RNA–Protein interactions for RNA: ENST00000369643.5

FAM3A-204, Transcript of family with sequence similarity 3 member A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene FAM3A, Length 1,521 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-204ENST00000369643 PRKAR2BP31323 418 aa24.62■■□□□ 1.53
FAM3A-204ENST00000369643 RBM6P78332 1123 aaKnown RBP24.62■■□□□ 1.53
FAM3A-204ENST00000369643 PLEKHF1Q96S99 279 aa24.62■■□□□ 1.53
FAM3A-204ENST00000369643 VIRMAQ69YN4 1812 aaKnown RBP24.61■■□□□ 1.53
FAM3A-204ENST00000369643 IL2RBP14784 551 aa24.61■■□□□ 1.53
FAM3A-204ENST00000369643 NUDCQ9Y266 331 aa24.61■■□□□ 1.53
FAM3A-204ENST00000369643 ONECUT3O60422 494 aaPredicted RBP24.61■■□□□ 1.53
FAM3A-204ENST00000369643 FAM9BQ8IZU0 186 aa24.61■■□□□ 1.53
FAM3A-204ENST00000369643 THRAP3Q9Y2W1 955 aaKnown RBP24.61■■□□□ 1.53
FAM3A-204ENST00000369643 RXRBP28702 533 aa24.59■■□□□ 1.53
FAM3A-204ENST00000369643 TNS2Q63HR2 1409 aa24.59■■□□□ 1.53
FAM3A-204ENST00000369643 TOGARAM1Q9Y4F4 1720 aa24.58■■□□□ 1.53
FAM3A-204ENST00000369643 WDR43Q15061 677 aaKnown RBP eCLIP24.58■■□□□ 1.53
FAM3A-204ENST00000369643 FAM182BQ5T319 152 aa24.58■■□□□ 1.53
FAM3A-204ENST00000369643 SEPT12Q8IYM1 358 aa24.58■■□□□ 1.53
FAM3A-204ENST00000369643 RAPGEF4Q8WZA2 1011 aa24.56■■□□□ 1.52
FAM3A-204ENST00000369643 FCHSD2O94868 740 aa24.56■■□□□ 1.52
FAM3A-204ENST00000369643 TATP17735 454 aaPredicted RBP24.56■■□□□ 1.52
FAM3A-204ENST00000369643 MTHFSDQ2M296 383 aaKnown RBP24.56■■□□□ 1.52
FAM3A-204ENST00000369643 A0A0G2JS52 829 aa24.54■■□□□ 1.52
FAM3A-204ENST00000369643 CYP27B1O15528 508 aa24.54■■□□□ 1.52
FAM3A-204ENST00000369643 MYT1Q01538 1121 aa24.54■■□□□ 1.52
FAM3A-204ENST00000369643 MARCH10Q8NA82 808 aaPredicted RBP24.53■■□□□ 1.52
FAM3A-204ENST00000369643 DOT1LQ8TEK3 1739 aa24.51■■□□□ 1.51
FAM3A-204ENST00000369643 DDB1Q16531 1140 aa24.51■■□□□ 1.51
FAM3A-204ENST00000369643 ZCRB1Q8TBF4 217 aaKnown RBP24.51■■□□□ 1.51
FAM3A-204ENST00000369643 RRP7AQ9Y3A4 280 aaKnown RBP24.51■■□□□ 1.51
FAM3A-204ENST00000369643 SBF2Q86WG5 1849 aa24.5■■□□□ 1.51
FAM3A-204ENST00000369643 ADAMTS7Q9UKP4 1686 aa24.49■■□□□ 1.51
FAM3A-204ENST00000369643 SCN11AQ9UI33 1791 aa24.48■■□□□ 1.51
FAM3A-204ENST00000369643 KDM6AO15550 1401 aaPredicted RBP24.48■■□□□ 1.51
FAM3A-204ENST00000369643 DDX54Q8TDD1 881 aaKnown RBP24.48■■□□□ 1.51
FAM3A-204ENST00000369643 EXOC5O00471 708 aa24.47■■□□□ 1.51
FAM3A-204ENST00000369643 ZNF530Q6P9A1 599 aaPredicted RBP24.47■■□□□ 1.51
FAM3A-204ENST00000369643 CDCA7Q9BWT1 371 aaPredicted RBP24.47■■□□□ 1.51
FAM3A-204ENST00000369643 PHKG2P15735 406 aa24.46■■□□□ 1.51
FAM3A-204ENST00000369643 RUNDC1Q96C34 613 aa24.46■■□□□ 1.51
FAM3A-204ENST00000369643 ITGB4P16144 1822 aa24.46■■□□□ 1.51
FAM3A-204ENST00000369643 APAF1O14727 1248 aa24.45■■□□□ 1.51
FAM3A-204ENST00000369643 ILDR2Q71H61 639 aa24.45■■□□□ 1.51
FAM3A-204ENST00000369643 PLEKHO1Q53GL0 409 aaPredicted RBP24.45■■□□□ 1.5
FAM3A-204ENST00000369643 PCDH11XQ9BZA7 1347 aa24.44■■□□□ 1.5
FAM3A-204ENST00000369643 PCDH11YQ9BZA8 1340 aa24.44■■□□□ 1.5
FAM3A-204ENST00000369643 PTF1AQ7RTS3 328 aa24.44■■□□□ 1.5
FAM3A-204ENST00000369643 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.44■■□□□ 1.5
FAM3A-204ENST00000369643 DCTN1Q14203 1278 aa24.43■■□□□ 1.5
FAM3A-204ENST00000369643 SPG7Q9UQ90 795 aa24.43■■□□□ 1.5
FAM3A-204ENST00000369643 PLEKHG2Q9H7P9 1386 aa24.43■■□□□ 1.5
FAM3A-204ENST00000369643 TMPOP42166 694 aaKnown RBP24.42■■□□□ 1.5
FAM3A-204ENST00000369643 KRT27Q7Z3Y8 459 aa24.42■■□□□ 1.5
FAM3A-204ENST00000369643 LGR6Q9HBX8 967 aa24.42■■□□□ 1.5
FAM3A-204ENST00000369643 SIPA1L3O60292 1781 aaPredicted RBP24.42■■□□□ 1.5
FAM3A-204ENST00000369643 KAT6BQ8WYB5 2073 aa24.42■■□□□ 1.5
FAM3A-204ENST00000369643 NEUROD2Q15784 382 aa24.41■■□□□ 1.5
FAM3A-204ENST00000369643 NFE2L2Q16236 605 aa24.41■■□□□ 1.5
FAM3A-204ENST00000369643 MAPK8IP3Q9UPT6 1336 aa24.41■■□□□ 1.5
FAM3A-204ENST00000369643 MAP3K5Q99683 1374 aa24.41■■□□□ 1.5
FAM3A-204ENST00000369643 AMOTQ4VCS5 1084 aa24.4■■□□□ 1.5
FAM3A-204ENST00000369643 MPRIPQ6WCQ1 1025 aa24.4■■□□□ 1.5
FAM3A-204ENST00000369643 THUMPD2Q9BTF0 503 aaKnown RBP24.4■■□□□ 1.5
FAM3A-204ENST00000369643 TRIM35Q9UPQ4 493 aa24.4■■□□□ 1.5
FAM3A-204ENST00000369643 PDE3BQ13370 1112 aa24.39■■□□□ 1.49
FAM3A-204ENST00000369643 IFNL2Q8IZJ0 200 aa24.39■■□□□ 1.49
FAM3A-204ENST00000369643 SALL2Q9Y467 1007 aaPredicted RBP24.39■■□□□ 1.49
FAM3A-204ENST00000369643 NHSQ6T4R5 1651 aa24.39■■□□□ 1.49
FAM3A-204ENST00000369643 AKAP4Q5JQC9 854 aa24.38■■□□□ 1.49
FAM3A-204ENST00000369643 MCM10Q7L590 875 aa24.38■■□□□ 1.49
FAM3A-204ENST00000369643 IL17REQ8NFR9 667 aa24.38■■□□□ 1.49
FAM3A-204ENST00000369643 GAS2L2Q8NHY3 880 aa24.38■■□□□ 1.49
FAM3A-204ENST00000369643 ACSBG1Q96GR2 724 aa24.38■■□□□ 1.49
FAM3A-204ENST00000369643 NKX1-1Q15270 411 aaPredicted RBP24.37■■□□□ 1.49
FAM3A-204ENST00000369643 KCNQ2O43526 872 aa24.36■■□□□ 1.49
FAM3A-204ENST00000369643 RIPK4P57078 832 aa24.36■■□□□ 1.49
FAM3A-204ENST00000369643 TNS1Q9HBL0 1735 aaKnown RBP24.36■■□□□ 1.49
FAM3A-204ENST00000369643 MRC1P22897 1456 aa24.36■■□□□ 1.49
FAM3A-204ENST00000369643 RNMTO43148 476 aaKnown RBP24.35■■□□□ 1.49
FAM3A-204ENST00000369643 BTAF1O14981 1849 aa24.35■■□□□ 1.49
FAM3A-204ENST00000369643 GNAT3A8MTJ3 354 aa24.34■■□□□ 1.49
FAM3A-204ENST00000369643 C1orf141Q5JVX7 400 aa24.34■■□□□ 1.49
FAM3A-204ENST00000369643 CEMIPQ8WUJ3 1361 aa24.33■■□□□ 1.49
FAM3A-204ENST00000369643 PNNQ9H307 717 aaKnown RBP24.32■■□□□ 1.48
FAM3A-204ENST00000369643 BCL9O00512 1426 aa24.32■■□□□ 1.48
FAM3A-204ENST00000369643 PAPPAQ13219 1627 aa24.32■■□□□ 1.48
FAM3A-204ENST00000369643 PRIM1P49642 420 aaKnown RBP24.29■■□□□ 1.48
FAM3A-204ENST00000369643 DCAF5Q96JK2 942 aa24.29■■□□□ 1.48
FAM3A-204ENST00000369643 KDM3BQ7LBC6 1761 aa24.28■■□□□ 1.48
FAM3A-204ENST00000369643 NEFMP07197 916 aa24.27■■□□□ 1.48
FAM3A-204ENST00000369643 TRIM37O94972 964 aa24.26■■□□□ 1.47
FAM3A-204ENST00000369643 ZNF521Q96K83 1311 aa24.26■■□□□ 1.47
FAM3A-204ENST00000369643 PIGBQ92521 554 aa24.25■■□□□ 1.47
FAM3A-204ENST00000369643 SPINK5Q9NQ38 1064 aaPredicted RBP24.25■■□□□ 1.47
FAM3A-204ENST00000369643 FAM196AQ6ZSG2 479 aa24.25■■□□□ 1.47
FAM3A-204ENST00000369643 WWC1Q8IX03 1113 aa24.25■■□□□ 1.47
FAM3A-204ENST00000369643 NFATC2IPQ8NCF5 419 aa24.25■■□□□ 1.47
FAM3A-204ENST00000369643 SYTL4Q96C24 671 aaPredicted RBP24.25■■□□□ 1.47
FAM3A-204ENST00000369643 MIS18AQ9NYP9 233 aa24.25■■□□□ 1.47
FAM3A-204ENST00000369643 UBR2Q8IWV8 1755 aa24.24■■□□□ 1.47
FAM3A-204ENST00000369643 KCNQ3O43525 872 aa24.24■■□□□ 1.47
FAM3A-204ENST00000369643 SLC52A2Q9HAB3 445 aa24.24■■□□□ 1.47
FAM3A-204ENST00000369643 HNRNPUQ00839 825 aaKnown RBP eCLIP24.23■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms