RNA–Protein interactions for RNA: ENST00000357881.8

RFX4-202, Transcript of regulatory factor X4, humanhuman

TSL 1 (best) BASIC

Gene RFX4, Length 2,565 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-202ENST00000357881 CT47A1Q5JQC4 288 aaPredicted RBP10.89□□□□□ -0.67
RFX4-202ENST00000357881 SATB1Q01826 763 aa10.88□□□□□ -0.67
RFX4-202ENST00000357881 THSD7AQ9UPZ6 1657 aa10.88□□□□□ -0.67
RFX4-202ENST00000357881 NUP188Q5SRE5 1749 aa10.88□□□□□ -0.67
RFX4-202ENST00000357881 OFD1O75665 1012 aa10.88□□□□□ -0.67
RFX4-202ENST00000357881 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.88□□□□□ -0.67
RFX4-202ENST00000357881 VPS8Q8N3P4 1428 aa10.88□□□□□ -0.67
RFX4-202ENST00000357881 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
RFX4-202ENST00000357881 COL14A1Q05707 1796 aaKnown RBP10.86□□□□□ -0.67
RFX4-202ENST00000357881 NBPF9Q3BBW0 867 aa10.86□□□□□ -0.67
RFX4-202ENST00000357881 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.86□□□□□ -0.67
RFX4-202ENST00000357881 SIRT1Q96EB6 747 aa10.86□□□□□ -0.67
RFX4-202ENST00000357881 RRBP1Q9P2E9 1410 aaKnown RBP10.86□□□□□ -0.67
RFX4-202ENST00000357881 CEP83Q9Y592 693 aa10.86□□□□□ -0.67
RFX4-202ENST00000357881 FSD2A1L4K1 749 aa10.85□□□□□ -0.67
RFX4-202ENST00000357881 CAPN2P17655 700 aa10.85□□□□□ -0.67
RFX4-202ENST00000357881 CCDC27Q2M243 656 aa10.85□□□□□ -0.67
RFX4-202ENST00000357881 SPRYD3Q8NCJ5 442 aa10.85□□□□□ -0.67
RFX4-202ENST00000357881 CCDC144AA2RUR9 1427 aa10.85□□□□□ -0.67
RFX4-202ENST00000357881 DYNC1I1O14576 645 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 PDE4AP27815 886 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 SLC4A3P48751 1232 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 CBX1P83916 185 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 KRT27Q7Z3Y8 459 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 ZBTB12Q9Y330 459 aaPredicted RBP10.84□□□□□ -0.67
RFX4-202ENST00000357881 UQCRHLA0A096LP55 91 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 ADAMTS2O95450 1211 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 UQCRHP07919 91 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 TMTC2Q8N394 836 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 OTUD6BQ8N6M0 293 aa10.84□□□□□ -0.67
RFX4-202ENST00000357881 BACH2Q9BYV9 841 aa10.83□□□□□ -0.68
RFX4-202ENST00000357881 RAI14Q9P0K7 980 aa10.83□□□□□ -0.68
RFX4-202ENST00000357881 FMN2Q9NZ56 1722 aa10.83□□□□□ -0.68
RFX4-202ENST00000357881 KIF1BO60333 1816 aa10.82□□□□□ -0.68
RFX4-202ENST00000357881 EFCC1Q9HA90 598 aa10.82□□□□□ -0.68
RFX4-202ENST00000357881 ARID4AP29374 1257 aaPredicted RBP10.81□□□□□ -0.68
RFX4-202ENST00000357881 ZNF513Q8N8E2 541 aaPredicted RBP10.81□□□□□ -0.68
RFX4-202ENST00000357881 ZNF428Q96B54 188 aa10.81□□□□□ -0.68
RFX4-202ENST00000357881 SGSM3Q96HU1 749 aa10.81□□□□□ -0.68
RFX4-202ENST00000357881 MYCBPQ99417 103 aaPredicted RBP10.81□□□□□ -0.68
RFX4-202ENST00000357881 MYH16Q9H6N6 1097 aa10.81□□□□□ -0.68
RFX4-202ENST00000357881 CASZ1Q86V15 1759 aa10.81□□□□□ -0.68
RFX4-202ENST00000357881 TULP2O00295 520 aa10.81□□□□□ -0.68
RFX4-202ENST00000357881 HNRNPUQ00839 825 aaKnown RBP eCLIP10.81□□□□□ -0.68
RFX4-202ENST00000357881 NBPF10Q6P3W6 841 aaKnown RBP10.81□□□□□ -0.68
RFX4-202ENST00000357881 SEPT12Q8IYM1 358 aa10.81□□□□□ -0.68
RFX4-202ENST00000357881 R3HCC1Q9Y3T6 440 aaKnown RBP10.81□□□□□ -0.68
RFX4-202ENST00000357881 CCDC172P0C7W6 258 aa10.8□□□□□ -0.68
RFX4-202ENST00000357881 BORCS6Q96GS4 357 aa10.8□□□□□ -0.68
RFX4-202ENST00000357881 TERF2IPQ9NYB0 399 aa10.8□□□□□ -0.68
RFX4-202ENST00000357881 BRPF1P55201 1214 aaPredicted RBP10.8□□□□□ -0.68
RFX4-202ENST00000357881 DEFB132Q7Z7B7 95 aa10.8□□□□□ -0.68
RFX4-202ENST00000357881 SIN3AQ96ST3 1273 aa10.8□□□□□ -0.68
RFX4-202ENST00000357881 SBNO1A3KN83 1393 aa10.79□□□□□ -0.68
RFX4-202ENST00000357881 ZBED9Q6R2W3 1325 aa10.79□□□□□ -0.68
RFX4-202ENST00000357881 C1QTNF8P60827 252 aa10.79□□□□□ -0.68
RFX4-202ENST00000357881 ARHGEF10O15013 1369 aa10.79□□□□□ -0.68
RFX4-202ENST00000357881 RGL2O15211 777 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 NBPF8Q3BBV2 869 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 NBPF14Q5TI25 921 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 ZNF771Q7L3S4 317 aaPredicted RBP10.78□□□□□ -0.68
RFX4-202ENST00000357881 TIGD1Q96MW7 591 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 TSPYL1Q9H0U9 437 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 KDM4AO75164 1064 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 NECTIN2Q92692 538 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 ANKRD50Q9ULJ7 1429 aa10.78□□□□□ -0.68
RFX4-202ENST00000357881 TECPR2O15040 1411 aa10.77□□□□□ -0.68
RFX4-202ENST00000357881 NBPF6Q5VWK0 638 aa10.77□□□□□ -0.68
RFX4-202ENST00000357881 NBPF5PQ86XG9 351 aaPredicted RBP10.77□□□□□ -0.68
RFX4-202ENST00000357881 NBPF4Q96M43 638 aa10.77□□□□□ -0.68
RFX4-202ENST00000357881 SMC4Q9NTJ3 1288 aa10.77□□□□□ -0.68
RFX4-202ENST00000357881 MRE11P49959 708 aa10.77□□□□□ -0.69
RFX4-202ENST00000357881 CCDC96Q2M329 555 aa10.77□□□□□ -0.69
RFX4-202ENST00000357881 KANK4Q5T7N3 995 aaPredicted RBP10.77□□□□□ -0.69
RFX4-202ENST00000357881 CASC1Q6TDU7 716 aa10.77□□□□□ -0.69
RFX4-202ENST00000357881 NCAPGQ9BPX3 1015 aa10.77□□□□□ -0.69
RFX4-202ENST00000357881 SPON1Q9HCB6 807 aa10.77□□□□□ -0.69
RFX4-202ENST00000357881 MAP3K5Q99683 1374 aa10.77□□□□□ -0.69
RFX4-202ENST00000357881 TNS3Q68CZ2 1445 aa10.76□□□□□ -0.69
RFX4-202ENST00000357881 SENP3-EIF4A1A0A087X0R7 540 aa10.76□□□□□ -0.69
RFX4-202ENST00000357881 ECM2O94769 699 aaPredicted RBP10.76□□□□□ -0.69
RFX4-202ENST00000357881 DDX10Q13206 875 aaKnown RBP10.76□□□□□ -0.69
RFX4-202ENST00000357881 DNAJC14Q6Y2X3 702 aaPredicted RBP10.76□□□□□ -0.69
RFX4-202ENST00000357881 DLC1Q96QB1 1528 aa10.76□□□□□ -0.69
RFX4-202ENST00000357881 SPATA31A3Q5VYP0 1347 aa10.76□□□□□ -0.69
RFX4-202ENST00000357881 SSR1P43307 286 aaKnown RBP10.75□□□□□ -0.69
RFX4-202ENST00000357881 CALR3Q96L12 384 aaKnown RBP10.75□□□□□ -0.69
RFX4-202ENST00000357881 CCDC66A2RUB6 948 aa10.75□□□□□ -0.69
RFX4-202ENST00000357881 ATP2B3Q16720 1220 aa10.75□□□□□ -0.69
RFX4-202ENST00000357881 IFT172Q9UG01 1749 aa10.75□□□□□ -0.69
RFX4-202ENST00000357881 METP08581 1390 aa10.75□□□□□ -0.69
RFX4-202ENST00000357881 ROCK1Q13464 1354 aa10.75□□□□□ -0.69
RFX4-202ENST00000357881 RPGRIP1LQ68CZ1 1315 aa10.74□□□□□ -0.69
RFX4-202ENST00000357881 KCNQ2O43526 872 aa10.74□□□□□ -0.69
RFX4-202ENST00000357881 ARMCX6Q7L4S7 300 aa10.74□□□□□ -0.69
RFX4-202ENST00000357881 FAM177A1Q8N128 213 aaPredicted RBP10.74□□□□□ -0.69
RFX4-202ENST00000357881 CAMKK2Q96RR4 588 aa10.74□□□□□ -0.69
RFX4-202ENST00000357881 RRP7BPQ9NSQ0 103 aa10.74□□□□□ -0.69
RFX4-202ENST00000357881 CRYBG1Q9Y4K1 1723 aa10.74□□□□□ -0.69
RFX4-202ENST00000357881 CT47B1P0C2W7 299 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms