RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 VAMP4O75379 141 aa12.56□□□□□ -0.4
PRPF38B-201ENST00000370021 CCDC9Q9Y3X0 531 aaKnown RBP12.56□□□□□ -0.4
PRPF38B-201ENST00000370021 GOLGA6L6A8MZA4 724 aa12.55□□□□□ -0.4
PRPF38B-201ENST00000370021 C14orf37Q86TY3 774 aa12.55□□□□□ -0.4
PRPF38B-201ENST00000370021 ZNF500O60304 480 aaPredicted RBP12.55□□□□□ -0.4
PRPF38B-201ENST00000370021 FKBP5Q13451 457 aaPredicted RBP12.55□□□□□ -0.4
PRPF38B-201ENST00000370021 NUTM1Q86Y26 1132 aa12.55□□□□□ -0.4
PRPF38B-201ENST00000370021 DIAPH3Q9NSV4 1193 aa12.55□□□□□ -0.4
PRPF38B-201ENST00000370021 CPA1P15085 419 aa12.55□□□□□ -0.4
PRPF38B-201ENST00000370021 TPD52L1Q16890 204 aaPredicted RBP12.54□□□□□ -0.4
PRPF38B-201ENST00000370021 RTF1Q92541 710 aaKnown RBP12.54□□□□□ -0.4
PRPF38B-201ENST00000370021 KIAA1210Q9ULL0 1709 aa12.54□□□□□ -0.4
PRPF38B-201ENST00000370021 SMAP1Q8IYB5 467 aaPredicted RBP12.54□□□□□ -0.4
PRPF38B-201ENST00000370021 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
PRPF38B-201ENST00000370021 IFT172Q9UG01 1749 aa12.54□□□□□ -0.4
PRPF38B-201ENST00000370021 PLCD3Q8N3E9 789 aa12.54□□□□□ -0.4
PRPF38B-201ENST00000370021 FYB1O15117 783 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 PPFIA3O75145 1194 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 LTV1Q96GA3 475 aaPredicted RBP12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 STK31Q9BXU1 1019 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 ZRANB1Q9UGI0 708 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 VWDEQ8N2E2 1590 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 NEURL4Q96JN8 1562 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 TRPM2O94759 1503 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 MLECQ14165 292 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 ALDH1L2Q3SY69 923 aa12.53□□□□□ -0.4
PRPF38B-201ENST00000370021 TFIP11Q9UBB9 837 aaKnown RBP12.52□□□□□ -0.4
PRPF38B-201ENST00000370021 CLTCL1P53675 1640 aa12.52□□□□□ -0.4
PRPF38B-201ENST00000370021 SYNMO15061 1565 aa12.52□□□□□ -0.4
PRPF38B-201ENST00000370021 STK3Q13188 491 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 BICD2Q8TD16 824 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 PALD1Q9ULE6 856 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 ZDHHC9Q9Y397 364 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 SCAPERQ9BY12 1400 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 RIOK3O14730 519 aaKnown RBP12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 EIF2S2P20042 333 aaKnown RBP12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 NFE2L2Q16236 605 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 HS1BP3Q53T59 392 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 GORABQ5T7V8 394 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 SULT6B1Q6IMI4 303 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 FAM173BQ6P4H8 233 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 CWC27Q6UX04 472 aaKnown RBP12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 CCDC83Q8IWF9 413 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 CLASP1Q7Z460 1538 aa12.52□□□□□ -0.41
PRPF38B-201ENST00000370021 ATP2B3Q16720 1220 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 FILIP1Q7Z7B0 1213 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 TRMT1Q9NXH9 659 aaKnown RBP12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 PRDM4Q9UKN5 801 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 MCM5P33992 734 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 ZRSR1Q15695 479 aaKnown RBP12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 MYRIPQ8NFW9 859 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 SPG7Q9UQ90 795 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 WDR33Q9C0J8 1336 aaKnown RBP12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 ZFYVE16Q7Z3T8 1539 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 PPIP5K1Q6PFW1 1433 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 SURF6O75683 361 aaKnown RBP12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 DDIT3P35638 169 aa12.51□□□□□ -0.41
PRPF38B-201ENST00000370021 FCHSD2O94868 740 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 TCEANC2Q96MN5 208 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 NOS1P29475 1434 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 PTGS1P23219 599 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 ARAP3Q8WWN8 1544 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 TET3O43151 1660 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 ZBTB22O15209 634 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 CDK19Q9BWU1 502 aa12.5□□□□□ -0.41
PRPF38B-201ENST00000370021 INO80Q9ULG1 1556 aaPredicted RBP12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 FMNL2Q96PY5 1086 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 DCTPP1Q9H773 170 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 UHRF1BP1LA0JNW5 1464 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 MROH1Q8NDA8 1641 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 NAA30Q147X3 362 aaPredicted RBP12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 CCDC186Q7Z3E2 898 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 WAPLQ7Z5K2 1190 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 STAC3Q96MF2 364 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 DNM1Q05193 864 aaKnown RBP12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 CCDC183Q5T5S1 534 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 NECAB1Q8N987 351 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 CCDC112Q8NEF3 446 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 SYTL4Q96C24 671 aaPredicted RBP12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 TSPYL4Q9UJ04 414 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 PLCH2O75038 1416 aa12.49□□□□□ -0.41
PRPF38B-201ENST00000370021 GOLGA6L19H0YKK7 550 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 NME9Q86XW9 330 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 ABCA9Q8IUA7 1624 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 BECN2A8MW95 431 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 TNNT1P13805 278 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 TNNT3P45378 269 aaPredicted RBP12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 PDE1AP54750 535 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 LMOD3Q0VAK6 560 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 PTPRTO14522 1441 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 CHMP4AQ9BY43 222 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 LRRCC1Q9C099 1032 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 PYCARDQ9ULZ3 195 aa12.48□□□□□ -0.41
PRPF38B-201ENST00000370021 NPM1P06748 294 aaKnown RBP eCLIP12.47□□□□□ -0.41
PRPF38B-201ENST00000370021 LUZP1Q86V48 1076 aa12.47□□□□□ -0.41
PRPF38B-201ENST00000370021 RPAP2Q8IXW5 612 aaPredicted RBP12.47□□□□□ -0.41
PRPF38B-201ENST00000370021 COG3Q96JB2 828 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms