RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.29
CAPN3-205ENST00000357568 COL3A1P02461 1466 aaPredicted RBP13.21□□□□□ -0.29
CAPN3-205ENST00000357568 ZNF500O60304 480 aaPredicted RBP13.21□□□□□ -0.3
CAPN3-205ENST00000357568 MTHFSP49914 203 aa13.21□□□□□ -0.3
CAPN3-205ENST00000357568 CHD1LQ86WJ1 897 aa13.21□□□□□ -0.3
CAPN3-205ENST00000357568 BCL2L13Q9BXK5 485 aa13.21□□□□□ -0.3
CAPN3-205ENST00000357568 PDE4CQ08493 712 aa13.2□□□□□ -0.3
CAPN3-205ENST00000357568 RBM33Q96EV2 1170 aaKnown RBP13.2□□□□□ -0.3
CAPN3-205ENST00000357568 KIF1AQ12756 1690 aa13.2□□□□□ -0.3
CAPN3-205ENST00000357568 MSNP26038 577 aaKnown RBP13.2□□□□□ -0.3
CAPN3-205ENST00000357568 RBM10P98175 930 aaKnown RBP13.2□□□□□ -0.3
CAPN3-205ENST00000357568 NEUROD2Q15784 382 aa13.2□□□□□ -0.3
CAPN3-205ENST00000357568 CDK19Q9BWU1 502 aa13.2□□□□□ -0.3
CAPN3-205ENST00000357568 ANKRD26Q9UPS8 1709 aa13.19□□□□□ -0.3
CAPN3-205ENST00000357568 HAP1P54257 671 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-205ENST00000357568 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
CAPN3-205ENST00000357568 ATAD2Q6PL18 1390 aa13.19□□□□□ -0.3
CAPN3-205ENST00000357568 SSH1Q8WYL5 1049 aa13.19□□□□□ -0.3
CAPN3-205ENST00000357568 PDLIM2Q96JY6 352 aa13.19□□□□□ -0.3
CAPN3-205ENST00000357568 C1orf167Q5SNV9 1468 aa13.19□□□□□ -0.3
CAPN3-205ENST00000357568 ATP7BP35670 1465 aa13.18□□□□□ -0.3
CAPN3-205ENST00000357568 TOM1O60784 492 aa13.18□□□□□ -0.3
CAPN3-205ENST00000357568 NUCB2P80303 420 aa13.18□□□□□ -0.3
CAPN3-205ENST00000357568 NOL7Q9UMY1 257 aaKnown RBP13.18□□□□□ -0.3
CAPN3-205ENST00000357568 CSPP1Q1MSJ5 1256 aa13.18□□□□□ -0.3
CAPN3-205ENST00000357568 PLEKHF1Q96S99 279 aa13.18□□□□□ -0.3
CAPN3-205ENST00000357568 EXOSC9Q06265 439 aaKnown RBP13.17□□□□□ -0.3
CAPN3-205ENST00000357568 RGPD8O14715 1765 aaPredicted RBP13.17□□□□□ -0.3
CAPN3-205ENST00000357568 BAG4O95429 457 aaKnown RBP13.17□□□□□ -0.3
CAPN3-205ENST00000357568 ARHGAP45Q92619 1136 aa13.17□□□□□ -0.3
CAPN3-205ENST00000357568 TMEM57Q8N5G2 664 aa13.16□□□□□ -0.3
CAPN3-205ENST00000357568 FOXD4L1Q9NU39 408 aa13.16□□□□□ -0.3
CAPN3-205ENST00000357568 TMPOP42166 694 aaKnown RBP13.16□□□□□ -0.3
CAPN3-205ENST00000357568 RABEP1Q15276 862 aa13.16□□□□□ -0.3
CAPN3-205ENST00000357568 CYP2E1P05181 493 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-205ENST00000357568 SRPK2P78362 688 aaKnown RBP13.16□□□□□ -0.3
CAPN3-205ENST00000357568 NUDT16Q96DE0 195 aaKnown RBP13.16□□□□□ -0.3
CAPN3-205ENST00000357568 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
CAPN3-205ENST00000357568 SLAIN2Q9P270 581 aa13.16□□□□□ -0.3
CAPN3-205ENST00000357568 NOB1Q9ULX3 412 aaKnown RBP13.16□□□□□ -0.3
CAPN3-205ENST00000357568 KIF24Q5T7B8 1368 aa13.15□□□□□ -0.3
CAPN3-205ENST00000357568 U2AF1L5P0DN76 240 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-205ENST00000357568 U2AF1Q01081 240 aaKnown RBP eCLIP13.15□□□□□ -0.3
CAPN3-205ENST00000357568 TRIM35Q9UPQ4 493 aa13.15□□□□□ -0.3
CAPN3-205ENST00000357568 CCDC61Q9Y6R9 512 aa13.15□□□□□ -0.31
CAPN3-205ENST00000357568 DDX49Q9Y6V7 483 aaKnown RBP13.15□□□□□ -0.31
CAPN3-205ENST00000357568 PRR36Q9H6K5 1346 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 CDC45O75419 566 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 RIPK4P57078 832 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 CABP2Q9NPB3 220 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 ROBO1Q9Y6N7 1651 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 DYNC1I1O14576 645 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 SLC12A5Q9H2X9 1139 aa13.14□□□□□ -0.31
CAPN3-205ENST00000357568 PLEKHG3A1L390 1219 aa13.13□□□□□ -0.31
CAPN3-205ENST00000357568 SSFA2P28290 1259 aa13.13□□□□□ -0.31
CAPN3-205ENST00000357568 TBC1D9Q6ZT07 1266 aa13.13□□□□□ -0.31
CAPN3-205ENST00000357568 AKAP12Q02952 1782 aa13.13□□□□□ -0.31
CAPN3-205ENST00000357568 UBAP1LF5GYI3 381 aa13.13□□□□□ -0.31
CAPN3-205ENST00000357568 AHDC1Q5TGY3 1603 aaPredicted RBP13.12□□□□□ -0.31
CAPN3-205ENST00000357568 GAS2L2Q8NHY3 880 aa13.12□□□□□ -0.31
CAPN3-205ENST00000357568 LNPKQ9C0E8 428 aa13.12□□□□□ -0.31
CAPN3-205ENST00000357568 TSR2Q969E8 191 aaKnown RBP13.12□□□□□ -0.31
CAPN3-205ENST00000357568 PNPLA6Q8IY17 1366 aa13.11□□□□□ -0.31
CAPN3-205ENST00000357568 PHF8Q9UPP1 1060 aa13.11□□□□□ -0.31
CAPN3-205ENST00000357568 ZKSCAN5Q9Y2L8 839 aa13.11□□□□□ -0.31
CAPN3-205ENST00000357568 ZSCAN23Q3MJ62 389 aa13.11□□□□□ -0.31
CAPN3-205ENST00000357568 SMAP1Q8IYB5 467 aaPredicted RBP13.11□□□□□ -0.31
CAPN3-205ENST00000357568 LMBRD1Q9NUN5 540 aa13.11□□□□□ -0.31
CAPN3-205ENST00000357568 CD2BP2O95400 341 aaKnown RBP13.1□□□□□ -0.31
CAPN3-205ENST00000357568 TULP1O00294 542 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-205ENST00000357568 ZBTB7BO15156 539 aaPredicted RBP13.1□□□□□ -0.31
CAPN3-205ENST00000357568 ESCO1Q5FWF5 840 aa13.1□□□□□ -0.31
CAPN3-205ENST00000357568 BRINP3Q76B58 766 aa13.1□□□□□ -0.31
CAPN3-205ENST00000357568 CCDC39Q9UFE4 941 aa13.1□□□□□ -0.31
CAPN3-205ENST00000357568 MON2Q7Z3U7 1717 aa13.09□□□□□ -0.31
CAPN3-205ENST00000357568 PDIA4P13667 645 aaKnown RBP13.09□□□□□ -0.31
CAPN3-205ENST00000357568 KLHL34Q8N239 644 aa13.09□□□□□ -0.31
CAPN3-205ENST00000357568 CPSF1Q10570 1443 aaKnown RBP13.08□□□□□ -0.31
CAPN3-205ENST00000357568 TNNT2P45379 298 aaPredicted RBP13.08□□□□□ -0.31
CAPN3-205ENST00000357568 ORAI2Q96SN7 254 aa13.08□□□□□ -0.31
CAPN3-205ENST00000357568 ABCC4O15439 1325 aa13.08□□□□□ -0.32
CAPN3-205ENST00000357568 NUTM2FA1L443 756 aa13.08□□□□□ -0.32
CAPN3-205ENST00000357568 SASS6Q6UVJ0 657 aa13.08□□□□□ -0.32
CAPN3-205ENST00000357568 PRDM4Q9UKN5 801 aa13.08□□□□□ -0.32
CAPN3-205ENST00000357568 NPHP3Q7Z494 1330 aa13.08□□□□□ -0.32
CAPN3-205ENST00000357568 ANKRD45Q5TZF3 282 aa13.07□□□□□ -0.32
CAPN3-205ENST00000357568 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.07□□□□□ -0.32
CAPN3-205ENST00000357568 CABP1Q9NZU7 370 aa13.07□□□□□ -0.32
CAPN3-205ENST00000357568 CD163L1Q9NR16 1453 aa13.07□□□□□ -0.32
CAPN3-205ENST00000357568 PHLPP1O60346 1717 aa13.07□□□□□ -0.32
CAPN3-205ENST00000357568 TRPM3Q9HCF6 1732 aaPredicted RBP13.07□□□□□ -0.32
CAPN3-205ENST00000357568 NRKQ7Z2Y5 1582 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 MBD3O95983 291 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 LRSAM1Q6UWE0 723 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 TERF2IPQ9NYB0 399 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 PXDNQ92626 1479 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 HDGFL2Q7Z4V5 671 aaPredicted RBP13.06□□□□□ -0.32
CAPN3-205ENST00000357568 FBXO41Q8TF61 875 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 BCL11BQ9C0K0 894 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms