RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 KDF1Q8NAX2 398 aaPredicted RBP6.46□□□□□ -1.38
RNU6-238P-201ENST00000363313 NSFL1CQ9UNZ2 370 aaKnown RBP6.46□□□□□ -1.38
RNU6-238P-201ENST00000363313 ERVH48-1M5A8F1 160 aa6.45□□□□□ -1.38
RNU6-238P-201ENST00000363313 ADD1P35611 737 aaKnown RBP6.45□□□□□ -1.38
RNU6-238P-201ENST00000363313 PLA2G4EQ3MJ16 856 aa6.45□□□□□ -1.38
RNU6-238P-201ENST00000363313 POLR3EQ9NVU0 708 aa6.45□□□□□ -1.38
RNU6-238P-201ENST00000363313 DYRK1BQ9Y463 629 aa6.45□□□□□ -1.38
RNU6-238P-201ENST00000363313 NR6A1Q15406 480 aa6.44□□□□□ -1.38
RNU6-238P-201ENST00000363313 DZIP3Q86Y13 1208 aaKnown RBP6.44□□□□□ -1.38
RNU6-238P-201ENST00000363313 LRRN4Q8WUT4 740 aa6.44□□□□□ -1.38
RNU6-238P-201ENST00000363313 ZNF837Q96EG3 531 aaPredicted RBP6.44□□□□□ -1.38
RNU6-238P-201ENST00000363313 SPOCK3Q9BQ16 436 aa6.44□□□□□ -1.38
RNU6-238P-201ENST00000363313 TMPRSS4Q9NRS4 437 aa6.44□□□□□ -1.38
RNU6-238P-201ENST00000363313 IGF1RP08069 1367 aa6.44□□□□□ -1.38
RNU6-238P-201ENST00000363313 TRERF1Q96PN7 1200 aa6.43□□□□□ -1.38
RNU6-238P-201ENST00000363313 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.43□□□□□ -1.38
RNU6-238P-201ENST00000363313 CUEDC1Q9NWM3 386 aaPredicted RBP6.43□□□□□ -1.38
RNU6-238P-201ENST00000363313 SH3D19Q5HYK7 790 aa6.42□□□□□ -1.38
RNU6-238P-201ENST00000363313 XP32Q5T750 250 aa6.42□□□□□ -1.38
RNU6-238P-201ENST00000363313 NEDD1Q8NHV4 660 aa6.42□□□□□ -1.38
RNU6-238P-201ENST00000363313 CNTNAP5Q8WYK1 1306 aa6.42□□□□□ -1.38
RNU6-238P-201ENST00000363313 MCCD1P59942 119 aaPredicted RBP6.41□□□□□ -1.38
RNU6-238P-201ENST00000363313 DBN1Q16643 649 aa6.41□□□□□ -1.38
RNU6-238P-201ENST00000363313 ATP5J2-PTCD1G3V325 749 aa6.4□□□□□ -1.38
RNU6-238P-201ENST00000363313 PROCP04070 461 aa6.4□□□□□ -1.38
RNU6-238P-201ENST00000363313 MAP2K3P46734 347 aa6.4□□□□□ -1.38
RNU6-238P-201ENST00000363313 PRICKLE2Q7Z3G6 844 aa6.4□□□□□ -1.38
RNU6-238P-201ENST00000363313 ZNF592Q92610 1267 aa6.4□□□□□ -1.38
RNU6-238P-201ENST00000363313 CFHR5Q9BXR6 569 aa6.4□□□□□ -1.38
RNU6-238P-201ENST00000363313 SPATA31C2B4DYI2 1134 aa6.39□□□□□ -1.39
RNU6-238P-201ENST00000363313 OIP5O43482 229 aa6.39□□□□□ -1.39
RNU6-238P-201ENST00000363313 ITGB2P05107 769 aa6.39□□□□□ -1.39
RNU6-238P-201ENST00000363313 GALNT6Q8NCL4 622 aa6.39□□□□□ -1.39
RNU6-238P-201ENST00000363313 ACDQ96AP0 544 aa6.39□□□□□ -1.39
RNU6-238P-201ENST00000363313 MX2P20592 715 aa6.38□□□□□ -1.39
RNU6-238P-201ENST00000363313 RNF20Q5VTR2 975 aa6.38□□□□□ -1.39
RNU6-238P-201ENST00000363313 DDRGK1Q96HY6 314 aa6.38□□□□□ -1.39
RNU6-238P-201ENST00000363313 GRIP2Q9C0E4 1043 aa6.38□□□□□ -1.39
RNU6-238P-201ENST00000363313 K7ELQ4 463 aaPredicted RBP6.37□□□□□ -1.39
RNU6-238P-201ENST00000363313 PIK3R2O00459 728 aa6.37□□□□□ -1.39
RNU6-238P-201ENST00000363313 RIPOR1Q6ZS17 1223 aa6.37□□□□□ -1.39
RNU6-238P-201ENST00000363313 A0A1W2PRU2 124 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 AP1G2O75843 785 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 F11P03951 625 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 RHOQP17081 205 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 ERVK-9P63128 1117 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 CLN3Q13286 438 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 LBRQ14739 615 aaKnown RBP6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 GTPBP3Q969Y2 492 aaKnown RBP6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 NLRP3Q96P20 1036 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 SLC24A3Q9HC58 644 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 CYLDQ9NQC7 956 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 GDF2Q9UK05 429 aaPredicted RBP6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 MKL2Q9ULH7 1088 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 PHF24Q9UPV7 400 aa6.36□□□□□ -1.39
RNU6-238P-201ENST00000363313 RAB15P59190 212 aa6.35□□□□□ -1.39
RNU6-238P-201ENST00000363313 CC2D2BQ6DHV5 1058 aa6.35□□□□□ -1.39
RNU6-238P-201ENST00000363313 NBPF10Q6P3W6 841 aaKnown RBP6.35□□□□□ -1.39
RNU6-238P-201ENST00000363313 CYP2U1Q7Z449 544 aa6.35□□□□□ -1.39
RNU6-238P-201ENST00000363313 NBPF15Q8N660 670 aa6.35□□□□□ -1.39
RNU6-238P-201ENST00000363313 OXCT2Q9BYC2 517 aaPredicted RBP6.35□□□□□ -1.39
RNU6-238P-201ENST00000363313 GPR25O00155 361 aa6.34□□□□□ -1.39
RNU6-238P-201ENST00000363313 POU4F2Q12837 409 aa6.34□□□□□ -1.39
RNU6-238P-201ENST00000363313 SLC27A3Q5K4L6 730 aa6.34□□□□□ -1.39
RNU6-238P-201ENST00000363313 PROCA1Q8NCQ7 364 aaPredicted RBP6.34□□□□□ -1.39
RNU6-238P-201ENST00000363313 NUCKS1Q9H1E3 243 aaKnown RBP6.34□□□□□ -1.39
RNU6-238P-201ENST00000363313 ZBBXA8MT70 800 aa6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 MEN1O00255 615 aa6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 USP17L8P0C7I0 530 aa6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 BAG6P46379 1132 aa6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 TAS1R3Q7RTX0 852 aa6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 EPS8L1Q8TE68 723 aa6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 GAS2L1Q99501 681 aaPredicted RBP6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 TIMMDC1Q9NPL8 285 aa6.33□□□□□ -1.4
RNU6-238P-201ENST00000363313 GIGYF1O75420 1035 aaPredicted RBP6.32□□□□□ -1.4
RNU6-238P-201ENST00000363313 TMEM259Q4ZIN3 620 aa6.32□□□□□ -1.4
RNU6-238P-201ENST00000363313 FBXO31Q5XUX0 539 aaPredicted RBP6.32□□□□□ -1.4
RNU6-238P-201ENST00000363313 KRBA1A5PL33 1030 aa6.31□□□□□ -1.4
RNU6-238P-201ENST00000363313 WASLO00401 505 aaPredicted RBP6.31□□□□□ -1.4
RNU6-238P-201ENST00000363313 GOLGA6L1Q8N7Z2 621 aa6.31□□□□□ -1.4
RNU6-238P-201ENST00000363313 GOPCQ9HD26 462 aa6.31□□□□□ -1.4
RNU6-238P-201ENST00000363313 HMX1Q9NP08 348 aaPredicted RBP6.31□□□□□ -1.4
RNU6-238P-201ENST00000363313 TRAK2O60296 914 aa6.3□□□□□ -1.4
RNU6-238P-201ENST00000363313 GNRH1P01148 92 aa6.3□□□□□ -1.4
RNU6-238P-201ENST00000363313 KLRG1Q96E93 195 aa6.3□□□□□ -1.4
RNU6-238P-201ENST00000363313 ESF1Q9H501 851 aaKnown RBP6.3□□□□□ -1.4
RNU6-238P-201ENST00000363313 ZNF330Q9Y3S2 320 aaPredicted RBP6.3□□□□□ -1.4
RNU6-238P-201ENST00000363313 A0A1B0GTH6 734 aa6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 RFC5P40937 340 aa6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 SNRPNP63162 240 aaKnown RBP6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 EDARADDQ8WWZ3 215 aa6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 ESYT1Q9BSJ8 1104 aa6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 TRIM34Q9BYJ4 488 aa6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 KRTAP4-8Q9BYQ9 185 aa6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 ATP1B4Q9UN42 357 aaPredicted RBP6.29□□□□□ -1.4
RNU6-238P-201ENST00000363313 SOCS7O14512 581 aa6.28□□□□□ -1.4
RNU6-238P-201ENST00000363313 Q8N3U1 123 aa6.28□□□□□ -1.4
RNU6-238P-201ENST00000363313 ATXN7L1Q9ULK2 861 aaPredicted RBP6.28□□□□□ -1.4
RNU6-238P-201ENST00000363313 PCDHB9Q9Y5E1 797 aa6.28□□□□□ -1.4
RNU6-238P-201ENST00000363313 SHISA8B8ZZ34 492 aa6.27□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms