RNA–Protein interactions for RNA: ENST00000366862.9

FBXO28-201, Transcript of F-box protein 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FBXO28, Length 5,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-201ENST00000366862 POLR3GO15318 223 aaPredicted RBP18.44■□□□□ 0.54
FBXO28-201ENST00000366862 ATP2B1P20020 1258 aa18.44■□□□□ 0.54
FBXO28-201ENST00000366862 MICALCLQ6ZW33 695 aa18.44■□□□□ 0.54
FBXO28-201ENST00000366862 CCDC94Q9BW85 323 aaPredicted RBP18.43■□□□□ 0.54
FBXO28-201ENST00000366862 DDX19AQ9NUU7 478 aaKnown RBP18.43■□□□□ 0.54
FBXO28-201ENST00000366862 TBC1D2BQ9UPU7 963 aa18.43■□□□□ 0.54
FBXO28-201ENST00000366862 KIF5CO60282 957 aa18.43■□□□□ 0.54
FBXO28-201ENST00000366862 PTPRGP23470 1445 aa18.43■□□□□ 0.54
FBXO28-201ENST00000366862 CDKL5O76039 1030 aa18.43■□□□□ 0.54
FBXO28-201ENST00000366862 VPS37DQ86XT2 251 aa18.43■□□□□ 0.54
FBXO28-201ENST00000366862 FGD5Q6ZNL6 1462 aa18.42■□□□□ 0.54
FBXO28-201ENST00000366862 CAVIN2O95810 425 aa18.42■□□□□ 0.54
FBXO28-201ENST00000366862 TRIM22Q8IYM9 498 aa18.42■□□□□ 0.54
FBXO28-201ENST00000366862 ZKSCAN5Q9Y2L8 839 aa18.42■□□□□ 0.54
FBXO28-201ENST00000366862 ALDH1L2Q3SY69 923 aa18.42■□□□□ 0.54
FBXO28-201ENST00000366862 LRRFIP2Q9Y608 721 aaKnown RBP18.42■□□□□ 0.54
FBXO28-201ENST00000366862 CASTP20810 708 aaKnown RBP18.42■□□□□ 0.54
FBXO28-201ENST00000366862 EFCAB5A4FU69 1503 aa18.41■□□□□ 0.54
FBXO28-201ENST00000366862 NCOA1Q15788 1441 aa18.41■□□□□ 0.54
FBXO28-201ENST00000366862 AIMP1Q12904 312 aaKnown RBP18.41■□□□□ 0.54
FBXO28-201ENST00000366862 NOLC1Q14978 699 aaKnown RBP eCLIP18.41■□□□□ 0.54
FBXO28-201ENST00000366862 FANCD2Q9BXW9 1451 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 CCDC171Q6TFL3 1326 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 CFAP70Q5T0N1 1121 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 SMAP1Q8IYB5 467 aaPredicted RBP18.4■□□□□ 0.54
FBXO28-201ENST00000366862 TRIM34Q9BYJ4 488 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 GOLGA6L9A6NEM1 432 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 CEP135Q66GS9 1140 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 TRERF1Q96PN7 1200 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 BMP2KLQ5H9B9 411 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 CDK5RAP3Q96JB5 506 aa18.4■□□□□ 0.54
FBXO28-201ENST00000366862 CWC27Q6UX04 472 aaKnown RBP18.39■□□□□ 0.54
FBXO28-201ENST00000366862 RBM33Q96EV2 1170 aaKnown RBP18.39■□□□□ 0.54
FBXO28-201ENST00000366862 KIAA1328Q86T90 577 aa18.39■□□□□ 0.53
FBXO28-201ENST00000366862 CCAR1Q8IX12 1150 aaKnown RBP18.39■□□□□ 0.53
FBXO28-201ENST00000366862 BBXQ8WY36 941 aaPredicted RBP18.39■□□□□ 0.53
FBXO28-201ENST00000366862 TOP1P11387 765 aaKnown RBP18.39■□□□□ 0.53
FBXO28-201ENST00000366862 CCDC43Q96MW1 224 aaKnown RBP18.39■□□□□ 0.53
FBXO28-201ENST00000366862 ANKRD30BQ9BXX2 1392 aa18.39■□□□□ 0.53
FBXO28-201ENST00000366862 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
FBXO28-201ENST00000366862 MAP4K4O95819 1239 aaPredicted RBP18.38■□□□□ 0.53
FBXO28-201ENST00000366862 GPRASP1Q5JY77 1395 aa18.38■□□□□ 0.53
FBXO28-201ENST00000366862 KDM4AO75164 1064 aa18.38■□□□□ 0.53
FBXO28-201ENST00000366862 KIF4BQ2VIQ3 1234 aa18.38■□□□□ 0.53
FBXO28-201ENST00000366862 PANK2Q9BZ23 570 aa18.38■□□□□ 0.53
FBXO28-201ENST00000366862 SNW1Q13573 536 aaKnown RBP18.38■□□□□ 0.53
FBXO28-201ENST00000366862 DUSP27Q5VZP5 1158 aa18.38■□□□□ 0.53
FBXO28-201ENST00000366862 NOL7Q9UMY1 257 aaKnown RBP18.38■□□□□ 0.53
FBXO28-201ENST00000366862 DYDC1Q8WWB3 177 aa18.37■□□□□ 0.53
FBXO28-201ENST00000366862 GAPVD1Q14C86 1478 aa18.37■□□□□ 0.53
FBXO28-201ENST00000366862 FCHSD2O94868 740 aa18.37■□□□□ 0.53
FBXO28-201ENST00000366862 UBE2HP62256 183 aa18.37■□□□□ 0.53
FBXO28-201ENST00000366862 ZFYVE27Q5T4F4 411 aa18.37■□□□□ 0.53
FBXO28-201ENST00000366862 ABCC11Q96J66 1382 aa18.37■□□□□ 0.53
FBXO28-201ENST00000366862 MX1P20591 662 aa18.37■□□□□ 0.53
FBXO28-201ENST00000366862 ENOX2Q16206 610 aaKnown RBP18.37■□□□□ 0.53
FBXO28-201ENST00000366862 IMMTQ16891 758 aaKnown RBP18.37■□□□□ 0.53
FBXO28-201ENST00000366862 ANKRD18AQ8IVF6 992 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.36■□□□□ 0.53
FBXO28-201ENST00000366862 TRMT1Q9NXH9 659 aaKnown RBP18.36■□□□□ 0.53
FBXO28-201ENST00000366862 LIMCH1Q9UPQ0 1083 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 SEPT7Q16181 437 aaKnown RBP18.36■□□□□ 0.53
FBXO28-201ENST00000366862 GPATCH11Q8N954 259 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 IVLP07476 585 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 SYCP1Q15431 976 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 SMARCC1Q92922 1105 aaPredicted RBP18.36■□□□□ 0.53
FBXO28-201ENST00000366862 CTNNA3Q9UI47 895 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 NEFHP12036 1026 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 TMPOP42166 694 aaKnown RBP18.36■□□□□ 0.53
FBXO28-201ENST00000366862 CCDC158Q5M9N0 1113 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 TAF4BQ92750 862 aa18.36■□□□□ 0.53
FBXO28-201ENST00000366862 FERMT3Q86UX7 667 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 SLC12A5Q9H2X9 1139 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 LMAN1P49257 510 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 TMEM132EQ6IEE7 984 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 TAX1BP1Q86VP1 789 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 RBM27Q9P2N5 1060 aaKnown RBP18.35■□□□□ 0.53
FBXO28-201ENST00000366862 NAIPQ13075 1403 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 STX1AQ16623 288 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 HDGFL1Q5TGJ6 251 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 CCDC150Q8NCX0 1101 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 SNX21Q969T3 373 aa18.35■□□□□ 0.53
FBXO28-201ENST00000366862 GTF2A1P52655 376 aaPredicted RBP18.35■□□□□ 0.53
FBXO28-201ENST00000366862 RAB11FIP3O75154 756 aa18.34■□□□□ 0.53
FBXO28-201ENST00000366862 WASF1Q92558 559 aa18.34■□□□□ 0.53
FBXO28-201ENST00000366862 RAD21O60216 631 aa18.34■□□□□ 0.53
FBXO28-201ENST00000366862 PRXQ9BXM0 1461 aa18.34■□□□□ 0.53
FBXO28-201ENST00000366862 TUBB4AP04350 444 aa18.33■□□□□ 0.53
FBXO28-201ENST00000366862 ZNF397Q8NF99 534 aaPredicted RBP18.33■□□□□ 0.53
FBXO28-201ENST00000366862 CEP131Q9UPN4 1083 aa18.33■□□□□ 0.53
FBXO28-201ENST00000366862 CCDC69A6NI79 296 aa18.33■□□□□ 0.53
FBXO28-201ENST00000366862 TBC1D9Q6ZT07 1266 aa18.33■□□□□ 0.53
FBXO28-201ENST00000366862 AACSQ86V21 672 aa18.33■□□□□ 0.53
FBXO28-201ENST00000366862 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
FBXO28-201ENST00000366862 SSH1Q8WYL5 1049 aa18.33■□□□□ 0.52
FBXO28-201ENST00000366862 SLC26A8Q96RN1 970 aa18.33■□□□□ 0.52
FBXO28-201ENST00000366862 SRGAP3O43295 1099 aa18.33■□□□□ 0.52
FBXO28-201ENST00000366862 C8orf34Q49A92 452 aa18.33■□□□□ 0.52
FBXO28-201ENST00000366862 EIF5P55010 431 aaKnown RBP18.32■□□□□ 0.52
FBXO28-201ENST00000366862 TTC39AQ5SRH9 613 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 238.8 ms