RNA–Protein interactions for RNA: ENST00000369893.9

SFXN2-201, Transcript of sideroflexin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SFXN2, Length 6,866 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN2-201ENST00000369893 DNAI2Q9GZS0 605 aa12.15□□□□□ -0.46
SFXN2-201ENST00000369893 C1orf115Q9H7X2 142 aa12.15□□□□□ -0.46
SFXN2-201ENST00000369893 PDRG1Q9NUG6 133 aa12.15□□□□□ -0.46
SFXN2-201ENST00000369893 MAP4K4O95819 1239 aaPredicted RBP12.15□□□□□ -0.46
SFXN2-201ENST00000369893 ZNF76P36508 570 aa12.15□□□□□ -0.46
SFXN2-201ENST00000369893 GSTTP1A0A1W2PQM5 241 aa12.15□□□□□ -0.46
SFXN2-201ENST00000369893 CFAP57Q96MR6 1250 aa12.15□□□□□ -0.46
SFXN2-201ENST00000369893 CEP131Q9UPN4 1083 aa12.15□□□□□ -0.47
SFXN2-201ENST00000369893 CCDC175P0C221 793 aa12.14□□□□□ -0.47
SFXN2-201ENST00000369893 ZSCAN25Q6NSZ9 544 aa12.14□□□□□ -0.47
SFXN2-201ENST00000369893 ZSCAN31Q96LW9 406 aaPredicted RBP12.14□□□□□ -0.47
SFXN2-201ENST00000369893 POLR3GO15318 223 aaPredicted RBP12.14□□□□□ -0.47
SFXN2-201ENST00000369893 PPP1R12BO60237 982 aaPredicted RBP12.14□□□□□ -0.47
SFXN2-201ENST00000369893 MAP3K11Q16584 847 aa12.14□□□□□ -0.47
SFXN2-201ENST00000369893 MIA2Q96PC5 1412 aa12.14□□□□□ -0.47
SFXN2-201ENST00000369893 RBM25P49756 843 aaKnown RBP12.14□□□□□ -0.47
SFXN2-201ENST00000369893 WASF1Q92558 559 aa12.14□□□□□ -0.47
SFXN2-201ENST00000369893 GRIPAP1Q4V328 841 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 FEZ1Q99689 392 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 RAI14Q9P0K7 980 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 BICRAQ9NZM4 1560 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 FKBP15Q5T1M5 1219 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 ZSCAN30Q86W11 494 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 KIF18AQ8NI77 898 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 PPP6R1Q9UPN7 881 aa12.13□□□□□ -0.47
SFXN2-201ENST00000369893 URI1O94763 535 aaPredicted RBP12.12□□□□□ -0.47
SFXN2-201ENST00000369893 KIF4BQ2VIQ3 1234 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 LARP1Q6PKG0 1096 aaKnown RBP12.12□□□□□ -0.47
SFXN2-201ENST00000369893 HOOK3Q86VS8 718 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 CTNNBL1Q8WYA6 563 aaPredicted RBP12.12□□□□□ -0.47
SFXN2-201ENST00000369893 TSG101Q99816 390 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 PPM1FP49593 454 aaPredicted RBP12.12□□□□□ -0.47
SFXN2-201ENST00000369893 C6orf163Q5TEZ5 329 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 TRERF1Q96PN7 1200 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 NLRP2Q9NX02 1062 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 SFPQP23246 707 aaKnown RBP eCLIP12.12□□□□□ -0.47
SFXN2-201ENST00000369893 CAMK4Q16566 473 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 BLOC1S2Q6QNY1 142 aa12.12□□□□□ -0.47
SFXN2-201ENST00000369893 POTEB2H3BUK9 544 aa12.11□□□□□ -0.47
SFXN2-201ENST00000369893 NOB1Q9ULX3 412 aaKnown RBP12.11□□□□□ -0.47
SFXN2-201ENST00000369893 PUS7Q96PZ0 661 aaKnown RBP12.11□□□□□ -0.47
SFXN2-201ENST00000369893 SPECC1LQ69YQ0 1117 aa12.11□□□□□ -0.47
SFXN2-201ENST00000369893 GTF2F1P35269 517 aaKnown RBP eCLIP12.11□□□□□ -0.472e-8■□□□□ 9.3
SFXN2-201ENST00000369893 CACNA2D4Q7Z3S7 1137 aa12.11□□□□□ -0.47
SFXN2-201ENST00000369893 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
SFXN2-201ENST00000369893 SYCE3A1L190 88 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 UBAC1Q9BSL1 405 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 SNAPC4Q5SXM2 1469 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 CTR9Q6PD62 1173 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 JAKMIP1Q96N16 626 aaKnown RBP12.1□□□□□ -0.47
SFXN2-201ENST00000369893 DHX57Q6P158 1386 aaKnown RBP12.1□□□□□ -0.47
SFXN2-201ENST00000369893 FERP16591 822 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 TAOK3Q9H2K8 898 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 SMARCC1Q92922 1105 aaPredicted RBP12.1□□□□□ -0.47
SFXN2-201ENST00000369893 PAFAH1B1P43034 410 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 BMS1Q14692 1282 aaKnown RBP12.1□□□□□ -0.47
SFXN2-201ENST00000369893 SIL1Q9H173 461 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 CNTLNQ9NXG0 1405 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 CCDC83Q8IWF9 413 aa12.1□□□□□ -0.47
SFXN2-201ENST00000369893 CIZ1Q9ULV3 898 aaPredicted RBP12.1□□□□□ -0.47
SFXN2-201ENST00000369893 DAAM2Q86T65 1068 aa12.09□□□□□ -0.47
SFXN2-201ENST00000369893 USO1O60763 962 aaKnown RBP12.09□□□□□ -0.47
SFXN2-201ENST00000369893 RBM5P52756 815 aaKnown RBP eCLIP12.09□□□□□ -0.474e-6■■■■□ 21.7
SFXN2-201ENST00000369893 RBM42Q9BTD8 480 aaKnown RBP12.09□□□□□ -0.47
SFXN2-201ENST00000369893 TOP1P11387 765 aaKnown RBP12.09□□□□□ -0.47
SFXN2-201ENST00000369893 SRCIN1Q9C0H9 1055 aa12.09□□□□□ -0.47
SFXN2-201ENST00000369893 TWISTNBQ3B726 338 aaPredicted RBP12.09□□□□□ -0.47
SFXN2-201ENST00000369893 TMX1Q9H3N1 280 aa12.09□□□□□ -0.47
SFXN2-201ENST00000369893 CTNNA3Q9UI47 895 aa12.09□□□□□ -0.47
SFXN2-201ENST00000369893 PRG4Q92954 1404 aaPredicted RBP12.09□□□□□ -0.47
SFXN2-201ENST00000369893 TDO2P48775 406 aa12.09□□□□□ -0.47
SFXN2-201ENST00000369893 MCM4P33991 863 aa12.08□□□□□ -0.47
SFXN2-201ENST00000369893 CCT4P50991 539 aaKnown RBP12.08□□□□□ -0.47
SFXN2-201ENST00000369893 SPECC1Q5M775 1068 aa12.08□□□□□ -0.47
SFXN2-201ENST00000369893 ANO10Q9NW15 660 aa12.08□□□□□ -0.47
SFXN2-201ENST00000369893 COMMD10Q9Y6G5 202 aa12.08□□□□□ -0.47
SFXN2-201ENST00000369893 DCAF8L1A6NGE4 600 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 PDIA4P13667 645 aaKnown RBP12.08□□□□□ -0.48
SFXN2-201ENST00000369893 DNA2P51530 1060 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 PIBF1Q8WXW3 757 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 NAA15Q9BXJ9 866 aaKnown RBP12.08□□□□□ -0.48
SFXN2-201ENST00000369893 GGNBP2Q9H3C7 697 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 HOMER2Q9NSB8 354 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 EXOSC9Q06265 439 aaKnown RBP12.08□□□□□ -0.48
SFXN2-201ENST00000369893 KRT32Q14532 448 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 USP5P45974 858 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP12.08□□□□□ -0.48
SFXN2-201ENST00000369893 CLIP2Q9UDT6 1046 aa12.08□□□□□ -0.48
SFXN2-201ENST00000369893 TMCO5BA8MYB1 307 aa12.07□□□□□ -0.48
SFXN2-201ENST00000369893 TNIP1Q15025 636 aa12.07□□□□□ -0.48
SFXN2-201ENST00000369893 FKBP4Q02790 459 aaKnown RBP eCLIP12.07□□□□□ -0.48
SFXN2-201ENST00000369893 PLEKHO1Q53GL0 409 aaPredicted RBP12.07□□□□□ -0.48
SFXN2-201ENST00000369893 NUP88Q99567 741 aaPredicted RBP12.07□□□□□ -0.48
SFXN2-201ENST00000369893 SERPINA10Q9UK55 444 aa12.07□□□□□ -0.48
SFXN2-201ENST00000369893 BRD4O60885 1362 aaPredicted RBP12.07□□□□□ -0.48
SFXN2-201ENST00000369893 FGFR1OPO95684 399 aaKnown RBP12.07□□□□□ -0.48
SFXN2-201ENST00000369893 NUTM2GQ5VZR2 741 aa12.07□□□□□ -0.48
SFXN2-201ENST00000369893 RRBP1Q9P2E9 1410 aaKnown RBP12.07□□□□□ -0.48
SFXN2-201ENST00000369893 CTNNA2P26232 953 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms