RNA–Protein interactions for RNA: ENST00000368962.6

SETDB1-202, Transcript of SET domain bifurcated 1, humanhuman

TSL 1 (best) BASIC

Gene SETDB1, Length 1,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-202ENST00000368962 SPG7Q9UQ90 795 aa16.96■□□□□ 0.31
SETDB1-202ENST00000368962 CCDC9Q9Y3X0 531 aaKnown RBP16.96■□□□□ 0.31
SETDB1-202ENST00000368962 CCDC146Q8IYE0 955 aa16.95■□□□□ 0.3
SETDB1-202ENST00000368962 PHACTR3Q96KR7 559 aa16.95■□□□□ 0.3
SETDB1-202ENST00000368962 PARP4Q9UKK3 1724 aaKnown RBP16.94■□□□□ 0.3
SETDB1-202ENST00000368962 APAF1O14727 1248 aa16.94■□□□□ 0.3
SETDB1-202ENST00000368962 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
SETDB1-202ENST00000368962 TMPOP42166 694 aaKnown RBP16.94■□□□□ 0.3
SETDB1-202ENST00000368962 CCDC27Q2M243 656 aa16.94■□□□□ 0.3
SETDB1-202ENST00000368962 USP35Q9P2H5 1018 aa16.94■□□□□ 0.3
SETDB1-202ENST00000368962 DISP2A7MBM2 1401 aa16.94■□□□□ 0.3
SETDB1-202ENST00000368962 NFE2L2Q16236 605 aa16.93■□□□□ 0.3
SETDB1-202ENST00000368962 OVOS2A0A0G2JMS6 1433 aa16.93■□□□□ 0.3
SETDB1-202ENST00000368962 EXOC5O00471 708 aa16.93■□□□□ 0.3
SETDB1-202ENST00000368962 LMOD3Q0VAK6 560 aa16.93■□□□□ 0.3
SETDB1-202ENST00000368962 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
SETDB1-202ENST00000368962 MTHFSDQ2M296 383 aaKnown RBP16.92■□□□□ 0.3
SETDB1-202ENST00000368962 MEGF6O75095 1541 aa16.91■□□□□ 0.3
SETDB1-202ENST00000368962 WNK3Q9BYP7 1800 aa16.91■□□□□ 0.3
SETDB1-202ENST00000368962 RIPK4P57078 832 aa16.91■□□□□ 0.3
SETDB1-202ENST00000368962 RBM6P78332 1123 aaKnown RBP16.91■□□□□ 0.3
SETDB1-202ENST00000368962 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
SETDB1-202ENST00000368962 PKD1L3Q7Z443 1732 aa16.91■□□□□ 0.3
SETDB1-202ENST00000368962 HSP90AB1P08238 724 aaKnown RBP16.9■□□□□ 0.3
SETDB1-202ENST00000368962 IFNL2Q8IZJ0 200 aa16.9■□□□□ 0.3
SETDB1-202ENST00000368962 PHF23Q9BUL5 403 aaPredicted RBP16.9■□□□□ 0.3
SETDB1-202ENST00000368962 PCDH11XQ9BZA7 1347 aa16.89■□□□□ 0.29
SETDB1-202ENST00000368962 PCDH11YQ9BZA8 1340 aa16.89■□□□□ 0.29
SETDB1-202ENST00000368962 GNAT3A8MTJ3 354 aa16.89■□□□□ 0.29
SETDB1-202ENST00000368962 HNRNPUQ00839 825 aaKnown RBP eCLIP16.89■□□□□ 0.29
SETDB1-202ENST00000368962 C1orf141Q5JVX7 400 aa16.89■□□□□ 0.29
SETDB1-202ENST00000368962 DLG5Q8TDM6 1919 aa16.89■□□□□ 0.29
SETDB1-202ENST00000368962 DDB1Q16531 1140 aa16.88■□□□□ 0.29
SETDB1-202ENST00000368962 GLI3P10071 1580 aa16.88■□□□□ 0.29
SETDB1-202ENST00000368962 CALD1Q05682 793 aaKnown RBP16.87■□□□□ 0.29
SETDB1-202ENST00000368962 NKX1-1Q15270 411 aaPredicted RBP16.87■□□□□ 0.29
SETDB1-202ENST00000368962 FAM98CQ17RN3 349 aaKnown RBP16.87■□□□□ 0.29
SETDB1-202ENST00000368962 ZNF530Q6P9A1 599 aaPredicted RBP16.87■□□□□ 0.29
SETDB1-202ENST00000368962 RTF1Q92541 710 aaKnown RBP16.87■□□□□ 0.29
SETDB1-202ENST00000368962 ZBED9Q6R2W3 1325 aa16.87■□□□□ 0.29
SETDB1-202ENST00000368962 PHKG2P15735 406 aa16.86■□□□□ 0.29
SETDB1-202ENST00000368962 RXRBP28702 533 aa16.86■□□□□ 0.29
SETDB1-202ENST00000368962 WDR63Q8IWG1 891 aa16.86■□□□□ 0.29
SETDB1-202ENST00000368962 RGS17Q9UGC6 210 aaPredicted RBP16.86■□□□□ 0.29
SETDB1-202ENST00000368962 MAP3K5Q99683 1374 aa16.86■□□□□ 0.29
SETDB1-202ENST00000368962 WWC1Q8IX03 1113 aa16.86■□□□□ 0.29
SETDB1-202ENST00000368962 TRIM35Q9UPQ4 493 aa16.86■□□□□ 0.29
SETDB1-202ENST00000368962 TNS2Q63HR2 1409 aa16.85■□□□□ 0.29
SETDB1-202ENST00000368962 CYP27B1O15528 508 aa16.85■□□□□ 0.29
SETDB1-202ENST00000368962 PDE3BQ13370 1112 aa16.85■□□□□ 0.29
SETDB1-202ENST00000368962 NEUROD2Q15784 382 aa16.85■□□□□ 0.29
SETDB1-202ENST00000368962 DCAF5Q96JK2 942 aa16.85■□□□□ 0.29
SETDB1-202ENST00000368962 THSD7AQ9UPZ6 1657 aa16.84■□□□□ 0.29
SETDB1-202ENST00000368962 RRP7AQ9Y3A4 280 aaKnown RBP16.84■□□□□ 0.29
SETDB1-202ENST00000368962 ZNF521Q96K83 1311 aa16.84■□□□□ 0.29
SETDB1-202ENST00000368962 IL16Q14005 1332 aa16.83■□□□□ 0.28
SETDB1-202ENST00000368962 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
SETDB1-202ENST00000368962 SEPT12Q8IYM1 358 aa16.82■□□□□ 0.28
SETDB1-202ENST00000368962 DDX54Q8TDD1 881 aaKnown RBP16.82■□□□□ 0.28
SETDB1-202ENST00000368962 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
SETDB1-202ENST00000368962 IL17REQ8NFR9 667 aa16.81■□□□□ 0.28
SETDB1-202ENST00000368962 BABAM1Q9NWV8 329 aa16.81■□□□□ 0.28
SETDB1-202ENST00000368962 LRRC37A3O60309 1634 aa16.81■□□□□ 0.28
SETDB1-202ENST00000368962 ADAMTS7Q9UKP4 1686 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 ERVV-2B6SEH9 535 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 RNMTO43148 476 aaKnown RBP16.8■□□□□ 0.28
SETDB1-202ENST00000368962 GOLGA2Q08379 1002 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 SCN11AQ9UI33 1791 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 VIRMAQ69YN4 1812 aaKnown RBP16.8■□□□□ 0.28
SETDB1-202ENST00000368962 KAT6BQ8WYB5 2073 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 BCL9O00512 1426 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 A0A0G2JS52 829 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 MYT1Q01538 1121 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 POTEAQ6S8J7 498 aa16.8■□□□□ 0.28
SETDB1-202ENST00000368962 SALL2Q9Y467 1007 aaPredicted RBP16.8■□□□□ 0.28
SETDB1-202ENST00000368962 MPRIPQ6WCQ1 1025 aa16.79■□□□□ 0.28
SETDB1-202ENST00000368962 MCM10Q7L590 875 aa16.78■□□□□ 0.28
SETDB1-202ENST00000368962 MARCH10Q8NA82 808 aaPredicted RBP16.78■□□□□ 0.28
SETDB1-202ENST00000368962 CFAP44Q96MT7 982 aa16.78■□□□□ 0.28
SETDB1-202ENST00000368962 YTHDC1Q96MU7 727 aaKnown RBP16.78■□□□□ 0.28
SETDB1-202ENST00000368962 LGR6Q9HBX8 967 aa16.78■□□□□ 0.28
SETDB1-202ENST00000368962 E9PSI1 815 aa16.77■□□□□ 0.28
SETDB1-202ENST00000368962 GNAI1P63096 354 aa16.77■□□□□ 0.28
SETDB1-202ENST00000368962 TEFQ10587 303 aa16.77■□□□□ 0.28
SETDB1-202ENST00000368962 TAF7Q15545 349 aaPredicted RBP16.77■□□□□ 0.28
SETDB1-202ENST00000368962 IFT57Q9NWB7 429 aa16.77■□□□□ 0.28
SETDB1-202ENST00000368962 KRT27Q7Z3Y8 459 aa16.76■□□□□ 0.27
SETDB1-202ENST00000368962 SLC52A2Q9HAB3 445 aa16.76■□□□□ 0.27
SETDB1-202ENST00000368962 ZNF853P0CG23 659 aa16.75■□□□□ 0.27
SETDB1-202ENST00000368962 DCTN1Q14203 1278 aa16.75■□□□□ 0.27
SETDB1-202ENST00000368962 MYH16Q9H6N6 1097 aa16.75■□□□□ 0.27
SETDB1-202ENST00000368962 KDM6AO15550 1401 aaPredicted RBP16.74■□□□□ 0.27
SETDB1-202ENST00000368962 CHL1O00533 1208 aa16.74■□□□□ 0.27
SETDB1-202ENST00000368962 SLFN5Q08AF3 891 aa16.74■□□□□ 0.27
SETDB1-202ENST00000368962 TRMT2AQ8IZ69 625 aaKnown RBP16.74■□□□□ 0.27
SETDB1-202ENST00000368962 CABP4P57796 275 aa16.73■□□□□ 0.27
SETDB1-202ENST00000368962 FAM196AQ6ZSG2 479 aa16.73■□□□□ 0.27
SETDB1-202ENST00000368962 BRWD3Q6RI45 1802 aa16.73■□□□□ 0.27
SETDB1-202ENST00000368962 MRC1P22897 1456 aa16.73■□□□□ 0.27
SETDB1-202ENST00000368962 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms