RNA–Protein interactions for RNA: ENST00000369604.5

PHTF1-204, Transcript of putative homeodomain transcription factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PHTF1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-204ENST00000369604 IGSF3O75054 1194 aa17.43■□□□□ 0.38
PHTF1-204ENST00000369604 HCLS1P14317 486 aaPredicted RBP17.43■□□□□ 0.38
PHTF1-204ENST00000369604 MCCP23508 829 aa17.43■□□□□ 0.38
PHTF1-204ENST00000369604 USP48Q86UV5 1035 aa17.43■□□□□ 0.38
PHTF1-204ENST00000369604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP17.43■□□□□ 0.38
PHTF1-204ENST00000369604 FAM184AQ8NB25 1140 aa17.43■□□□□ 0.38
PHTF1-204ENST00000369604 MINK1Q8N4C8 1332 aaPredicted RBP17.43■□□□□ 0.38
PHTF1-204ENST00000369604 GTPBP4Q9BZE4 634 aaKnown RBP17.43■□□□□ 0.38
PHTF1-204ENST00000369604 BCL2L12Q9HB09 334 aa17.42■□□□□ 0.38
PHTF1-204ENST00000369604 ABCC1P33527 1531 aa17.42■□□□□ 0.38
PHTF1-204ENST00000369604 PTCH1Q13635 1447 aa17.42■□□□□ 0.38
PHTF1-204ENST00000369604 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
PHTF1-204ENST00000369604 MCM2P49736 904 aa17.41■□□□□ 0.38
PHTF1-204ENST00000369604 ANKRD44Q8N8A2 993 aa17.41■□□□□ 0.38
PHTF1-204ENST00000369604 ANO2Q9NQ90 1003 aa17.41■□□□□ 0.38
PHTF1-204ENST00000369604 IFT57Q9NWB7 429 aa17.41■□□□□ 0.38
PHTF1-204ENST00000369604 HDGFL2Q7Z4V5 671 aaPredicted RBP17.41■□□□□ 0.38
PHTF1-204ENST00000369604 UPF3BQ9BZI7 483 aaKnown RBP17.41■□□□□ 0.38
PHTF1-204ENST00000369604 PIK3R4Q99570 1358 aa17.4■□□□□ 0.38
PHTF1-204ENST00000369604 UVSSAQ2YD98 709 aa17.4■□□□□ 0.38
PHTF1-204ENST00000369604 KIF1BO60333 1816 aa17.4■□□□□ 0.38
PHTF1-204ENST00000369604 TSHZ3Q63HK5 1081 aa17.4■□□□□ 0.38
PHTF1-204ENST00000369604 RPAP2Q8IXW5 612 aaPredicted RBP17.4■□□□□ 0.38
PHTF1-204ENST00000369604 MYO3AQ8NEV4 1616 aa17.4■□□□□ 0.38
PHTF1-204ENST00000369604 SPC24Q8NBT2 197 aa17.39■□□□□ 0.37
PHTF1-204ENST00000369604 PUS7Q96PZ0 661 aaKnown RBP17.39■□□□□ 0.37
PHTF1-204ENST00000369604 CEP85Q6P2H3 762 aa17.39■□□□□ 0.37
PHTF1-204ENST00000369604 RILPL2Q969X0 211 aa17.39■□□□□ 0.37
PHTF1-204ENST00000369604 DIAPH3Q9NSV4 1193 aa17.39■□□□□ 0.37
PHTF1-204ENST00000369604 TRIM6-TRIM34B2RNG4 842 aa17.38■□□□□ 0.37
PHTF1-204ENST00000369604 DCTN1Q14203 1278 aa17.38■□□□□ 0.37
PHTF1-204ENST00000369604 CYB5RLQ6IPT4 315 aa17.38■□□□□ 0.37
PHTF1-204ENST00000369604 U2AF2P26368 475 aaKnown RBP eCLIP17.38■□□□□ 0.37
PHTF1-204ENST00000369604 FAM83GA6ND36 823 aa17.38■□□□□ 0.37
PHTF1-204ENST00000369604 KIF20AO95235 890 aa17.38■□□□□ 0.37
PHTF1-204ENST00000369604 FKBP5Q13451 457 aaPredicted RBP17.38■□□□□ 0.37
PHTF1-204ENST00000369604 CCDC183Q5T5S1 534 aa17.38■□□□□ 0.37
PHTF1-204ENST00000369604 GTF2F1P35269 517 aaKnown RBP eCLIP17.37■□□□□ 0.37
PHTF1-204ENST00000369604 ZFYVE16Q7Z3T8 1539 aa17.37■□□□□ 0.37
PHTF1-204ENST00000369604 WDR33Q9C0J8 1336 aaKnown RBP17.37■□□□□ 0.37
PHTF1-204ENST00000369604 LETM1O95202 739 aaPredicted RBP17.37■□□□□ 0.37
PHTF1-204ENST00000369604 NPM1P06748 294 aaKnown RBP eCLIP17.37■□□□□ 0.37
PHTF1-204ENST00000369604 PALD1Q9ULE6 856 aa17.37■□□□□ 0.37
PHTF1-204ENST00000369604 USP32Q8NFA0 1604 aa17.37■□□□□ 0.37
PHTF1-204ENST00000369604 RIOK3O14730 519 aaKnown RBP17.36■□□□□ 0.37
PHTF1-204ENST00000369604 VGFO15240 615 aaPredicted RBP17.36■□□□□ 0.37
PHTF1-204ENST00000369604 ZNF771Q7L3S4 317 aaPredicted RBP17.36■□□□□ 0.37
PHTF1-204ENST00000369604 NRXN1Q9ULB1 1477 aa17.36■□□□□ 0.37
PHTF1-204ENST00000369604 KRT24Q2M2I5 525 aa17.36■□□□□ 0.37
PHTF1-204ENST00000369604 MEIS3Q99687 375 aa17.36■□□□□ 0.37
PHTF1-204ENST00000369604 COL3A1P02461 1466 aaPredicted RBP17.35■□□□□ 0.37
PHTF1-204ENST00000369604 HMMRO75330 724 aa17.35■□□□□ 0.37
PHTF1-204ENST00000369604 SLC4A10Q6U841 1118 aa17.35■□□□□ 0.37
PHTF1-204ENST00000369604 CNPY2Q9Y2B0 182 aa17.35■□□□□ 0.37
PHTF1-204ENST00000369604 CFAP65Q6ZU64 1925 aaKnown RBP17.35■□□□□ 0.37
PHTF1-204ENST00000369604 REREQ9P2R6 1566 aa17.35■□□□□ 0.37
PHTF1-204ENST00000369604 FIBPO43427 364 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 KDM4AO75164 1064 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 PDE1AP54750 535 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 CUL4AQ13619 759 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 PLPPR3Q6T4P5 718 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.34■□□□□ 0.37
PHTF1-204ENST00000369604 RAPGEF3O95398 923 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 INTS4Q96HW7 963 aaKnown RBP17.34■□□□□ 0.37
PHTF1-204ENST00000369604 CABP1Q9NZU7 370 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 SETBP1Q9Y6X0 1596 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 MX1P20591 662 aa17.34■□□□□ 0.37
PHTF1-204ENST00000369604 TULP4Q9NRJ4 1543 aa17.33■□□□□ 0.37
PHTF1-204ENST00000369604 LMOD3Q0VAK6 560 aa17.33■□□□□ 0.37
PHTF1-204ENST00000369604 GIMAP6Q6P9H5 292 aa17.33■□□□□ 0.37
PHTF1-204ENST00000369604 ESYT1Q9BSJ8 1104 aa17.33■□□□□ 0.37
PHTF1-204ENST00000369604 SPTLC3Q9NUV7 552 aa17.33■□□□□ 0.37
PHTF1-204ENST00000369604 POLKQ9UBT6 870 aa17.33■□□□□ 0.37
PHTF1-204ENST00000369604 PYCARDQ9ULZ3 195 aa17.33■□□□□ 0.36
PHTF1-204ENST00000369604 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
PHTF1-204ENST00000369604 EXOC6BQ9Y2D4 811 aa17.32■□□□□ 0.36
PHTF1-204ENST00000369604 MROH2AA6NES4 1674 aa17.32■□□□□ 0.36
PHTF1-204ENST00000369604 PRAM1Q96QH2 718 aa17.32■□□□□ 0.36
PHTF1-204ENST00000369604 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
PHTF1-204ENST00000369604 RPGRIP1LQ68CZ1 1315 aa17.32■□□□□ 0.36
PHTF1-204ENST00000369604 GOLGA6L6A8MZA4 724 aa17.31■□□□□ 0.36
PHTF1-204ENST00000369604 ZNF853P0CG23 659 aa17.31■□□□□ 0.36
PHTF1-204ENST00000369604 PPRC1Q5VV67 1664 aaKnown RBP17.31■□□□□ 0.36
PHTF1-204ENST00000369604 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
PHTF1-204ENST00000369604 FGD1P98174 961 aa17.31■□□□□ 0.36
PHTF1-204ENST00000369604 BBXQ8WY36 941 aaPredicted RBP17.31■□□□□ 0.36
PHTF1-204ENST00000369604 LARP6Q9BRS8 491 aaKnown RBP17.31■□□□□ 0.36
PHTF1-204ENST00000369604 EMILIN1Q9Y6C2 1016 aa17.31■□□□□ 0.36
PHTF1-204ENST00000369604 ADGRB1O14514 1584 aa17.31■□□□□ 0.36
PHTF1-204ENST00000369604 LRRC7Q96NW7 1537 aa17.3■□□□□ 0.36
PHTF1-204ENST00000369604 NEURL4Q96JN8 1562 aa17.3■□□□□ 0.36
PHTF1-204ENST00000369604 KIAA1524Q8TCG1 905 aa17.3■□□□□ 0.36
PHTF1-204ENST00000369604 FAM135BQ49AJ0 1406 aa17.3■□□□□ 0.36
PHTF1-204ENST00000369604 DEPDC5O75140 1603 aa17.3■□□□□ 0.36
PHTF1-204ENST00000369604 DRC7Q8IY82 874 aa17.29■□□□□ 0.36
PHTF1-204ENST00000369604 MSH6P52701 1360 aa17.29■□□□□ 0.36
PHTF1-204ENST00000369604 CGNQ9P2M7 1197 aaKnown RBP17.29■□□□□ 0.36
PHTF1-204ENST00000369604 PNPLA6Q8IY17 1366 aa17.29■□□□□ 0.36
PHTF1-204ENST00000369604 UBE2HP62256 183 aa17.29■□□□□ 0.36
PHTF1-204ENST00000369604 CHMP3Q9Y3E7 222 aa17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms