RNA–Protein interactions for RNA: ENST00000368843.7

SNX27-203, Transcript of sorting nexin family member 27, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNX27, Length 7,197 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27-203ENST00000368843 CDKL5O76039 1030 aa21.16■□□□□ 0.98
SNX27-203ENST00000368843 IL1RAPL2Q9NP60 686 aa21.16■□□□□ 0.98
SNX27-203ENST00000368843 KIAA1107Q9UPP5 1409 aa21.16■□□□□ 0.98
SNX27-203ENST00000368843 AIDAQ96BJ3 306 aa21.16■□□□□ 0.98
SNX27-203ENST00000368843 ERLIN2O94905 339 aa21.15■□□□□ 0.98
SNX27-203ENST00000368843 PDRG1Q9NUG6 133 aa21.15■□□□□ 0.98
SNX27-203ENST00000368843 FANCIQ9NVI1 1328 aa21.15■□□□□ 0.98
SNX27-203ENST00000368843 PAXIP1Q6ZW49 1069 aaPredicted RBP21.15■□□□□ 0.98
SNX27-203ENST00000368843 NESP48681 1621 aa21.15■□□□□ 0.98
SNX27-203ENST00000368843 SUPT6HQ7KZ85 1726 aaKnown RBP21.15■□□□□ 0.98
SNX27-203ENST00000368843 JAKMIP1Q96N16 626 aaKnown RBP21.15■□□□□ 0.98
SNX27-203ENST00000368843 H0YHG0 523 aa21.14■□□□□ 0.98
SNX27-203ENST00000368843 LARP1BQ659C4 914 aaKnown RBP21.14■□□□□ 0.98
SNX27-203ENST00000368843 NUDT16Q96DE0 195 aaKnown RBP21.14■□□□□ 0.98
SNX27-203ENST00000368843 NOM1Q5C9Z4 860 aaKnown RBP21.14■□□□□ 0.98
SNX27-203ENST00000368843 BLOC1S2Q6QNY1 142 aa21.14■□□□□ 0.98
SNX27-203ENST00000368843 CRACR2BQ8N4Y2 399 aaPredicted RBP21.14■□□□□ 0.98
SNX27-203ENST00000368843 POLR3DP05423 398 aaPredicted RBP21.14■□□□□ 0.97
SNX27-203ENST00000368843 SEPT7Q16181 437 aaKnown RBP21.14■□□□□ 0.97
SNX27-203ENST00000368843 BMP2KQ9NSY1 1161 aaPredicted RBP21.14■□□□□ 0.97
SNX27-203ENST00000368843 CTNNA3Q9UI47 895 aa21.14■□□□□ 0.97
SNX27-203ENST00000368843 NEBLO76041 1014 aa21.14■□□□□ 0.97
SNX27-203ENST00000368843 IFT140Q96RY7 1462 aa21.14■□□□□ 0.97
SNX27-203ENST00000368843 TTLL12Q14166 644 aaPredicted RBP21.14■□□□□ 0.97
SNX27-203ENST00000368843 CCDC181Q5TID7 509 aa21.13■□□□□ 0.97
SNX27-203ENST00000368843 ZNF219Q9P2Y4 722 aaPredicted RBP21.13■□□□□ 0.97
SNX27-203ENST00000368843 ATF7IPQ6VMQ6 1270 aa21.13■□□□□ 0.97
SNX27-203ENST00000368843 WDR63Q8IWG1 891 aa21.13■□□□□ 0.97
SNX27-203ENST00000368843 LUC7LQ9NQ29 371 aaKnown RBP21.13■□□□□ 0.97
SNX27-203ENST00000368843 USHBP1Q8N6Y0 703 aa21.13■□□□□ 0.97
SNX27-203ENST00000368843 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
SNX27-203ENST00000368843 CAVIN4Q5BKX8 364 aa21.12■□□□□ 0.97
SNX27-203ENST00000368843 NUTM1Q86Y26 1132 aa21.12■□□□□ 0.97
SNX27-203ENST00000368843 FAM193AP78312 1265 aa21.12■□□□□ 0.97
SNX27-203ENST00000368843 MRE11P49959 708 aa21.12■□□□□ 0.97
SNX27-203ENST00000368843 PDE3AQ14432 1141 aa21.12■□□□□ 0.97
SNX27-203ENST00000368843 CHD1LQ86WJ1 897 aa21.12■□□□□ 0.97
SNX27-203ENST00000368843 BRPF3Q9ULD4 1205 aa21.12■□□□□ 0.97
SNX27-203ENST00000368843 MYCNP04198 464 aaPredicted RBP21.11■□□□□ 0.97
SNX27-203ENST00000368843 ATAD2Q6PL18 1390 aa21.11■□□□□ 0.97
SNX27-203ENST00000368843 IMMTQ16891 758 aaKnown RBP21.11■□□□□ 0.97
SNX27-203ENST00000368843 MPRIPQ6WCQ1 1025 aa21.11■□□□□ 0.97
SNX27-203ENST00000368843 AXDND1Q5T1B0 1012 aaPredicted RBP21.11■□□□□ 0.97
SNX27-203ENST00000368843 CEP57L1Q8IYX8 460 aa21.11■□□□□ 0.97
SNX27-203ENST00000368843 SCLT1Q96NL6 688 aa21.11■□□□□ 0.97
SNX27-203ENST00000368843 MYD88Q99836 296 aa21.11■□□□□ 0.97
SNX27-203ENST00000368843 SEC63Q9UGP8 760 aaKnown RBP21.11■□□□□ 0.97
SNX27-203ENST00000368843 MVPQ14764 893 aaKnown RBP21.1■□□□□ 0.97
SNX27-203ENST00000368843 MINDY4BA8MYZ0 360 aa21.1■□□□□ 0.97
SNX27-203ENST00000368843 CCDC192P0DO97 292 aa21.1■□□□□ 0.97
SNX27-203ENST00000368843 NSD3Q9BZ95 1437 aa21.1■□□□□ 0.97
SNX27-203ENST00000368843 CENPHQ9H3R5 247 aa21.1■□□□□ 0.97
SNX27-203ENST00000368843 KRT85P78386 507 aa21.09■□□□□ 0.97
SNX27-203ENST00000368843 WAPLQ7Z5K2 1190 aa21.09■□□□□ 0.97
SNX27-203ENST00000368843 MCM10Q7L590 875 aa21.09■□□□□ 0.97
SNX27-203ENST00000368843 WDR33Q9C0J8 1336 aaKnown RBP21.09■□□□□ 0.97
SNX27-203ENST00000368843 DESP17661 470 aa21.09■□□□□ 0.97
SNX27-203ENST00000368843 MKNK2Q9HBH9 465 aa21.09■□□□□ 0.97
SNX27-203ENST00000368843 SSR1P43307 286 aaKnown RBP21.08■□□□□ 0.97
SNX27-203ENST00000368843 RPGRQ92834 1020 aaKnown RBP21.08■□□□□ 0.97
SNX27-203ENST00000368843 ZRSR2Q15696 482 aaKnown RBP21.08■□□□□ 0.97
SNX27-203ENST00000368843 DZIP1Q86YF9 867 aaKnown RBP21.08■□□□□ 0.97
SNX27-203ENST00000368843 SPATA32Q96LK8 384 aa21.08■□□□□ 0.96
SNX27-203ENST00000368843 RPGRIP1LQ68CZ1 1315 aa21.08■□□□□ 0.96
SNX27-203ENST00000368843 TNIP1Q15025 636 aa21.08■□□□□ 0.96
SNX27-203ENST00000368843 CCDC191Q8NCU4 936 aa21.08■□□□□ 0.96
SNX27-203ENST00000368843 WASF1Q92558 559 aa21.07■□□□□ 0.96
SNX27-203ENST00000368843 K7ELQ4 463 aaPredicted RBP21.07■□□□□ 0.96
SNX27-203ENST00000368843 EPRSP07814 1512 aaKnown RBP21.07■□□□□ 0.96
SNX27-203ENST00000368843 MAPK8IP2Q13387 824 aaPredicted RBP21.07■□□□□ 0.96
SNX27-203ENST00000368843 ENOX2Q16206 610 aaKnown RBP21.07■□□□□ 0.96
SNX27-203ENST00000368843 TSPYL1Q9H0U9 437 aa21.07■□□□□ 0.96
SNX27-203ENST00000368843 AKAP2Q9Y2D5 859 aa21.07■□□□□ 0.96
SNX27-203ENST00000368843 ZNF287Q9HBT7 754 aa21.07■□□□□ 0.96
SNX27-203ENST00000368843 GOLGA6L10A6NI86 522 aa21.06■□□□□ 0.96
SNX27-203ENST00000368843 NFE2L2Q16236 605 aa21.06■□□□□ 0.96
SNX27-203ENST00000368843 WDR78Q5VTH9 848 aa21.06■□□□□ 0.96
SNX27-203ENST00000368843 ANKRD18AQ8IVF6 992 aa21.06■□□□□ 0.96
SNX27-203ENST00000368843 EFCAB5A4FU69 1503 aa21.06■□□□□ 0.96
SNX27-203ENST00000368843 HMGB2P26583 209 aaKnown RBP21.06■□□□□ 0.96
SNX27-203ENST00000368843 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
SNX27-203ENST00000368843 TRIM21P19474 475 aaKnown RBP21.06■□□□□ 0.96
SNX27-203ENST00000368843 CASTP20810 708 aaKnown RBP21.06■□□□□ 0.96
SNX27-203ENST00000368843 TXLNBQ8N3L3 684 aa21.06■□□□□ 0.96
SNX27-203ENST00000368843 ANKRD30BQ9BXX2 1392 aa21.05■□□□□ 0.96
SNX27-203ENST00000368843 CT47B1P0C2W7 299 aaPredicted RBP21.05■□□□□ 0.96
SNX27-203ENST00000368843 DUSP27Q5VZP5 1158 aa21.05■□□□□ 0.96
SNX27-203ENST00000368843 HSP90AB3PQ58FF7 597 aa21.05■□□□□ 0.96
SNX27-203ENST00000368843 CC2D2AQ9P2K1 1620 aa21.05■□□□□ 0.96
SNX27-203ENST00000368843 AKNAQ7Z591 1439 aa21.05■□□□□ 0.96
SNX27-203ENST00000368843 FCHSD2O94868 740 aa21.05■□□□□ 0.96
SNX27-203ENST00000368843 NGLY1Q96IV0 654 aa21.04■□□□□ 0.96
SNX27-203ENST00000368843 CBFA2T2O43439 604 aa21.04■□□□□ 0.96
SNX27-203ENST00000368843 IFIT1P09914 478 aaKnown RBP21.04■□□□□ 0.96
SNX27-203ENST00000368843 WDHD1O75717 1129 aaPredicted RBP21.04■□□□□ 0.96
SNX27-203ENST00000368843 KRT32Q14532 448 aa21.04■□□□□ 0.96
SNX27-203ENST00000368843 CCDC96Q2M329 555 aa21.03■□□□□ 0.96
SNX27-203ENST00000368843 CCDC97Q96F63 343 aaPredicted RBP21.03■□□□□ 0.96
SNX27-203ENST00000368843 TROQ12816 1431 aaPredicted RBP21.03■□□□□ 0.96
SNX27-203ENST00000368843 CFAP45Q9UL16 551 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 107 ms