RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 PNNQ9H307 717 aaKnown RBP16.49■□□□□ 0.23
NIF3L1-201ENST00000359683 CCDC9Q9Y3X0 531 aaKnown RBP16.49■□□□□ 0.23
NIF3L1-201ENST00000359683 USP35Q9P2H5 1018 aa16.48■□□□□ 0.23
NIF3L1-201ENST00000359683 PRKAR2BP31323 418 aa16.48■□□□□ 0.23
NIF3L1-201ENST00000359683 BARGINQ6ZT62 677 aa16.48■□□□□ 0.23
NIF3L1-201ENST00000359683 CCDC125Q86Z20 511 aa16.48■□□□□ 0.23
NIF3L1-201ENST00000359683 SEPT12Q8IYM1 358 aa16.47■□□□□ 0.23
NIF3L1-201ENST00000359683 IL2RBP14784 551 aa16.46■□□□□ 0.23
NIF3L1-201ENST00000359683 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
NIF3L1-201ENST00000359683 PLEKHG2Q9H7P9 1386 aa16.46■□□□□ 0.23
NIF3L1-201ENST00000359683 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
NIF3L1-201ENST00000359683 RUNDC1Q96C34 613 aa16.45■□□□□ 0.22
NIF3L1-201ENST00000359683 CDCA7Q9BWT1 371 aaPredicted RBP16.45■□□□□ 0.22
NIF3L1-201ENST00000359683 DISP2A7MBM2 1401 aa16.45■□□□□ 0.22
NIF3L1-201ENST00000359683 ONECUT3O60422 494 aaPredicted RBP16.45■□□□□ 0.22
NIF3L1-201ENST00000359683 CCDC146Q8IYE0 955 aa16.45■□□□□ 0.22
NIF3L1-201ENST00000359683 PHACTR3Q96KR7 559 aa16.45■□□□□ 0.22
NIF3L1-201ENST00000359683 MEGF6O75095 1541 aa16.44■□□□□ 0.22
NIF3L1-201ENST00000359683 A0A0G2JS52 829 aa16.44■□□□□ 0.22
NIF3L1-201ENST00000359683 MYT1Q01538 1121 aa16.44■□□□□ 0.22
NIF3L1-201ENST00000359683 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.44■□□□□ 0.22
NIF3L1-201ENST00000359683 THSD7AQ9UPZ6 1657 aa16.43■□□□□ 0.22
NIF3L1-201ENST00000359683 NEFMP07197 916 aa16.42■□□□□ 0.22
NIF3L1-201ENST00000359683 FAM98CQ17RN3 349 aaKnown RBP16.42■□□□□ 0.22
NIF3L1-201ENST00000359683 AMOTQ4VCS5 1084 aa16.42■□□□□ 0.22
NIF3L1-201ENST00000359683 PLEKHO1Q53GL0 409 aaPredicted RBP16.42■□□□□ 0.22
NIF3L1-201ENST00000359683 OVOS2A0A0G2JMS6 1433 aa16.42■□□□□ 0.22
NIF3L1-201ENST00000359683 KRT27Q7Z3Y8 459 aa16.41■□□□□ 0.22
NIF3L1-201ENST00000359683 MAPK8IP3Q9UPT6 1336 aa16.41■□□□□ 0.22
NIF3L1-201ENST00000359683 MTHFSDQ2M296 383 aaKnown RBP16.41■□□□□ 0.22
NIF3L1-201ENST00000359683 ZCRB1Q8TBF4 217 aaKnown RBP16.41■□□□□ 0.22
NIF3L1-201ENST00000359683 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
NIF3L1-201ENST00000359683 APAF1O14727 1248 aa16.4■□□□□ 0.22
NIF3L1-201ENST00000359683 SF3B2Q13435 895 aaKnown RBP16.4■□□□□ 0.22
NIF3L1-201ENST00000359683 DEFB132Q7Z7B7 95 aa16.4■□□□□ 0.22
NIF3L1-201ENST00000359683 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
NIF3L1-201ENST00000359683 PARP4Q9UKK3 1724 aaKnown RBP16.39■□□□□ 0.22
NIF3L1-201ENST00000359683 EXOC5O00471 708 aa16.39■□□□□ 0.21
NIF3L1-201ENST00000359683 GAS2L2Q8NHY3 880 aa16.39■□□□□ 0.21
NIF3L1-201ENST00000359683 TNS1Q9HBL0 1735 aaKnown RBP16.38■□□□□ 0.21
NIF3L1-201ENST00000359683 TMPOP42166 694 aaKnown RBP16.38■□□□□ 0.21
NIF3L1-201ENST00000359683 NFE2L2Q16236 605 aa16.38■□□□□ 0.21
NIF3L1-201ENST00000359683 DDB1Q16531 1140 aa16.37■□□□□ 0.21
NIF3L1-201ENST00000359683 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
NIF3L1-201ENST00000359683 NCBP3Q53F19 620 aaKnown RBP16.37■□□□□ 0.21
NIF3L1-201ENST00000359683 CYP27B1O15528 508 aa16.36■□□□□ 0.21
NIF3L1-201ENST00000359683 ZNF530Q6P9A1 599 aaPredicted RBP16.36■□□□□ 0.21
NIF3L1-201ENST00000359683 RIPK4P57078 832 aa16.35■□□□□ 0.21
NIF3L1-201ENST00000359683 AKAP4Q5JQC9 854 aa16.35■□□□□ 0.21
NIF3L1-201ENST00000359683 IFNL2Q8IZJ0 200 aa16.35■□□□□ 0.21
NIF3L1-201ENST00000359683 TNS2Q63HR2 1409 aa16.35■□□□□ 0.21
NIF3L1-201ENST00000359683 PCDH11XQ9BZA7 1347 aa16.35■□□□□ 0.21
NIF3L1-201ENST00000359683 PCDH11YQ9BZA8 1340 aa16.35■□□□□ 0.21
NIF3L1-201ENST00000359683 PHKG2P15735 406 aa16.34■□□□□ 0.21
NIF3L1-201ENST00000359683 NGEFQ8N5V2 710 aa16.34■□□□□ 0.21
NIF3L1-201ENST00000359683 RRP7AQ9Y3A4 280 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-201ENST00000359683 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-201ENST00000359683 NKX1-1Q15270 411 aaPredicted RBP16.34■□□□□ 0.21
NIF3L1-201ENST00000359683 NEUROD2Q15784 382 aa16.34■□□□□ 0.21
NIF3L1-201ENST00000359683 DDX54Q8TDD1 881 aaKnown RBP16.34■□□□□ 0.21
NIF3L1-201ENST00000359683 LRRC37A3O60309 1634 aa16.33■□□□□ 0.21
NIF3L1-201ENST00000359683 SHANK3Q9BYB0 1731 aa16.33■□□□□ 0.2
NIF3L1-201ENST00000359683 GNAT3A8MTJ3 354 aa16.33■□□□□ 0.2
NIF3L1-201ENST00000359683 C1orf141Q5JVX7 400 aa16.33■□□□□ 0.2
NIF3L1-201ENST00000359683 TRIM35Q9UPQ4 493 aa16.33■□□□□ 0.2
NIF3L1-201ENST00000359683 LRP5O75197 1615 aa16.32■□□□□ 0.2
NIF3L1-201ENST00000359683 SENP3-EIF4A1A0A087X0R7 540 aa16.32■□□□□ 0.2
NIF3L1-201ENST00000359683 BAG6P46379 1132 aa16.32■□□□□ 0.2
NIF3L1-201ENST00000359683 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
NIF3L1-201ENST00000359683 MARCH10Q8NA82 808 aaPredicted RBP16.32■□□□□ 0.2
NIF3L1-201ENST00000359683 MAP3K5Q99683 1374 aa16.32■□□□□ 0.2
NIF3L1-201ENST00000359683 DLG5Q8TDM6 1919 aa16.31■□□□□ 0.2
NIF3L1-201ENST00000359683 HSP90AB1P08238 724 aaKnown RBP16.31■□□□□ 0.2
NIF3L1-201ENST00000359683 PDE3BQ13370 1112 aa16.31■□□□□ 0.2
NIF3L1-201ENST00000359683 FAM182BQ5T319 152 aa16.31■□□□□ 0.2
NIF3L1-201ENST00000359683 HNRNPUQ00839 825 aaKnown RBP eCLIP16.3■□□□□ 0.2
NIF3L1-201ENST00000359683 LMOD3Q0VAK6 560 aa16.3■□□□□ 0.2
NIF3L1-201ENST00000359683 IL17REQ8NFR9 667 aa16.3■□□□□ 0.2
NIF3L1-201ENST00000359683 SALL2Q9Y467 1007 aaPredicted RBP16.3■□□□□ 0.2
NIF3L1-201ENST00000359683 MPRIPQ6WCQ1 1025 aa16.29■□□□□ 0.2
NIF3L1-201ENST00000359683 WWC1Q8IX03 1113 aa16.29■□□□□ 0.2
NIF3L1-201ENST00000359683 RTF1Q92541 710 aaKnown RBP16.29■□□□□ 0.2
NIF3L1-201ENST00000359683 DCAF5Q96JK2 942 aa16.29■□□□□ 0.2
NIF3L1-201ENST00000359683 LGR6Q9HBX8 967 aa16.29■□□□□ 0.2
NIF3L1-201ENST00000359683 SRCAPQ6ZRS2 3230 aa16.29■□□□□ 0.2
NIF3L1-201ENST00000359683 RNMTO43148 476 aaKnown RBP16.28■□□□□ 0.2
NIF3L1-201ENST00000359683 CEMIPQ8WUJ3 1361 aa16.28■□□□□ 0.2
NIF3L1-201ENST00000359683 DCTN1Q14203 1278 aa16.27■□□□□ 0.2
NIF3L1-201ENST00000359683 MCM10Q7L590 875 aa16.27■□□□□ 0.2
NIF3L1-201ENST00000359683 ZNF521Q96K83 1311 aa16.27■□□□□ 0.2
NIF3L1-201ENST00000359683 KDM6AO15550 1401 aaPredicted RBP16.27■□□□□ 0.19
NIF3L1-201ENST00000359683 ADAMTS7Q9UKP4 1686 aa16.26■□□□□ 0.19
NIF3L1-201ENST00000359683 BCL9O00512 1426 aa16.26■□□□□ 0.19
NIF3L1-201ENST00000359683 EN1Q05925 392 aaPredicted RBP16.26■□□□□ 0.19
NIF3L1-201ENST00000359683 WDR63Q8IWG1 891 aa16.26■□□□□ 0.19
NIF3L1-201ENST00000359683 RREB1Q92766 1687 aa16.25■□□□□ 0.19
NIF3L1-201ENST00000359683 PSDA5PKW4 1024 aaPredicted RBP16.25■□□□□ 0.19
NIF3L1-201ENST00000359683 ERVV-2B6SEH9 535 aa16.25■□□□□ 0.19
NIF3L1-201ENST00000359683 THUMPD2Q9BTF0 503 aaKnown RBP16.25■□□□□ 0.19
NIF3L1-201ENST00000359683 SCN11AQ9UI33 1791 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms