RNA–Protein interactions for RNA: ENST00000366813.1

H3F3A-201, Transcript of H3 histone family member 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene H3F3A, Length 1,308 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3A-201ENST00000366813 C6orf118Q5T5N4 469 aa13.15□□□□□ -0.3
H3F3A-201ENST00000366813 PTK2Q05397 1052 aa13.14□□□□□ -0.31
H3F3A-201ENST00000366813 IL27Q8NEV9 243 aa13.14□□□□□ -0.31
H3F3A-201ENST00000366813 EMILIN1Q9Y6C2 1016 aa13.14□□□□□ -0.31
H3F3A-201ENST00000366813 ASXL2Q76L83 1435 aa13.14□□□□□ -0.31
H3F3A-201ENST00000366813 BMP2P12643 396 aa13.13□□□□□ -0.31
H3F3A-201ENST00000366813 CCDC116Q8IYX3 515 aa13.13□□□□□ -0.31
H3F3A-201ENST00000366813 SLC10A4Q96EP9 437 aa13.13□□□□□ -0.31
H3F3A-201ENST00000366813 ZC3H4Q9UPT8 1303 aaKnown RBP13.13□□□□□ -0.31
H3F3A-201ENST00000366813 GLI2P10070 1586 aa13.12□□□□□ -0.31
H3F3A-201ENST00000366813 RFC5P40937 340 aa13.12□□□□□ -0.31
H3F3A-201ENST00000366813 CDV3Q9UKY7 258 aaKnown RBP13.12□□□□□ -0.31
H3F3A-201ENST00000366813 USP17L8P0C7I0 530 aa13.11□□□□□ -0.31
H3F3A-201ENST00000366813 INSM1Q01101 510 aaPredicted RBP13.11□□□□□ -0.31
H3F3A-201ENST00000366813 GOPCQ9HD26 462 aa13.11□□□□□ -0.31
H3F3A-201ENST00000366813 PLB1Q6P1J6 1458 aa13.1□□□□□ -0.31
H3F3A-201ENST00000366813 MAN1A2O60476 641 aa13.1□□□□□ -0.31
H3F3A-201ENST00000366813 VEGFBP49765 207 aa13.1□□□□□ -0.31
H3F3A-201ENST00000366813 NPAS3Q8IXF0 933 aa13.1□□□□□ -0.31
H3F3A-201ENST00000366813 KCTD15Q96SI1 283 aaPredicted RBP13.1□□□□□ -0.31
H3F3A-201ENST00000366813 RUSC2Q8N2Y8 1516 aa13.09□□□□□ -0.31
H3F3A-201ENST00000366813 WIPF1O43516 503 aa13.09□□□□□ -0.31
H3F3A-201ENST00000366813 LINC00528Q8N1L1 170 aa13.09□□□□□ -0.31
H3F3A-201ENST00000366813 EPS8L1Q8TE68 723 aa13.09□□□□□ -0.31
H3F3A-201ENST00000366813 PGPEP1Q9NXJ5 209 aa13.09□□□□□ -0.31
H3F3A-201ENST00000366813 GPSM3Q9Y4H4 160 aa13.09□□□□□ -0.31
H3F3A-201ENST00000366813 WRNQ14191 1432 aaPredicted RBP eCLIP13.08□□□□□ -0.32
H3F3A-201ENST00000366813 SOBPA7XYQ1 873 aa13.08□□□□□ -0.32
H3F3A-201ENST00000366813 IRF7Q92985 503 aa13.08□□□□□ -0.32
H3F3A-201ENST00000366813 PTPRGP23470 1445 aa13.07□□□□□ -0.32
H3F3A-201ENST00000366813 TMEM259Q4ZIN3 620 aa13.07□□□□□ -0.32
H3F3A-201ENST00000366813 PPP1R26Q5T8A7 1209 aaPredicted RBP13.07□□□□□ -0.32
H3F3A-201ENST00000366813 MEIOBQ8N635 442 aa13.07□□□□□ -0.32
H3F3A-201ENST00000366813 TSEN34Q9BSV6 310 aaKnown RBP13.07□□□□□ -0.32
H3F3A-201ENST00000366813 DHX9Q08211 1270 aaKnown RBP13.06□□□□□ -0.32
H3F3A-201ENST00000366813 ADAM32Q8TC27 787 aa13.06□□□□□ -0.32
H3F3A-201ENST00000366813 HMX1Q9NP08 348 aaPredicted RBP13.06□□□□□ -0.32
H3F3A-201ENST00000366813 ERICH3Q5RHP9 1530 aa13.06□□□□□ -0.32
H3F3A-201ENST00000366813 ABCC2Q92887 1545 aa13.06□□□□□ -0.32
H3F3A-201ENST00000366813 PTPRMP28827 1452 aa13.05□□□□□ -0.32
H3F3A-201ENST00000366813 TEX14Q8IWB6 1497 aa13.05□□□□□ -0.32
H3F3A-201ENST00000366813 HSPA2P54652 639 aa13.05□□□□□ -0.32
H3F3A-201ENST00000366813 SPATA31D1Q6ZQQ2 1576 aa13.05□□□□□ -0.32
H3F3A-201ENST00000366813 EPRSP07814 1512 aaKnown RBP13.03□□□□□ -0.32
H3F3A-201ENST00000366813 LCE2CQ5TA81 110 aa13.03□□□□□ -0.32
H3F3A-201ENST00000366813 H3BM21 787 aa13.02□□□□□ -0.33
H3F3A-201ENST00000366813 DZIP3Q86Y13 1208 aaKnown RBP13.02□□□□□ -0.33
H3F3A-201ENST00000366813 GTF3C3Q9Y5Q9 886 aa13.02□□□□□ -0.33
H3F3A-201ENST00000366813 PCF11O94913 1555 aaKnown RBP13.02□□□□□ -0.33
H3F3A-201ENST00000366813 MAP3K4Q9Y6R4 1608 aa13.02□□□□□ -0.33
H3F3A-201ENST00000366813 CBLBQ13191 982 aa13.01□□□□□ -0.33
H3F3A-201ENST00000366813 OCSTAMPQ9BR26 566 aa13.01□□□□□ -0.33
H3F3A-201ENST00000366813 KIF21BO75037 1637 aa13.01□□□□□ -0.33
H3F3A-201ENST00000366813 GMPRP36959 345 aa13□□□□□ -0.33
H3F3A-201ENST00000366813 NBPF20Q3BBV1 942 aa13□□□□□ -0.33
H3F3A-201ENST00000366813 RAB15P59190 212 aa12.99□□□□□ -0.33
H3F3A-201ENST00000366813 INTS6LQ5JSJ4 861 aaKnown RBP12.99□□□□□ -0.33
H3F3A-201ENST00000366813 STK17AQ9UEE5 414 aa12.99□□□□□ -0.33
H3F3A-201ENST00000366813 SOS2Q07890 1332 aaPredicted RBP12.98□□□□□ -0.33
H3F3A-201ENST00000366813 KIAA0586Q9BVV6 1533 aa12.98□□□□□ -0.33
H3F3A-201ENST00000366813 CUL7Q14999 1698 aa12.97□□□□□ -0.33
H3F3A-201ENST00000366813 TTLL8A6PVC2 850 aa12.96□□□□□ -0.33
H3F3A-201ENST00000366813 Q6ZVU0 165 aa12.96□□□□□ -0.33
H3F3A-201ENST00000366813 TNIKQ9UKE5 1360 aa12.95□□□□□ -0.34
H3F3A-201ENST00000366813 FIGNL2A6NMB9 653 aa12.94□□□□□ -0.34
H3F3A-201ENST00000366813 TRIM34Q9BYJ4 488 aa12.94□□□□□ -0.34
H3F3A-201ENST00000366813 DNMT3LQ9UJW3 386 aa12.94□□□□□ -0.34
H3F3A-201ENST00000366813 ERBB4Q15303 1308 aa12.94□□□□□ -0.34
H3F3A-201ENST00000366813 ADAMTSL3P82987 1691 aa12.94□□□□□ -0.34
H3F3A-201ENST00000366813 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.93□□□□□ -0.34
H3F3A-201ENST00000366813 RELBQ01201 579 aa12.92□□□□□ -0.34
H3F3A-201ENST00000366813 AGBL1Q96MI9 1066 aa12.92□□□□□ -0.34
H3F3A-201ENST00000366813 TMPRSS4Q9NRS4 437 aa12.92□□□□□ -0.34
H3F3A-201ENST00000366813 UHRF1BP1LA0JNW5 1464 aa12.92□□□□□ -0.34
H3F3A-201ENST00000366813 UACAQ9BZF9 1416 aa12.91□□□□□ -0.34
H3F3A-201ENST00000366813 PPFIA3O75145 1194 aa12.91□□□□□ -0.34
H3F3A-201ENST00000366813 FAM181BA6NEQ2 426 aa12.9□□□□□ -0.34
H3F3A-201ENST00000366813 ZBBXA8MT70 800 aa12.9□□□□□ -0.34
H3F3A-201ENST00000366813 SPINT1O43278 529 aa12.9□□□□□ -0.34
H3F3A-201ENST00000366813 TRIM52Q96A61 297 aa12.9□□□□□ -0.34
H3F3A-201ENST00000366813 CD109Q6YHK3 1445 aa12.89□□□□□ -0.35
H3F3A-201ENST00000366813 KDM5BQ9UGL1 1544 aa12.89□□□□□ -0.35
H3F3A-201ENST00000366813 ERVH48-1M5A8F1 160 aa12.88□□□□□ -0.35
H3F3A-201ENST00000366813 ZNF784Q8NCA9 323 aaPredicted RBP12.88□□□□□ -0.35
H3F3A-201ENST00000366813 PCDHB9Q9Y5E1 797 aa12.88□□□□□ -0.35
H3F3A-201ENST00000366813 ARID4BQ4LE39 1312 aaPredicted RBP12.88□□□□□ -0.35
H3F3A-201ENST00000366813 ZSCAN1Q8NBB4 408 aa12.88□□□□□ -0.35
H3F3A-201ENST00000366813 ZNF395Q9H8N7 513 aaPredicted RBP12.88□□□□□ -0.35
H3F3A-201ENST00000366813 CARMIL2Q6F5E8 1435 aa12.87□□□□□ -0.35
H3F3A-201ENST00000366813 GJD4Q96KN9 370 aaPredicted RBP12.87□□□□□ -0.35
H3F3A-201ENST00000366813 POLMQ9NP87 494 aaPredicted RBP12.87□□□□□ -0.35
H3F3A-201ENST00000366813 MAGI3Q5TCQ9 1506 aa12.86□□□□□ -0.35
H3F3A-201ENST00000366813 MADDQ8WXG6 1647 aa12.86□□□□□ -0.35
H3F3A-201ENST00000366813 PTSQ03393 145 aa12.86□□□□□ -0.35
H3F3A-201ENST00000366813 SEPT12Q8IYM1 358 aa12.86□□□□□ -0.35
H3F3A-201ENST00000366813 BANK1Q8NDB2 785 aa12.86□□□□□ -0.35
H3F3A-201ENST00000366813 INSM2Q96T92 566 aaPredicted RBP12.86□□□□□ -0.35
H3F3A-201ENST00000366813 ESPNB1AK53 854 aa12.85□□□□□ -0.35
H3F3A-201ENST00000366813 FBXO45P0C2W1 286 aa12.84□□□□□ -0.35
H3F3A-201ENST00000366813 VSIG8P0DPA2 414 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms