RNA–Protein interactions for RNA: ENST00000357943.9

CCNE1-202, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-202ENST00000357943 OVOS2A0A0G2JMS6 1433 aa19.76■□□□□ 0.75
CCNE1-202ENST00000357943 A0A0G2JS52 829 aa19.76■□□□□ 0.75
CCNE1-202ENST00000357943 MYT1Q01538 1121 aa19.76■□□□□ 0.75
CCNE1-202ENST00000357943 PHACTR3Q96KR7 559 aa19.76■□□□□ 0.75
CCNE1-202ENST00000357943 CDCA7Q9BWT1 371 aaPredicted RBP19.76■□□□□ 0.75
CCNE1-202ENST00000357943 SEPT12Q8IYM1 358 aa19.74■□□□□ 0.75
CCNE1-202ENST00000357943 WNK3Q9BYP7 1800 aa19.73■□□□□ 0.75
CCNE1-202ENST00000357943 THSD7AQ9UPZ6 1657 aa19.73■□□□□ 0.75
CCNE1-202ENST00000357943 DDB1Q16531 1140 aa19.73■□□□□ 0.75
CCNE1-202ENST00000357943 ZCRB1Q8TBF4 217 aaKnown RBP19.73■□□□□ 0.75
CCNE1-202ENST00000357943 PNNQ9H307 717 aaKnown RBP19.73■□□□□ 0.75
CCNE1-202ENST00000357943 EP400Q96L91 3159 aa19.72■□□□□ 0.75
CCNE1-202ENST00000357943 PARP4Q9UKK3 1724 aaKnown RBP19.72■□□□□ 0.75
CCNE1-202ENST00000357943 EXOC5O00471 708 aa19.72■□□□□ 0.75
CCNE1-202ENST00000357943 MTHFSDQ2M296 383 aaKnown RBP19.72■□□□□ 0.75
CCNE1-202ENST00000357943 AMOTQ4VCS5 1084 aa19.71■□□□□ 0.75
CCNE1-202ENST00000357943 PLEKHO1Q53GL0 409 aaPredicted RBP19.71■□□□□ 0.75
CCNE1-202ENST00000357943 RUNDC1Q96C34 613 aa19.71■□□□□ 0.75
CCNE1-202ENST00000357943 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.71■□□□□ 0.75
CCNE1-202ENST00000357943 TNS2Q63HR2 1409 aa19.71■□□□□ 0.75
CCNE1-202ENST00000357943 PLEKHG2Q9H7P9 1386 aa19.7■□□□□ 0.74
CCNE1-202ENST00000357943 SPG7Q9UQ90 795 aa19.7■□□□□ 0.74
CCNE1-202ENST00000357943 LRRC37A3O60309 1634 aa19.7■□□□□ 0.74
CCNE1-202ENST00000357943 RGS12O14924 1447 aa19.7■□□□□ 0.74
CCNE1-202ENST00000357943 MAPK8IP3Q9UPT6 1336 aa19.7■□□□□ 0.74
CCNE1-202ENST00000357943 NEFMP07197 916 aa19.69■□□□□ 0.74
CCNE1-202ENST00000357943 DDX54Q8TDD1 881 aaKnown RBP19.69■□□□□ 0.74
CCNE1-202ENST00000357943 CYP27B1O15528 508 aa19.69■□□□□ 0.74
CCNE1-202ENST00000357943 SENP3-EIF4A1A0A087X0R7 540 aa19.68■□□□□ 0.74
CCNE1-202ENST00000357943 ZNF530Q6P9A1 599 aaPredicted RBP19.68■□□□□ 0.74
CCNE1-202ENST00000357943 PKD1L3Q7Z443 1732 aa19.68■□□□□ 0.74
CCNE1-202ENST00000357943 PCDH11XQ9BZA7 1347 aa19.67■□□□□ 0.74
CCNE1-202ENST00000357943 PCDH11YQ9BZA8 1340 aa19.67■□□□□ 0.74
CCNE1-202ENST00000357943 APAF1O14727 1248 aa19.66■□□□□ 0.74
CCNE1-202ENST00000357943 PDE3BQ13370 1112 aa19.66■□□□□ 0.74
CCNE1-202ENST00000357943 MARCH10Q8NA82 808 aaPredicted RBP19.66■□□□□ 0.74
CCNE1-202ENST00000357943 GAS2L2Q8NHY3 880 aa19.66■□□□□ 0.74
CCNE1-202ENST00000357943 SHANK3Q9BYB0 1731 aa19.66■□□□□ 0.74
CCNE1-202ENST00000357943 PHKG2P15735 406 aa19.65■□□□□ 0.74
CCNE1-202ENST00000357943 RRP7AQ9Y3A4 280 aaKnown RBP19.65■□□□□ 0.74
CCNE1-202ENST00000357943 NFE2L2Q16236 605 aa19.65■□□□□ 0.74
CCNE1-202ENST00000357943 FAM182BQ5T319 152 aa19.65■□□□□ 0.74
CCNE1-202ENST00000357943 IFNL2Q8IZJ0 200 aa19.65■□□□□ 0.74
CCNE1-202ENST00000357943 TMPOP42166 694 aaKnown RBP19.64■□□□□ 0.73
CCNE1-202ENST00000357943 NEUROD2Q15784 382 aa19.64■□□□□ 0.73
CCNE1-202ENST00000357943 AKAP4Q5JQC9 854 aa19.63■□□□□ 0.73
CCNE1-202ENST00000357943 C1orf141Q5JVX7 400 aa19.63■□□□□ 0.73
CCNE1-202ENST00000357943 KRT27Q7Z3Y8 459 aa19.63■□□□□ 0.73
CCNE1-202ENST00000357943 RIPK4P57078 832 aa19.62■□□□□ 0.73
CCNE1-202ENST00000357943 BRWD3Q6RI45 1802 aa19.61■□□□□ 0.73
CCNE1-202ENST00000357943 GNAT3A8MTJ3 354 aa19.61■□□□□ 0.73
CCNE1-202ENST00000357943 MPRIPQ6WCQ1 1025 aa19.61■□□□□ 0.73
CCNE1-202ENST00000357943 MAP3K5Q99683 1374 aa19.61■□□□□ 0.73
CCNE1-202ENST00000357943 NKX1-1Q15270 411 aaPredicted RBP19.6■□□□□ 0.73
CCNE1-202ENST00000357943 SALL2Q9Y467 1007 aaPredicted RBP19.6■□□□□ 0.73
CCNE1-202ENST00000357943 DCTN1Q14203 1278 aa19.58■□□□□ 0.73
CCNE1-202ENST00000357943 LGR6Q9HBX8 967 aa19.58■□□□□ 0.73
CCNE1-202ENST00000357943 KDM6AO15550 1401 aaPredicted RBP19.58■□□□□ 0.72
CCNE1-202ENST00000357943 IL17REQ8NFR9 667 aa19.58■□□□□ 0.72
CCNE1-202ENST00000357943 DCAF5Q96JK2 942 aa19.58■□□□□ 0.72
CCNE1-202ENST00000357943 TRIM35Q9UPQ4 493 aa19.58■□□□□ 0.72
CCNE1-202ENST00000357943 HSP90AB1P08238 724 aaKnown RBP19.57■□□□□ 0.72
CCNE1-202ENST00000357943 MCM10Q7L590 875 aa19.57■□□□□ 0.72
CCNE1-202ENST00000357943 RTF1Q92541 710 aaKnown RBP19.57■□□□□ 0.72
CCNE1-202ENST00000357943 RNMTO43148 476 aaKnown RBP19.56■□□□□ 0.72
CCNE1-202ENST00000357943 HTATSF1O43719 755 aaKnown RBP19.55■□□□□ 0.72
CCNE1-202ENST00000357943 ACSBG1Q96GR2 724 aa19.55■□□□□ 0.72
CCNE1-202ENST00000357943 DLG5Q8TDM6 1919 aa19.55■□□□□ 0.72
CCNE1-202ENST00000357943 THUMPD2Q9BTF0 503 aaKnown RBP19.54■□□□□ 0.72
CCNE1-202ENST00000357943 BCL9O00512 1426 aa19.54■□□□□ 0.72
CCNE1-202ENST00000357943 CEMIPQ8WUJ3 1361 aa19.53■□□□□ 0.72
CCNE1-202ENST00000357943 HNRNPUQ00839 825 aaKnown RBP eCLIP19.53■□□□□ 0.72
CCNE1-202ENST00000357943 LMOD3Q0VAK6 560 aa19.53■□□□□ 0.72
CCNE1-202ENST00000357943 FAM196AQ6ZSG2 479 aa19.53■□□□□ 0.72
CCNE1-202ENST00000357943 KCNQ2O43526 872 aa19.52■□□□□ 0.72
CCNE1-202ENST00000357943 CCDC27Q2M243 656 aa19.52■□□□□ 0.72
CCNE1-202ENST00000357943 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
CCNE1-202ENST00000357943 TOGARAM1Q9Y4F4 1720 aa19.51■□□□□ 0.71
CCNE1-202ENST00000357943 PRIM1P49642 420 aaKnown RBP19.51■□□□□ 0.71
CCNE1-202ENST00000357943 NCBP3Q53F19 620 aaKnown RBP19.51■□□□□ 0.71
CCNE1-202ENST00000357943 SYTL4Q96C24 671 aaPredicted RBP19.51■□□□□ 0.71
CCNE1-202ENST00000357943 ADAMTS7Q9UKP4 1686 aa19.51■□□□□ 0.71
CCNE1-202ENST00000357943 ERVV-2B6SEH9 535 aa19.51■□□□□ 0.71
CCNE1-202ENST00000357943 PTF1AQ7RTS3 328 aa19.5■□□□□ 0.71
CCNE1-202ENST00000357943 NFATC2IPQ8NCF5 419 aa19.5■□□□□ 0.71
CCNE1-202ENST00000357943 SLC52A2Q9HAB3 445 aa19.5■□□□□ 0.71
CCNE1-202ENST00000357943 DOT1LQ8TEK3 1739 aa19.49■□□□□ 0.71
CCNE1-202ENST00000357943 CABP4P57796 275 aa19.49■□□□□ 0.71
CCNE1-202ENST00000357943 ILDR2Q71H61 639 aa19.49■□□□□ 0.71
CCNE1-202ENST00000357943 NGEFQ8N5V2 710 aa19.49■□□□□ 0.71
CCNE1-202ENST00000357943 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
CCNE1-202ENST00000357943 TEFQ10587 303 aa19.48■□□□□ 0.71
CCNE1-202ENST00000357943 PIGBQ92521 554 aa19.47■□□□□ 0.71
CCNE1-202ENST00000357943 TMOD3Q9NYL9 352 aa19.47■□□□□ 0.71
CCNE1-202ENST00000357943 MRC1P22897 1456 aa19.47■□□□□ 0.71
CCNE1-202ENST00000357943 ZNF521Q96K83 1311 aa19.47■□□□□ 0.71
CCNE1-202ENST00000357943 TRIM37O94972 964 aa19.47■□□□□ 0.71
CCNE1-202ENST00000357943 YTHDC1Q96MU7 727 aaKnown RBP19.47■□□□□ 0.71
CCNE1-202ENST00000357943 VIRMAQ69YN4 1812 aaKnown RBP19.45■□□□□ 0.7
CCNE1-202ENST00000357943 MIS18AQ9NYP9 233 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms