RNA–Protein interactions for RNA: ENST00000366695.3

HIST3H2A-201, Transcript of histone cluster 3 H2A, humanhuman

APPRIS P1 BASIC

Gene HIST3H2A, Length 895 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIST3H2A-201ENST00000366695 FAM98CQ17RN3 349 aaKnown RBP20.47■□□□□ 0.87
HIST3H2A-201ENST00000366695 POTEAQ6S8J7 498 aa20.47■□□□□ 0.87
HIST3H2A-201ENST00000366695 ADAMTS8Q9UP79 889 aa20.47■□□□□ 0.87
HIST3H2A-201ENST00000366695 PKD1L3Q7Z443 1732 aa20.45■□□□□ 0.86
HIST3H2A-201ENST00000366695 PRKAR2BP31323 418 aa20.44■□□□□ 0.86
HIST3H2A-201ENST00000366695 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.86
HIST3H2A-201ENST00000366695 LRRC37A3O60309 1634 aa20.44■□□□□ 0.86
HIST3H2A-201ENST00000366695 NEFMP07197 916 aa20.43■□□□□ 0.86
HIST3H2A-201ENST00000366695 AMOTQ4VCS5 1084 aa20.42■□□□□ 0.86
HIST3H2A-201ENST00000366695 FAM9BQ8IZU0 186 aa20.42■□□□□ 0.86
HIST3H2A-201ENST00000366695 PLEKHF1Q96S99 279 aa20.42■□□□□ 0.86
HIST3H2A-201ENST00000366695 TNS2Q63HR2 1409 aa20.42■□□□□ 0.86
HIST3H2A-201ENST00000366695 EXOC5O00471 708 aa20.41■□□□□ 0.86
HIST3H2A-201ENST00000366695 PLEKHO1Q53GL0 409 aaPredicted RBP20.41■□□□□ 0.86
HIST3H2A-201ENST00000366695 ZCRB1Q8TBF4 217 aaKnown RBP20.41■□□□□ 0.86
HIST3H2A-201ENST00000366695 SPG7Q9UQ90 795 aa20.41■□□□□ 0.86
HIST3H2A-201ENST00000366695 A0A0G2JS52 829 aa20.4■□□□□ 0.86
HIST3H2A-201ENST00000366695 MYT1Q01538 1121 aa20.4■□□□□ 0.86
HIST3H2A-201ENST00000366695 DDB1Q16531 1140 aa20.4■□□□□ 0.86
HIST3H2A-201ENST00000366695 SEPT12Q8IYM1 358 aa20.4■□□□□ 0.86
HIST3H2A-201ENST00000366695 RUNDC1Q96C34 613 aa20.4■□□□□ 0.86
HIST3H2A-201ENST00000366695 SHANK3Q9BYB0 1731 aa20.4■□□□□ 0.86
HIST3H2A-201ENST00000366695 MAPK8IP3Q9UPT6 1336 aa20.4■□□□□ 0.86
HIST3H2A-201ENST00000366695 PCDH11XQ9BZA7 1347 aa20.38■□□□□ 0.85
HIST3H2A-201ENST00000366695 PCDH11YQ9BZA8 1340 aa20.38■□□□□ 0.85
HIST3H2A-201ENST00000366695 RGS12O14924 1447 aa20.37■□□□□ 0.85
HIST3H2A-201ENST00000366695 CCDC146Q8IYE0 955 aa20.37■□□□□ 0.85
HIST3H2A-201ENST00000366695 GAS2L2Q8NHY3 880 aa20.37■□□□□ 0.85
HIST3H2A-201ENST00000366695 PHACTR3Q96KR7 559 aa20.37■□□□□ 0.85
HIST3H2A-201ENST00000366695 BRWD3Q6RI45 1802 aa20.37■□□□□ 0.85
HIST3H2A-201ENST00000366695 PDE3BQ13370 1112 aa20.35■□□□□ 0.85
HIST3H2A-201ENST00000366695 MTHFSDQ2M296 383 aaKnown RBP20.35■□□□□ 0.85
HIST3H2A-201ENST00000366695 ZNF530Q6P9A1 599 aaPredicted RBP20.34■□□□□ 0.85
HIST3H2A-201ENST00000366695 NFE2L2Q16236 605 aa20.33■□□□□ 0.85
HIST3H2A-201ENST00000366695 C1orf141Q5JVX7 400 aa20.33■□□□□ 0.85
HIST3H2A-201ENST00000366695 IFNL2Q8IZJ0 200 aa20.33■□□□□ 0.85
HIST3H2A-201ENST00000366695 CYP27B1O15528 508 aa20.32■□□□□ 0.84
HIST3H2A-201ENST00000366695 PHKG2P15735 406 aa20.32■□□□□ 0.84
HIST3H2A-201ENST00000366695 AKAP4Q5JQC9 854 aa20.32■□□□□ 0.84
HIST3H2A-201ENST00000366695 DDX54Q8TDD1 881 aaKnown RBP20.32■□□□□ 0.84
HIST3H2A-201ENST00000366695 DLG5Q8TDM6 1919 aa20.31■□□□□ 0.84
HIST3H2A-201ENST00000366695 HSP90AB1P08238 724 aaKnown RBP20.31■□□□□ 0.84
HIST3H2A-201ENST00000366695 KRT27Q7Z3Y8 459 aa20.31■□□□□ 0.84
HIST3H2A-201ENST00000366695 APAF1O14727 1248 aa20.3■□□□□ 0.84
HIST3H2A-201ENST00000366695 TMPOP42166 694 aaKnown RBP20.3■□□□□ 0.84
HIST3H2A-201ENST00000366695 NKX1-1Q15270 411 aaPredicted RBP20.3■□□□□ 0.84
HIST3H2A-201ENST00000366695 MARCH10Q8NA82 808 aaPredicted RBP20.3■□□□□ 0.84
HIST3H2A-201ENST00000366695 MAP3K5Q99683 1374 aa20.3■□□□□ 0.84
HIST3H2A-201ENST00000366695 NCBP3Q53F19 620 aaKnown RBP20.29■□□□□ 0.84
HIST3H2A-201ENST00000366695 BCL9O00512 1426 aa20.28■□□□□ 0.84
HIST3H2A-201ENST00000366695 GNAT3A8MTJ3 354 aa20.28■□□□□ 0.84
HIST3H2A-201ENST00000366695 HTATSF1O43719 755 aaKnown RBP20.28■□□□□ 0.84
HIST3H2A-201ENST00000366695 VIRMAQ69YN4 1812 aaKnown RBP20.27■□□□□ 0.84
HIST3H2A-201ENST00000366695 SCN11AQ9UI33 1791 aa20.27■□□□□ 0.84
HIST3H2A-201ENST00000366695 ADAMTS7Q9UKP4 1686 aa20.27■□□□□ 0.84
HIST3H2A-201ENST00000366695 RIPK4P57078 832 aa20.27■□□□□ 0.84
HIST3H2A-201ENST00000366695 LMOD3Q0VAK6 560 aa20.27■□□□□ 0.84
HIST3H2A-201ENST00000366695 NGEFQ8N5V2 710 aa20.27■□□□□ 0.84
HIST3H2A-201ENST00000366695 DCAF5Q96JK2 942 aa20.27■□□□□ 0.84
HIST3H2A-201ENST00000366695 RTF1Q92541 710 aaKnown RBP20.25■□□□□ 0.83
HIST3H2A-201ENST00000366695 FAM196AQ6ZSG2 479 aa20.24■□□□□ 0.83
HIST3H2A-201ENST00000366695 RRP7AQ9Y3A4 280 aaKnown RBP20.24■□□□□ 0.83
HIST3H2A-201ENST00000366695 KDM6AO15550 1401 aaPredicted RBP20.24■□□□□ 0.83
HIST3H2A-201ENST00000366695 NEUROD2Q15784 382 aa20.23■□□□□ 0.83
HIST3H2A-201ENST00000366695 CCDC27Q2M243 656 aa20.23■□□□□ 0.83
HIST3H2A-201ENST00000366695 MPRIPQ6WCQ1 1025 aa20.23■□□□□ 0.83
HIST3H2A-201ENST00000366695 DOT1LQ8TEK3 1739 aa20.23■□□□□ 0.83
HIST3H2A-201ENST00000366695 TOGARAM1Q9Y4F4 1720 aa20.23■□□□□ 0.83
HIST3H2A-201ENST00000366695 RNMTO43148 476 aaKnown RBP20.22■□□□□ 0.83
HIST3H2A-201ENST00000366695 SBF2Q86WG5 1849 aa20.22■□□□□ 0.83
HIST3H2A-201ENST00000366695 CEMIPQ8WUJ3 1361 aa20.21■□□□□ 0.83
HIST3H2A-201ENST00000366695 ERVV-2B6SEH9 535 aa20.21■□□□□ 0.83
HIST3H2A-201ENST00000366695 TRIM35Q9UPQ4 493 aa20.21■□□□□ 0.83
HIST3H2A-201ENST00000366695 MRC1P22897 1456 aa20.2■□□□□ 0.82
HIST3H2A-201ENST00000366695 FAM182BQ5T319 152 aa20.2■□□□□ 0.82
HIST3H2A-201ENST00000366695 IL17REQ8NFR9 667 aa20.2■□□□□ 0.82
HIST3H2A-201ENST00000366695 LGR6Q9HBX8 967 aa20.2■□□□□ 0.82
HIST3H2A-201ENST00000366695 ITGB4P16144 1822 aa20.2■□□□□ 0.82
HIST3H2A-201ENST00000366695 NHSQ6T4R5 1651 aa20.19■□□□□ 0.82
HIST3H2A-201ENST00000366695 MCM10Q7L590 875 aa20.18■□□□□ 0.82
HIST3H2A-201ENST00000366695 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
HIST3H2A-201ENST00000366695 SIPA1L3O60292 1781 aaPredicted RBP20.18■□□□□ 0.82
HIST3H2A-201ENST00000366695 DCTN1Q14203 1278 aa20.17■□□□□ 0.82
HIST3H2A-201ENST00000366695 SLC52A2Q9HAB3 445 aa20.17■□□□□ 0.82
HIST3H2A-201ENST00000366695 CABP4P57796 275 aa20.16■□□□□ 0.82
HIST3H2A-201ENST00000366695 CALD1Q05682 793 aaKnown RBP20.16■□□□□ 0.82
HIST3H2A-201ENST00000366695 TEFQ10587 303 aa20.16■□□□□ 0.82
HIST3H2A-201ENST00000366695 WWC1Q8IX03 1113 aa20.16■□□□□ 0.82
HIST3H2A-201ENST00000366695 PRIM1P49642 420 aaKnown RBP20.15■□□□□ 0.82
HIST3H2A-201ENST00000366695 HNRNPUQ00839 825 aaKnown RBP eCLIP20.15■□□□□ 0.82
HIST3H2A-201ENST00000366695 ACSBG1Q96GR2 724 aa20.15■□□□□ 0.82
HIST3H2A-201ENST00000366695 TMOD3Q9NYL9 352 aa20.15■□□□□ 0.82
HIST3H2A-201ENST00000366695 SENP3-EIF4A1A0A087X0R7 540 aa20.14■□□□□ 0.81
HIST3H2A-201ENST00000366695 THUMPD2Q9BTF0 503 aaKnown RBP20.14■□□□□ 0.81
HIST3H2A-201ENST00000366695 SALL2Q9Y467 1007 aaPredicted RBP20.14■□□□□ 0.81
HIST3H2A-201ENST00000366695 WDR63Q8IWG1 891 aa20.13■□□□□ 0.81
HIST3H2A-201ENST00000366695 NFATC2IPQ8NCF5 419 aa20.13■□□□□ 0.81
HIST3H2A-201ENST00000366695 SYTL4Q96C24 671 aaPredicted RBP20.13■□□□□ 0.81
HIST3H2A-201ENST00000366695 BCL11BQ9C0K0 894 aaPredicted RBP20.13■□□□□ 0.81
HIST3H2A-201ENST00000366695 ZNF521Q96K83 1311 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms