RNA–Protein interactions for RNA: ENST00000365490.1

RN7SKP249-201, Transcript of RNA, 7SK small nuclear pseudogene 249, humanhuman

BASIC

Gene RN7SKP249, Length 355 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP249-201ENST00000365490 IL2RBP14784 551 aa12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 TATP17735 454 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 PLEKHO1Q53GL0 409 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 GAS2L2Q8NHY3 880 aa12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 CDCA7Q9BWT1 371 aaPredicted RBP12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 PARP4Q9UKK3 1724 aaKnown RBP12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 ATRNO75882 1429 aa12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 ZBED9Q6R2W3 1325 aa12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 ZNF521Q96K83 1311 aa12.88□□□□□ -0.35
RN7SKP249-201ENST00000365490 TRIM35Q9UPQ4 493 aa12.87□□□□□ -0.35
RN7SKP249-201ENST00000365490 WNK3Q9BYP7 1800 aa12.87□□□□□ -0.35
RN7SKP249-201ENST00000365490 DLG5Q8TDM6 1919 aa12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 HTATSF1O43719 755 aaKnown RBP12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 ONECUT3O60422 494 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 RIPK4P57078 832 aa12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 WWC1Q8IX03 1113 aa12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 USP35Q9P2H5 1018 aa12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 TRPC5Q9UL62 973 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 SPG7Q9UQ90 795 aa12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 RRP7AQ9Y3A4 280 aaKnown RBP12.86□□□□□ -0.35
RN7SKP249-201ENST00000365490 ILDR1Q86SU0 546 aaPredicted RBP12.85□□□□□ -0.35
RN7SKP249-201ENST00000365490 GJD4Q96KN9 370 aaPredicted RBP12.85□□□□□ -0.35
RN7SKP249-201ENST00000365490 YTHDC1Q96MU7 727 aaKnown RBP12.85□□□□□ -0.35
RN7SKP249-201ENST00000365490 AKAP4Q5JQC9 854 aa12.84□□□□□ -0.35
RN7SKP249-201ENST00000365490 ZNF772Q68DY9 489 aaPredicted RBP12.84□□□□□ -0.35
RN7SKP249-201ENST00000365490 ZCRB1Q8TBF4 217 aaKnown RBP12.84□□□□□ -0.35
RN7SKP249-201ENST00000365490 QTRT2Q9H974 415 aaKnown RBP12.84□□□□□ -0.35
RN7SKP249-201ENST00000365490 GLI3P10071 1580 aa12.84□□□□□ -0.35
RN7SKP249-201ENST00000365490 SHANK3Q9BYB0 1731 aa12.84□□□□□ -0.35
RN7SKP249-201ENST00000365490 SENP3-EIF4A1A0A087X0R7 540 aa12.83□□□□□ -0.36
RN7SKP249-201ENST00000365490 GNAT3A8MTJ3 354 aa12.83□□□□□ -0.36
RN7SKP249-201ENST00000365490 LMOD3Q0VAK6 560 aa12.83□□□□□ -0.36
RN7SKP249-201ENST00000365490 NEUROD2Q15784 382 aa12.83□□□□□ -0.36
RN7SKP249-201ENST00000365490 WDR63Q8IWG1 891 aa12.83□□□□□ -0.36
RN7SKP249-201ENST00000365490 CCDC9Q9Y3X0 531 aaKnown RBP12.83□□□□□ -0.36
RN7SKP249-201ENST00000365490 ADAMTS7Q9UKP4 1686 aa12.83□□□□□ -0.36
RN7SKP249-201ENST00000365490 MAP3K5Q99683 1374 aa12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 CYP27B1O15528 508 aa12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 PHKG2P15735 406 aa12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 PDE3BQ13370 1112 aa12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 NKX1-1Q15270 411 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 ZNF530Q6P9A1 599 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 IFNL2Q8IZJ0 200 aa12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 RGS17Q9UGC6 210 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 SALL2Q9Y467 1007 aaPredicted RBP12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 THSD7AQ9UPZ6 1657 aa12.82□□□□□ -0.36
RN7SKP249-201ENST00000365490 EXOC5O00471 708 aa12.81□□□□□ -0.36
RN7SKP249-201ENST00000365490 IL17REQ8NFR9 667 aa12.81□□□□□ -0.36
RN7SKP249-201ENST00000365490 IL16Q14005 1332 aa12.81□□□□□ -0.36
RN7SKP249-201ENST00000365490 PCDH11XQ9BZA7 1347 aa12.81□□□□□ -0.36
RN7SKP249-201ENST00000365490 PCDH11YQ9BZA8 1340 aa12.81□□□□□ -0.36
RN7SKP249-201ENST00000365490 CEMIPQ8WUJ3 1361 aa12.81□□□□□ -0.36
RN7SKP249-201ENST00000365490 TNS2Q63HR2 1409 aa12.8□□□□□ -0.36
RN7SKP249-201ENST00000365490 FAM98CQ17RN3 349 aaKnown RBP12.8□□□□□ -0.36
RN7SKP249-201ENST00000365490 C1orf141Q5JVX7 400 aa12.8□□□□□ -0.36
RN7SKP249-201ENST00000365490 TRMT2AQ8IZ69 625 aaKnown RBP12.8□□□□□ -0.36
RN7SKP249-201ENST00000365490 LRRC37A3O60309 1634 aa12.8□□□□□ -0.36
RN7SKP249-201ENST00000365490 HSP90AB1P08238 724 aaKnown RBP12.79□□□□□ -0.36
RN7SKP249-201ENST00000365490 CALD1Q05682 793 aaKnown RBP12.79□□□□□ -0.36
RN7SKP249-201ENST00000365490 GOLGA2Q08379 1002 aa12.79□□□□□ -0.36
RN7SKP249-201ENST00000365490 DDB1Q16531 1140 aa12.79□□□□□ -0.36
RN7SKP249-201ENST00000365490 RTF1Q92541 710 aaKnown RBP12.79□□□□□ -0.36
RN7SKP249-201ENST00000365490 DCAF5Q96JK2 942 aa12.79□□□□□ -0.36
RN7SKP249-201ENST00000365490 RNMTO43148 476 aaKnown RBP12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 ZNF853P0CG23 659 aa12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 SLFN5Q08AF3 891 aa12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 DCTN1Q14203 1278 aa12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 MCM10Q7L590 875 aa12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 THUMPD2Q9BTF0 503 aaKnown RBP12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 LGR6Q9HBX8 967 aa12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 SCN11AQ9UI33 1791 aa12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 KDM6AO15550 1401 aaPredicted RBP12.78□□□□□ -0.36
RN7SKP249-201ENST00000365490 VIRMAQ69YN4 1812 aaKnown RBP12.77□□□□□ -0.37
RN7SKP249-201ENST00000365490 MPRIPQ6WCQ1 1025 aa12.77□□□□□ -0.37
RN7SKP249-201ENST00000365490 DDX54Q8TDD1 881 aaKnown RBP12.77□□□□□ -0.37
RN7SKP249-201ENST00000365490 CDCA7LQ96GN5 454 aa12.77□□□□□ -0.37
RN7SKP249-201ENST00000365490 SPINK5Q9NQ38 1064 aaPredicted RBP12.77□□□□□ -0.37
RN7SKP249-201ENST00000365490 E9PSI1 815 aa12.76□□□□□ -0.37
RN7SKP249-201ENST00000365490 CHL1O00533 1208 aa12.76□□□□□ -0.37
RN7SKP249-201ENST00000365490 MARCH10Q8NA82 808 aaPredicted RBP12.76□□□□□ -0.37
RN7SKP249-201ENST00000365490 CFAP44Q96MT7 982 aa12.76□□□□□ -0.37
RN7SKP249-201ENST00000365490 BABAM1Q9NWV8 329 aa12.76□□□□□ -0.37
RN7SKP249-201ENST00000365490 ERVV-2B6SEH9 535 aa12.75□□□□□ -0.37
RN7SKP249-201ENST00000365490 SIPA1L3O60292 1781 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP249-201ENST00000365490 MRC1P22897 1456 aa12.75□□□□□ -0.37
RN7SKP249-201ENST00000365490 SEPT12Q8IYM1 358 aa12.75□□□□□ -0.37
RN7SKP249-201ENST00000365490 IFT57Q9NWB7 429 aa12.75□□□□□ -0.37
RN7SKP249-201ENST00000365490 BCL9O00512 1426 aa12.74□□□□□ -0.37
RN7SKP249-201ENST00000365490 RXRBP28702 533 aa12.74□□□□□ -0.37
RN7SKP249-201ENST00000365490 GNAI1P63096 354 aa12.74□□□□□ -0.37
RN7SKP249-201ENST00000365490 TAF7Q15545 349 aaPredicted RBP12.74□□□□□ -0.37
RN7SKP249-201ENST00000365490 DUSP27Q5VZP5 1158 aa12.74□□□□□ -0.37
RN7SKP249-201ENST00000365490 POTEAQ6S8J7 498 aa12.74□□□□□ -0.37
RN7SKP249-201ENST00000365490 MYH16Q9H6N6 1097 aa12.73□□□□□ -0.37
RN7SKP249-201ENST00000365490 SLC52A2Q9HAB3 445 aa12.73□□□□□ -0.37
RN7SKP249-201ENST00000365490 TOGARAM1Q9Y4F4 1720 aa12.73□□□□□ -0.37
RN7SKP249-201ENST00000365490 FANCIQ9NVI1 1328 aa12.71□□□□□ -0.37
RN7SKP249-201ENST00000365490 TEFQ10587 303 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms