RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 CHRNA2Q15822 529 aa17.51■□□□□ 0.39
CCDC197-201ENST00000359253 EYA1Q99502 592 aa17.51■□□□□ 0.39
CCDC197-201ENST00000359253 ABCC6O95255 1503 aa17.51■□□□□ 0.39
CCDC197-201ENST00000359253 ATRNO75882 1429 aa17.5■□□□□ 0.39
CCDC197-201ENST00000359253 HTATSF1O43719 755 aaKnown RBP17.5■□□□□ 0.39
CCDC197-201ENST00000359253 ONECUT3O60422 494 aaPredicted RBP17.5■□□□□ 0.39
CCDC197-201ENST00000359253 GAS2L2Q8NHY3 880 aa17.5■□□□□ 0.39
CCDC197-201ENST00000359253 NWD2Q9ULI1 1742 aa17.5■□□□□ 0.39
CCDC197-201ENST00000359253 GNAI1P63096 354 aa17.49■□□□□ 0.39
CCDC197-201ENST00000359253 ZNF428Q96B54 188 aa17.49■□□□□ 0.39
CCDC197-201ENST00000359253 IFT57Q9NWB7 429 aa17.48■□□□□ 0.39
CCDC197-201ENST00000359253 AEBP1Q8IUX7 1158 aa17.47■□□□□ 0.39
CCDC197-201ENST00000359253 AXIN2Q9Y2T1 843 aa17.47■□□□□ 0.39
CCDC197-201ENST00000359253 THRAP3Q9Y2W1 955 aaKnown RBP17.46■□□□□ 0.39
CCDC197-201ENST00000359253 SPATA31A5Q5VU36 1347 aa17.46■□□□□ 0.38
CCDC197-201ENST00000359253 SPATA31A7Q8IWB4 1347 aa17.46■□□□□ 0.38
CCDC197-201ENST00000359253 PLEKHG2Q9H7P9 1386 aa17.45■□□□□ 0.38
CCDC197-201ENST00000359253 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.45■□□□□ 0.38
CCDC197-201ENST00000359253 CAMTA1Q9Y6Y1 1673 aa17.45■□□□□ 0.38
CCDC197-201ENST00000359253 FANCIQ9NVI1 1328 aa17.45■□□□□ 0.38
CCDC197-201ENST00000359253 IRX6P78412 446 aaPredicted RBP17.44■□□□□ 0.38
CCDC197-201ENST00000359253 CFAP44Q96MT7 982 aa17.44■□□□□ 0.38
CCDC197-201ENST00000359253 CCDC9Q9Y3X0 531 aaKnown RBP17.44■□□□□ 0.38
CCDC197-201ENST00000359253 ZBTB7CA1YPR0 619 aa17.43■□□□□ 0.38
CCDC197-201ENST00000359253 ZNF853P0CG23 659 aa17.43■□□□□ 0.38
CCDC197-201ENST00000359253 ILDR2Q71H61 639 aa17.43■□□□□ 0.38
CCDC197-201ENST00000359253 RTF1Q92541 710 aaKnown RBP17.43■□□□□ 0.38
CCDC197-201ENST00000359253 STRN4Q9NRL3 753 aa17.43■□□□□ 0.38
CCDC197-201ENST00000359253 NCAPD2Q15021 1401 aa17.43■□□□□ 0.38
CCDC197-201ENST00000359253 SPATA31A1Q5TZJ5 1347 aa17.43■□□□□ 0.38
CCDC197-201ENST00000359253 WDR17Q8IZU2 1322 aa17.43■□□□□ 0.38
CCDC197-201ENST00000359253 BARGINQ6ZT62 677 aa17.42■□□□□ 0.38
CCDC197-201ENST00000359253 LMO7Q8WWI1 1683 aa17.42■□□□□ 0.38
CCDC197-201ENST00000359253 COL18A1P39060 1754 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 MS4A1P11836 297 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 RARSP54136 660 aaKnown RBP17.41■□□□□ 0.38
CCDC197-201ENST00000359253 PDE3AQ14432 1141 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 AMOTQ4VCS5 1084 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 LARP1Q6PKG0 1096 aaKnown RBP17.41■□□□□ 0.38
CCDC197-201ENST00000359253 ANKRD24Q8TF21 1146 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 CARD10Q9BWT7 1032 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 PLCH1Q4KWH8 1693 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 DLG5Q8TDM6 1919 aa17.41■□□□□ 0.38
CCDC197-201ENST00000359253 COL5A2P05997 1499 aaPredicted RBP17.4■□□□□ 0.38
CCDC197-201ENST00000359253 MTHFSDQ2M296 383 aaKnown RBP17.4■□□□□ 0.38
CCDC197-201ENST00000359253 LTV1Q96GA3 475 aaPredicted RBP17.4■□□□□ 0.38
CCDC197-201ENST00000359253 BABAM1Q9NWV8 329 aa17.4■□□□□ 0.38
CCDC197-201ENST00000359253 CSB-PGBD3P0DP91 1061 aa17.39■□□□□ 0.37
CCDC197-201ENST00000359253 AAMPQ13685 434 aa17.39■□□□□ 0.37
CCDC197-201ENST00000359253 ALDH1L2Q3SY69 923 aa17.39■□□□□ 0.37
CCDC197-201ENST00000359253 NBPF6Q5VWK0 638 aa17.39■□□□□ 0.37
CCDC197-201ENST00000359253 TOM1L2Q6ZVM7 507 aa17.39■□□□□ 0.37
CCDC197-201ENST00000359253 NBPF4Q96M43 638 aa17.39■□□□□ 0.37
CCDC197-201ENST00000359253 CDCA7Q9BWT1 371 aaPredicted RBP17.39■□□□□ 0.37
CCDC197-201ENST00000359253 ERBB3P21860 1342 aa17.39■□□□□ 0.37
CCDC197-201ENST00000359253 CRB1P82279 1406 aa17.38■□□□□ 0.37
CCDC197-201ENST00000359253 GNAT3A8MTJ3 354 aa17.38■□□□□ 0.37
CCDC197-201ENST00000359253 EXOSC9Q06265 439 aaKnown RBP17.38■□□□□ 0.37
CCDC197-201ENST00000359253 PLEKHO1Q53GL0 409 aaPredicted RBP17.38■□□□□ 0.37
CCDC197-201ENST00000359253 FAM208AQ9UK61 1670 aaKnown RBP17.37■□□□□ 0.37
CCDC197-201ENST00000359253 BRPF1P55201 1214 aaPredicted RBP17.37■□□□□ 0.37
CCDC197-201ENST00000359253 TSR2Q969E8 191 aaKnown RBP17.37■□□□□ 0.37
CCDC197-201ENST00000359253 NRAPQ86VF7 1730 aa17.37■□□□□ 0.37
CCDC197-201ENST00000359253 CHL1O00533 1208 aa17.36■□□□□ 0.37
CCDC197-201ENST00000359253 SEPT12Q8IYM1 358 aa17.36■□□□□ 0.37
CCDC197-201ENST00000359253 BCAR3O75815 825 aa17.35■□□□□ 0.37
CCDC197-201ENST00000359253 FAM98CQ17RN3 349 aaKnown RBP17.35■□□□□ 0.37
CCDC197-201ENST00000359253 LAS1LQ9Y4W2 734 aaKnown RBP17.35■□□□□ 0.37
CCDC197-201ENST00000359253 MAP3K5Q99683 1374 aa17.35■□□□□ 0.37
CCDC197-201ENST00000359253 PLIN1O60240 522 aa17.34■□□□□ 0.37
CCDC197-201ENST00000359253 CANXP27824 592 aaKnown RBP17.34■□□□□ 0.37
CCDC197-201ENST00000359253 SOS1Q07889 1333 aaPredicted RBP17.34■□□□□ 0.37
CCDC197-201ENST00000359253 MBIPQ9NS73 344 aa17.34■□□□□ 0.37
CCDC197-201ENST00000359253 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.34■□□□□ 0.37
CCDC197-201ENST00000359253 GLI3P10071 1580 aa17.33■□□□□ 0.37
CCDC197-201ENST00000359253 IPO8O15397 1037 aaKnown RBP17.33■□□□□ 0.36
CCDC197-201ENST00000359253 CCDC136Q96JN2 1154 aa17.33■□□□□ 0.36
CCDC197-201ENST00000359253 NLRP2Q9NX02 1062 aa17.33■□□□□ 0.36
CCDC197-201ENST00000359253 USP35Q9P2H5 1018 aa17.33■□□□□ 0.36
CCDC197-201ENST00000359253 KIF16BQ96L93 1317 aa17.32■□□□□ 0.36
CCDC197-201ENST00000359253 AKAP4Q5JQC9 854 aa17.32■□□□□ 0.36
CCDC197-201ENST00000359253 EXOC6Q8TAG9 804 aa17.32■□□□□ 0.36
CCDC197-201ENST00000359253 THUMPD2Q9BTF0 503 aaKnown RBP17.32■□□□□ 0.36
CCDC197-201ENST00000359253 VAMP4O75379 141 aa17.31■□□□□ 0.36
CCDC197-201ENST00000359253 ZKSCAN2Q63HK3 967 aa17.31■□□□□ 0.36
CCDC197-201ENST00000359253 MCM10Q7L590 875 aa17.31■□□□□ 0.36
CCDC197-201ENST00000359253 CHMP4AQ9BY43 222 aa17.31■□□□□ 0.36
CCDC197-201ENST00000359253 OVOS2A0A0G2JMS6 1433 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 RGS12O14924 1447 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 SOCS7O14512 581 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 DCTN1Q14203 1278 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 KRT27Q7Z3Y8 459 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 USHBP1Q8N6Y0 703 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 RAPGEF4Q8WZA2 1011 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 CRBNQ96SW2 442 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 SMC4Q9NTJ3 1288 aa17.3■□□□□ 0.36
CCDC197-201ENST00000359253 EXOC5O00471 708 aa17.29■□□□□ 0.36
CCDC197-201ENST00000359253 TATP17735 454 aaPredicted RBP17.29■□□□□ 0.36
CCDC197-201ENST00000359253 TAF7Q15545 349 aaPredicted RBP17.29■□□□□ 0.36
CCDC197-201ENST00000359253 TWISTNBQ3B726 338 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms