4 936 aa28.24■■■□□ 2.11
RAPGEF1-203ENST00000372195 PPP1R1BQ9UD71 204 aaPredicted RBP28.23■■■□□ 2.11
RAPGEF1-203ENST00000372195 PRDM10Q9NQV6 1147 aa28.23■■■□□ 2.11
RAPGEF1-203ENST00000372195 SEPT11Q9NVA2 429 aaKnown RBP28.23■■■□□ 2.11
RAPGEF1-203ENST00000372195 SSBP05455 408 aaKnown RBP eCLIP28.23■■■□□ 2.11
RAPGEF1-203ENST00000372195 TMPOP42166 694 aaKnown RBP28.23■■■□□ 2.11
RAPGEF1-203ENST00000372195 NACAP1Q9BZK3 213 aa28.23■■■□□ 2.11
RAPGEF1-203ENST00000372195 HSP90AB3PQ58FF7 597 aa28.22■■■□□ 2.11
RAPGEF1-203ENST00000372195 SLC26A8Q96RN1 970 aa28.22■■■□□ 2.11
RAPGEF1-203ENST00000372195 TDO2P48775 406 aa28.22■■■□□ 2.11
RAPGEF1-203ENST00000372195 ERICH3Q5RHP9 1530 aa28.22■■■□□ 2.11
RAPGEF1-203ENST00000372195 MPHOSPH8Q99549 860 aa28.22■■■□□ 2.11
RAPGEF1-203ENST00000372195 BICDL1Q6ZP65 573 aa28.22■■■□□ 2.11
RAPGEF1-203ENST00000372195 RBM5P52756 815 aaKnown RBP eCLIP28.21■■■□□ 2.11
RAPGEF1-203ENST00000372195 DACH1Q9UI36 760 aa28.2■■■□□ 2.11
RAPGEF1-203ENST00000372195 NEFHP12036 1026 aa28.2■■■□□ 2.1
RAPGEF1-203ENST00000372195 UPF3BQ9BZI7 483 aaKnown RBP28.2■■■□□ 2.1
RAPGEF1-203ENST00000372195 SYNJ2O15056 1496 aa28.2■■■□□ 2.1
RAPGEF1-203ENST00000372195 EHBP1L1Q8N3D4 1523 aa28.2■■■□□ 2.1
RAPGEF1-203ENST00000372195 ESPNB1AK53 854 aa28.2■■■□□ 2.1
RAPGEF1-203ENST00000372195 PHF23Q9BUL5 403 aaPredicted RBP28.19■■■□□ 2.1
RAPGEF1-203ENST00000372195 PRPF40BQ6NWY9 871 aaKnown RBP28.19■■■□□ 2.1
RAPGEF1-203ENST00000372195 HFM1A2PYH4 1435 aa28.19■■■□□ 2.1
RAPGEF1-203ENST00000372195 PDCL3Q9H2J4 239 aa28.18■■■□□ 2.1
RAPGEF1-203ENST00000372195 RAI14Q9P0K7 980 aa28.18■■■□□ 2.1
RAPGEF1-203ENST00000372195 SPG7Q9UQ90 795 aa28.18■■■□□ 2.1
RAPGEF1-203ENST00000372195 IDH1O75874 414 aaKnown RBP28.18■■■□□ 2.1
RAPGEF1-203ENST00000372195 PIP4K2AP48426 406 aaPredicted RBP28.18■■■□□ 2.1
RAPGEF1-203ENST00000372195 STIM1Q13586 685 aa28.18■■■□□ 2.1
RAPGEF1-203ENST00000372195 TMX1Q9H3N1 280 aa28.17■■■□□ 2.1
RAPGEF1-203ENST00000372195 ANKRD62A6NC57 917 aa28.17■■■□□ 2.1
RAPGEF1-203ENST00000372195 USHBP1Q8N6Y0 703 aa28.17■■■□□ 2.1
RAPGEF1-203ENST00000372195 GUCY1B3Q02153 619 aa28.17■■■□□ 2.1
RAPGEF1-203ENST00000372195 SOGA3Q5TF21 947 aa28.17■■■□□ 2.1
RAPGEF1-203ENST00000372195 ZNF692Q9BU19 519 aaPredicted RBP28.17■■■□□ 2.1
RAPGEF1-203ENST00000372195 NFE2L2Q16236 605 aa28.16■■■□□ 2.1
RAPGEF1-203ENST00000372195 CBFA2T2O43439 604 aa28.16■■■□□ 2.1
RAPGEF1-203ENST00000372195 DAPK1P53355 1430 aa28.15■■■□□ 2.1
RAPGEF1-203ENST00000372195 CFAP45Q9UL16 551 aa28.15■■■□□ 2.1
RAPGEF1-203ENST00000372195 KRI1Q8N9T8 703 aaKnown RBP28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 UBAC1Q9BSL1 405 aa28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 GOLGA6L10A6NI86 522 aa28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 TAX1BP1Q86VP1 789 aa28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 ZSCAN31Q96LW9 406 aaPredicted RBP28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 LRRFIP2Q9Y608 721 aaKnown RBP28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 DUSP27Q5VZP5 1158 aa28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 NOL7Q9UMY1 257 aaKnown RBP28.14■■■□□ 2.1
RAPGEF1-203ENST00000372195 CEP57L1Q8IYX8 460 aa28.14■■■□□ 2.09
RAPGEF1-203ENST00000372195 BOLA2Q9H3K6 86 aa28.14■■■□□ 2.09
RAPGEF1-203ENST00000372195 F6X3S4 739 aa28.13■■■□□ 2.09
RAPGEF1-203ENST00000372195 USP5P45974 858 aa28.13■■■□□ 2.09
RAPGEF1-203ENST00000372195 ZC3H6P61129 1189 aaKnown RBP28.13■■■□□ 2.09
RAPGEF1-203ENST00000372195 SSFA2P28290 1259 aa28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 ANKRD30BQ9BXX2 1392 aa28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 MAP3K11Q16584 847 aa28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 ZSCAN25Q6NSZ9 544 aa28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 LRP2BPQ9P2M1 347 aa28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 GNAT3A8MTJ3 354 aa28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 ENOX2Q16206 610 aaKnown RBP28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 PPP6R1Q9UPN7 881 aa28.12■■■□□ 2.09
RAPGEF1-203ENST00000372195 FCHSD2O94868 740 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 ERLIN2O94905 339 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 WAPLQ7Z5K2 1190 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 RAPGEF3O95398 923 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 MX1P20591 662 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 CBX1P83916 185 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 SSH1Q8WYL5 1049 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 CCDC102AQ96A19 550 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 CFAP100Q494V2 611 aa28.11■■■□□ 2.09
RAPGEF1-203ENST00000372195 CEP126Q9P2H0 1117 aa28.1■■■□□ 2.09
RAPGEF1-203ENST00000372195 RPAP2Q8IXW5 612 aaPredicted RBP28.09■■■□□ 2.09
RAPGEF1-203ENST00000372195 TIAM1Q13009 1591 aa28.09■■■□□ 2.09
RAPGEF1-203ENST00000372195 ZSCAN29Q8IWY8 852 aaPredicted RBP28.09■■■□□ 2.09
RAPGEF1-203ENST00000372195 CDKL5O76039 1030 aa28.08■■■□□ 2.09
RAPGEF1-203ENST00000372195 RARSP54136 660 aaKnown RBP28.08■■■□□ 2.09
RAPGEF1-203ENST00000372195 KIAA1328Q86T90 577 aa28.08■■■□□ 2.09
RAPGEF1-203ENST00000372195 PAF1Q8N7H5 531 aa28.08■■■□□ 2.09
RAPGEF1-203ENST00000372195 GRIN2BQ13224 1484 aa28.08■■■□□ 2.09
RAPGEF1-203ENST00000372195 ABCF2Q9UG63 623 aa28.08■■■□□ 2.09
RAPGEF1-203ENST00000372195 DHX8Q14562 1220 aaKnown RBP28.08■■■□□ 2.09
RAPGEF1-203ENST00000372195 IMMTQ16891 758 aaKnown RBP28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 MYD88Q99836 296 aa28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 CIZ1Q9ULV3 898 aaPredicted RBP28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 KIAA0754O94854 1291 aa28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 SEPT7Q16181 437 aaKnown RBP28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 TAF3Q5VWG9 929 aa28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 CCDC82Q8N4S0 544 aa28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 AIDAQ96BJ3 306 aa28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 CCDC8Q9H0W5 538 aaPredicted RBP28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 SUPT6HQ7KZ85 1726 aaKnown RBP28.07■■■□□ 2.08
RAPGEF1-203ENST00000372195 KLHL10Q6JEL2 608 aa28.06■■■□□ 2.08
RAPGEF1-203ENST00000372195 GDPD2Q9HCC8 539 aa28.06■■■□□ 2.08
RAPGEF1-203ENST00000372195 EIF5P55010 431 aaKnown RBP28.06■■■□□ 2.08
RAPGEF1-203ENST00000372195 WWC2Q6AWC2 1192 aa28.06■■■□□ 2.08
RAPGEF1-203ENST00000372195 PDCL2Q8N4E4 241 aa28.06■■■□□ 2.08
RAPGEF1-203ENST00000372195 CDK13Q14004 1512 aaKnown RBP28.06■■■□□ 2.08
RAPGEF1-203ENST00000372195 NUDT16Q96DE0 195 aaKnown RBP28.05■■■□□ 2.08
RAPGEF1-203ENST00000372195 CTNNA3Q9UI47 895 aa28.05■■■□□ 2.08
RAPGEF1-203ENST00000372195 ERLIN1O75477 346 aa28.05■■■□□ 2.08
RAPGEF1-203ENST00000372195 EPB41L2O43491 1005 aaKnown RBP28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms