RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 FAM208AQ9UK61 1670 aaKnown RBP5.84□□□□□ -1.47
CDR1-201ENST00000370532 TMEM132AQ24JP5 1023 aa5.84□□□□□ -1.48
CDR1-201ENST00000370532 POGKQ9P215 609 aa5.84□□□□□ -1.48
CDR1-201ENST00000370532 THRAP3Q9Y2W1 955 aaKnown RBP5.84□□□□□ -1.48
CDR1-201ENST00000370532 MON2Q7Z3U7 1717 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 CCER2I3L3R5 266 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 MAP3K13O43283 966 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 CFAP70Q5T0N1 1121 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 BARGINQ6ZT62 677 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 PRAM1Q96QH2 718 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 VGLL3A8MV65 326 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 HNRNPUQ00839 825 aaKnown RBP eCLIP5.83□□□□□ -1.48
CDR1-201ENST00000370532 WAPLQ7Z5K2 1190 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 PDCL3Q9H2J4 239 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 ZRANB1Q9UGI0 708 aa5.83□□□□□ -1.48
CDR1-201ENST00000370532 FOXO3O43524 673 aa5.82□□□□□ -1.48
CDR1-201ENST00000370532 FXR2P51116 673 aaKnown RBP eCLIP5.82□□□□□ -1.48
CDR1-201ENST00000370532 SPATA31A5Q5VU36 1347 aa5.82□□□□□ -1.48
CDR1-201ENST00000370532 SPATA31A7Q8IWB4 1347 aa5.82□□□□□ -1.48
CDR1-201ENST00000370532 NINLQ9Y2I6 1382 aa5.82□□□□□ -1.48
CDR1-201ENST00000370532 COL18A1P39060 1754 aa5.82□□□□□ -1.48
CDR1-201ENST00000370532 SSH2Q76I76 1423 aa5.82□□□□□ -1.48
CDR1-201ENST00000370532 CDCA7Q9BWT1 371 aaPredicted RBP5.82□□□□□ -1.48
CDR1-201ENST00000370532 MFRPQ9BY79 579 aa5.82□□□□□ -1.48
CDR1-201ENST00000370532 PEAK1Q9H792 1746 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 HMGB2P26583 209 aaKnown RBP5.81□□□□□ -1.48
CDR1-201ENST00000370532 CLCN1P35523 988 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 CHRDL2Q6WN34 429 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 SECISBP2LQ93073 1101 aaKnown RBP5.81□□□□□ -1.48
CDR1-201ENST00000370532 PHF12Q96QT6 1004 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 TMEM51Q9NW97 253 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 QSER1Q2KHR3 1735 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 ADAMTS2O95450 1211 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 CHRM1P11229 460 aaPredicted RBP5.81□□□□□ -1.48
CDR1-201ENST00000370532 SF3B2Q13435 895 aaKnown RBP5.81□□□□□ -1.48
CDR1-201ENST00000370532 NBPF8Q3BBV2 869 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 TMEM132EQ6IEE7 984 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 DDRGK1Q96HY6 314 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 STK26Q9P289 416 aa5.81□□□□□ -1.48
CDR1-201ENST00000370532 TTC21AQ8NDW8 1320 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 PRR36Q9H6K5 1346 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 AATKQ6ZMQ8 1374 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 BAG6P46379 1132 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 CNGB1Q14028 1251 aaPredicted RBP5.8□□□□□ -1.48
CDR1-201ENST00000370532 USP31Q70CQ4 1352 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 PLEKHG2Q9H7P9 1386 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 FRAT2O75474 233 aaPredicted RBP5.8□□□□□ -1.48
CDR1-201ENST00000370532 KRT27Q7Z3Y8 459 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 FTSJ3Q8IY81 847 aaKnown RBP5.8□□□□□ -1.48
CDR1-201ENST00000370532 NUDT16Q96DE0 195 aaKnown RBP5.8□□□□□ -1.48
CDR1-201ENST00000370532 NUP188Q5SRE5 1749 aa5.8□□□□□ -1.48
CDR1-201ENST00000370532 USP6P35125 1406 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 CAMTA1Q9Y6Y1 1673 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 SLC4A3P48751 1232 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 DDX17Q92841 729 aaKnown RBP5.79□□□□□ -1.48
CDR1-201ENST00000370532 SPATA31A1Q5TZJ5 1347 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 EVX2Q03828 476 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 FAM196AQ6ZSG2 479 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 NLRP13Q86W25 1043 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 SEPT12Q8IYM1 358 aa5.79□□□□□ -1.48
CDR1-201ENST00000370532 PIK3C2AO00443 1686 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 SBF2Q86WG5 1849 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 ANP32CO43423 234 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 LRRC37A3O60309 1634 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 COL24A1Q17RW2 1714 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 NGDNQ8NEJ9 315 aaKnown RBP5.78□□□□□ -1.48
CDR1-201ENST00000370532 PRDM10Q9NQV6 1147 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 CRB1P82279 1406 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 CPSF1Q10570 1443 aaKnown RBP5.78□□□□□ -1.48
CDR1-201ENST00000370532 PPIP5K1Q6PFW1 1433 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 CCDC7Q96M83 1385 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 EVC2Q86UK5 1308 aa5.78□□□□□ -1.48
CDR1-201ENST00000370532 EFCAB3Q8N7B9 438 aa5.77□□□□□ -1.48
CDR1-201ENST00000370532 KCNH5Q8NCM2 988 aa5.77□□□□□ -1.48
CDR1-201ENST00000370532 NFAT5O94916 1531 aa5.77□□□□□ -1.49
CDR1-201ENST00000370532 COL5A2P05997 1499 aaPredicted RBP5.77□□□□□ -1.49
CDR1-201ENST00000370532 FAM83GA6ND36 823 aa5.77□□□□□ -1.49
CDR1-201ENST00000370532 TEX2Q8IWB9 1127 aa5.77□□□□□ -1.49
CDR1-201ENST00000370532 CDK19Q9BWU1 502 aa5.77□□□□□ -1.49
CDR1-201ENST00000370532 EIF4G2P78344 907 aaKnown RBP eCLIP5.76□□□□□ -1.49
CDR1-201ENST00000370532 KIF12Q96FN5 646 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 HIRIP3Q9BW71 556 aaPredicted RBP5.76□□□□□ -1.49
CDR1-201ENST00000370532 TRAK1Q9UPV9 953 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 NHSQ6T4R5 1651 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 ACEP12821 1306 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 SMAP1Q8IYB5 467 aaPredicted RBP5.76□□□□□ -1.49
CDR1-201ENST00000370532 CABP2Q9NPB3 220 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 CASZ1Q86V15 1759 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 OVOS2A0A0G2JMS6 1433 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 OVOS2A0A0J9YW53 1432 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 OVOS2Q6IE36 1432 aa5.76□□□□□ -1.49
CDR1-201ENST00000370532 MINK1Q8N4C8 1332 aaPredicted RBP5.76□□□□□ -1.49
CDR1-201ENST00000370532 PDE4AP27815 886 aa5.75□□□□□ -1.49
CDR1-201ENST00000370532 PSEN1P49768 467 aa5.75□□□□□ -1.49
CDR1-201ENST00000370532 NBPF1Q3BBV0 1214 aa5.75□□□□□ -1.49
CDR1-201ENST00000370532 KCNV2Q8TDN2 545 aa5.75□□□□□ -1.49
CDR1-201ENST00000370532 CARD11Q9BXL7 1154 aa5.75□□□□□ -1.49
CDR1-201ENST00000370532 PRDM11Q9NQV5 511 aa5.75□□□□□ -1.49
CDR1-201ENST00000370532 KIF24Q5T7B8 1368 aa5.75□□□□□ -1.49
CDR1-201ENST00000370532 KIAA0232Q92628 1395 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms