RNA–Protein interactions for RNA: ENST00000357482.5

USP6-202, Transcript of ubiquitin specific peptidase 6, humanhuman

TSL 1 (best)

Gene USP6, Length 1,947 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6-202ENST00000357482 BECN1Q14457 450 aa18.55■□□□□ 0.56
USP6-202ENST00000357482 AKAP12Q02952 1782 aa18.55■□□□□ 0.56
USP6-202ENST00000357482 PIK3C2AO00443 1686 aa18.54■□□□□ 0.56
USP6-202ENST00000357482 SOX12O15370 315 aa18.54■□□□□ 0.56
USP6-202ENST00000357482 LETM1O95202 739 aaPredicted RBP18.54■□□□□ 0.56
USP6-202ENST00000357482 PPP4R3BQ5MIZ7 849 aa18.54■□□□□ 0.56
USP6-202ENST00000357482 SSH2Q76I76 1423 aa18.54■□□□□ 0.56
USP6-202ENST00000357482 SPATA31A1Q5TZJ5 1347 aa18.53■□□□□ 0.56
USP6-202ENST00000357482 TEX2Q8IWB9 1127 aa18.53■□□□□ 0.56
USP6-202ENST00000357482 TTC21AQ8NDW8 1320 aa18.53■□□□□ 0.56
USP6-202ENST00000357482 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.53■□□□□ 0.56
USP6-202ENST00000357482 TMEM51Q9NW97 253 aa18.53■□□□□ 0.56
USP6-202ENST00000357482 CPSF1Q10570 1443 aaKnown RBP18.53■□□□□ 0.56
USP6-202ENST00000357482 CAMTA1Q9Y6Y1 1673 aa18.52■□□□□ 0.56
USP6-202ENST00000357482 BLMP54132 1417 aaPredicted RBP18.52■□□□□ 0.56
USP6-202ENST00000357482 HDGFL2Q7Z4V5 671 aaPredicted RBP18.52■□□□□ 0.56
USP6-202ENST00000357482 LARP1Q6PKG0 1096 aaKnown RBP18.51■□□□□ 0.55
USP6-202ENST00000357482 EXOC6Q8TAG9 804 aa18.51■□□□□ 0.55
USP6-202ENST00000357482 SLIT3O75094 1523 aa18.51■□□□□ 0.55
USP6-202ENST00000357482 CHRM1P11229 460 aaPredicted RBP18.5■□□□□ 0.55
USP6-202ENST00000357482 RIPK4P57078 832 aa18.5■□□□□ 0.55
USP6-202ENST00000357482 SLC12A5Q9H2X9 1139 aa18.5■□□□□ 0.55
USP6-202ENST00000357482 LMO7Q8WWI1 1683 aa18.5■□□□□ 0.55
USP6-202ENST00000357482 FAM182BQ5T319 152 aa18.49■□□□□ 0.55
USP6-202ENST00000357482 KCNH5Q8NCM2 988 aa18.49■□□□□ 0.55
USP6-202ENST00000357482 ANP32BQ92688 251 aaKnown RBP18.49■□□□□ 0.55
USP6-202ENST00000357482 TERF2IPQ9NYB0 399 aa18.49■□□□□ 0.55
USP6-202ENST00000357482 ZHX1Q9UKY1 873 aaPredicted RBP18.49■□□□□ 0.55
USP6-202ENST00000357482 MON2Q7Z3U7 1717 aa18.49■□□□□ 0.55
USP6-202ENST00000357482 EP400Q96L91 3159 aa18.48■□□□□ 0.55
USP6-202ENST00000357482 DYNC1I1O14576 645 aa18.48■□□□□ 0.55
USP6-202ENST00000357482 THSD7AQ9UPZ6 1657 aa18.48■□□□□ 0.55
USP6-202ENST00000357482 COL5A2P05997 1499 aaPredicted RBP18.48■□□□□ 0.55
USP6-202ENST00000357482 TCP11L2Q8N4U5 519 aa18.47■□□□□ 0.55
USP6-202ENST00000357482 AATKQ6ZMQ8 1374 aa18.47■□□□□ 0.55
USP6-202ENST00000357482 TESK2Q96S53 571 aa18.47■□□□□ 0.55
USP6-202ENST00000357482 DEFB132Q7Z7B7 95 aa18.46■□□□□ 0.55
USP6-202ENST00000357482 GRPEL1Q9HAV7 217 aa18.46■□□□□ 0.55
USP6-202ENST00000357482 ZRANB1Q9UGI0 708 aa18.46■□□□□ 0.55
USP6-202ENST00000357482 PDE3BQ13370 1112 aa18.45■□□□□ 0.54
USP6-202ENST00000357482 NME9Q86XW9 330 aa18.45■□□□□ 0.54
USP6-202ENST00000357482 PUS7Q96PZ0 661 aaKnown RBP18.45■□□□□ 0.54
USP6-202ENST00000357482 CCDC94Q9BW85 323 aaPredicted RBP18.45■□□□□ 0.54
USP6-202ENST00000357482 CD163L1Q9NR16 1453 aa18.45■□□□□ 0.54
USP6-202ENST00000357482 BARGINQ6ZT62 677 aa18.45■□□□□ 0.54
USP6-202ENST00000357482 TOM1L2Q6ZVM7 507 aa18.45■□□□□ 0.54
USP6-202ENST00000357482 POLR3GLQ9BT43 218 aa18.45■□□□□ 0.54
USP6-202ENST00000357482 A0A1W2PP64 1363 aa18.44■□□□□ 0.54
USP6-202ENST00000357482 CRB1P82279 1406 aa18.44■□□□□ 0.54
USP6-202ENST00000357482 PANK2Q9BZ23 570 aa18.44■□□□□ 0.54
USP6-202ENST00000357482 CSB-PGBD3P0DP91 1061 aa18.43■□□□□ 0.54
USP6-202ENST00000357482 ZSCAN20P17040 1043 aaPredicted RBP18.43■□□□□ 0.54
USP6-202ENST00000357482 TMF1P82094 1093 aa18.43■□□□□ 0.54
USP6-202ENST00000357482 ERBB4Q15303 1308 aa18.43■□□□□ 0.54
USP6-202ENST00000357482 EDC4Q6P2E9 1401 aaKnown RBP18.43■□□□□ 0.54
USP6-202ENST00000357482 BAG6P46379 1132 aa18.43■□□□□ 0.54
USP6-202ENST00000357482 ARHGEF25Q86VW2 580 aa18.43■□□□□ 0.54
USP6-202ENST00000357482 FAM13BQ9NYF5 915 aa18.43■□□□□ 0.54
USP6-202ENST00000357482 THRAP3Q9Y2W1 955 aaKnown RBP18.43■□□□□ 0.54
USP6-202ENST00000357482 ZSCAN30Q86W11 494 aa18.42■□□□□ 0.54
USP6-202ENST00000357482 AXIN2Q9Y2T1 843 aa18.42■□□□□ 0.54
USP6-202ENST00000357482 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
USP6-202ENST00000357482 RCAN3Q9UKA8 241 aa18.41■□□□□ 0.54
USP6-202ENST00000357482 C8orf34Q49A92 452 aa18.41■□□□□ 0.54
USP6-202ENST00000357482 NFAT5O94916 1531 aa18.4■□□□□ 0.54
USP6-202ENST00000357482 FAM196AQ6ZSG2 479 aa18.4■□□□□ 0.54
USP6-202ENST00000357482 CENPQQ7L2Z9 268 aaPredicted RBP18.4■□□□□ 0.54
USP6-202ENST00000357482 USP31Q70CQ4 1352 aa18.39■□□□□ 0.54
USP6-202ENST00000357482 WDR17Q8IZU2 1322 aa18.39■□□□□ 0.54
USP6-202ENST00000357482 HS1BP3Q53T59 392 aa18.39■□□□□ 0.53
USP6-202ENST00000357482 COL18A1P39060 1754 aa18.39■□□□□ 0.53
USP6-202ENST00000357482 RGPD1P0DJD0 1748 aa18.39■□□□□ 0.53
USP6-202ENST00000357482 CCDC173Q0VFZ6 552 aa18.39■□□□□ 0.53
USP6-202ENST00000357482 TRIM37O94972 964 aa18.37■□□□□ 0.53
USP6-202ENST00000357482 ZNF830Q96NB3 372 aaPredicted RBP18.37■□□□□ 0.53
USP6-202ENST00000357482 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
USP6-202ENST00000357482 MCM4P33991 863 aa18.37■□□□□ 0.53
USP6-202ENST00000357482 SLC20A2Q08357 652 aa18.37■□□□□ 0.53
USP6-202ENST00000357482 CDCA8Q53HL2 280 aa18.37■□□□□ 0.53
USP6-202ENST00000357482 ANTXR1Q9H6X2 564 aa18.37■□□□□ 0.53
USP6-202ENST00000357482 CDK11BP21127 795 aaKnown RBP18.36■□□□□ 0.53
USP6-202ENST00000357482 EN1Q05925 392 aaPredicted RBP18.36■□□□□ 0.53
USP6-202ENST00000357482 CSPP1Q1MSJ5 1256 aa18.36■□□□□ 0.53
USP6-202ENST00000357482 ZFP91Q96JP5 570 aaPredicted RBP18.36■□□□□ 0.53
USP6-202ENST00000357482 BCCIPQ9P287 314 aaKnown RBP eCLIP18.36■□□□□ 0.53
USP6-202ENST00000357482 USP54Q70EL1 1684 aa18.36■□□□□ 0.53
USP6-202ENST00000357482 MSNP26038 577 aaKnown RBP18.35■□□□□ 0.53
USP6-202ENST00000357482 PPP1R9BQ96SB3 815 aa18.35■□□□□ 0.53
USP6-202ENST00000357482 DDB1Q16531 1140 aa18.35■□□□□ 0.53
USP6-202ENST00000357482 COG3Q96JB2 828 aa18.35■□□□□ 0.53
USP6-202ENST00000357482 ANKRD36BQ8N2N9 1353 aa18.35■□□□□ 0.53
USP6-202ENST00000357482 PARP4Q9UKK3 1724 aaKnown RBP18.34■□□□□ 0.53
USP6-202ENST00000357482 KDM2BQ8NHM5 1336 aa18.34■□□□□ 0.53
USP6-202ENST00000357482 PTMSP20962 102 aa18.34■□□□□ 0.53
USP6-202ENST00000357482 LTN1O94822 1766 aa18.34■□□□□ 0.53
USP6-202ENST00000357482 OVOS2A0A0J9YW53 1432 aa18.34■□□□□ 0.53
USP6-202ENST00000357482 OVOS2Q6IE36 1432 aa18.34■□□□□ 0.53
USP6-202ENST00000357482 CARD10Q9BWT7 1032 aa18.33■□□□□ 0.53
USP6-202ENST00000357482 ABCC6O95255 1503 aa18.33■□□□□ 0.52
USP6-202ENST00000357482 DDX11L8A8MPP1 907 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms