RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 COL16A1Q07092 1604 aaPredicted RBP16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 NUTM2BA6NNL0 878 aaPredicted RBP16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 NUTM2EB1AL46 878 aaPredicted RBP16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 CSB-PGBD3P0DP91 1061 aa16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 NUTM2AQ8IVF1 878 aaPredicted RBP16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 PNNQ9H307 717 aaKnown RBP16.19■□□□□ 0.18
RTFDC1-202ENST00000357348 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
RTFDC1-202ENST00000357348 WWC1Q8IX03 1113 aa16.18■□□□□ 0.18
RTFDC1-202ENST00000357348 NGEFQ8N5V2 710 aa16.18■□□□□ 0.18
RTFDC1-202ENST00000357348 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
RTFDC1-202ENST00000357348 RTN4Q9NQC3 1192 aaKnown RBP16.18■□□□□ 0.18
RTFDC1-202ENST00000357348 DAXXQ9UER7 740 aaPredicted RBP16.18■□□□□ 0.18
RTFDC1-202ENST00000357348 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
RTFDC1-202ENST00000357348 COL18A1P39060 1754 aa16.17■□□□□ 0.18
RTFDC1-202ENST00000357348 ADAMTS2O95450 1211 aa16.17■□□□□ 0.18
RTFDC1-202ENST00000357348 ERBB3P21860 1342 aa16.17■□□□□ 0.18
RTFDC1-202ENST00000357348 FAM83GA6ND36 823 aa16.17■□□□□ 0.18
RTFDC1-202ENST00000357348 NLRP2Q9NX02 1062 aa16.17■□□□□ 0.18
RTFDC1-202ENST00000357348 DLG5Q8TDM6 1919 aa16.16■□□□□ 0.18
RTFDC1-202ENST00000357348 STRN4Q9NRL3 753 aa16.16■□□□□ 0.18
RTFDC1-202ENST00000357348 THUMPD2Q9BTF0 503 aaKnown RBP16.15■□□□□ 0.18
RTFDC1-202ENST00000357348 TRIM35Q9UPQ4 493 aa16.15■□□□□ 0.18
RTFDC1-202ENST00000357348 CPDO75976 1380 aa16.14■□□□□ 0.17
RTFDC1-202ENST00000357348 DCTN1Q14203 1278 aa16.14■□□□□ 0.17
RTFDC1-202ENST00000357348 NFE2L2Q16236 605 aa16.14■□□□□ 0.17
RTFDC1-202ENST00000357348 CAMTA1Q9Y6Y1 1673 aa16.13■□□□□ 0.17
RTFDC1-202ENST00000357348 MTHFSDQ2M296 383 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-202ENST00000357348 KDRP35968 1356 aa16.13■□□□□ 0.17
RTFDC1-202ENST00000357348 E9PSI1 815 aa16.13■□□□□ 0.17
RTFDC1-202ENST00000357348 PDE3AQ14432 1141 aa16.12■□□□□ 0.17
RTFDC1-202ENST00000357348 BTG4Q9NY30 223 aa16.12■□□□□ 0.17
RTFDC1-202ENST00000357348 FRAT2O75474 233 aaPredicted RBP16.11■□□□□ 0.17
RTFDC1-202ENST00000357348 EVA1CP58658 441 aa16.11■□□□□ 0.17
RTFDC1-202ENST00000357348 HSPA1LP34931 641 aa16.11■□□□□ 0.17
RTFDC1-202ENST00000357348 TOM1L2Q6ZVM7 507 aa16.11■□□□□ 0.17
RTFDC1-202ENST00000357348 COL22A1Q8NFW1 1626 aaPredicted RBP16.11■□□□□ 0.17
RTFDC1-202ENST00000357348 RGS3P49796 1198 aa16.1■□□□□ 0.17
RTFDC1-202ENST00000357348 MCM10Q7L590 875 aa16.1■□□□□ 0.17
RTFDC1-202ENST00000357348 LMO7Q8WWI1 1683 aa16.09■□□□□ 0.17
RTFDC1-202ENST00000357348 LARP1Q6PKG0 1096 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-202ENST00000357348 PHF23Q9BUL5 403 aaPredicted RBP16.09■□□□□ 0.17
RTFDC1-202ENST00000357348 VIRMAQ69YN4 1812 aaKnown RBP16.09■□□□□ 0.17
RTFDC1-202ENST00000357348 IGHDP01880 384 aa16.09■□□□□ 0.17
RTFDC1-202ENST00000357348 CCDC27Q2M243 656 aa16.09■□□□□ 0.17
RTFDC1-202ENST00000357348 BCAR3O75815 825 aa16.08■□□□□ 0.16
RTFDC1-202ENST00000357348 TSR2Q969E8 191 aaKnown RBP16.08■□□□□ 0.16
RTFDC1-202ENST00000357348 COL5A2P05997 1499 aaPredicted RBP16.08■□□□□ 0.16
RTFDC1-202ENST00000357348 AAMPQ13685 434 aa16.07■□□□□ 0.16
RTFDC1-202ENST00000357348 WDR17Q8IZU2 1322 aa16.06■□□□□ 0.16
RTFDC1-202ENST00000357348 WDR63Q8IWG1 891 aa16.06■□□□□ 0.16
RTFDC1-202ENST00000357348 FAM43AQ8N2R8 423 aa16.06■□□□□ 0.16
RTFDC1-202ENST00000357348 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
RTFDC1-202ENST00000357348 GAS2L2Q8NHY3 880 aa16.04■□□□□ 0.16
RTFDC1-202ENST00000357348 CLUAP1Q96AJ1 413 aa16.04■□□□□ 0.16
RTFDC1-202ENST00000357348 FAM208AQ9UK61 1670 aaKnown RBP16.04■□□□□ 0.16
RTFDC1-202ENST00000357348 JCADQ9P266 1359 aa16.04■□□□□ 0.16
RTFDC1-202ENST00000357348 RTF1Q92541 710 aaKnown RBP16.04■□□□□ 0.16
RTFDC1-202ENST00000357348 C8orf37Q96NL8 207 aa16.04■□□□□ 0.16
RTFDC1-202ENST00000357348 COL14A1Q05707 1796 aaKnown RBP16.04■□□□□ 0.16
RTFDC1-202ENST00000357348 ZNF530Q6P9A1 599 aaPredicted RBP16.03■□□□□ 0.16
RTFDC1-202ENST00000357348 MEGF6O75095 1541 aa16.03■□□□□ 0.16
RTFDC1-202ENST00000357348 ABCC6O95255 1503 aa16.03■□□□□ 0.16
RTFDC1-202ENST00000357348 GNAT3A8MTJ3 354 aa16.02■□□□□ 0.16
RTFDC1-202ENST00000357348 TATP17735 454 aaPredicted RBP16.02■□□□□ 0.16
RTFDC1-202ENST00000357348 LMOD3Q0VAK6 560 aa16.02■□□□□ 0.16
RTFDC1-202ENST00000357348 PLEKHO1Q53GL0 409 aaPredicted RBP16.02■□□□□ 0.16
RTFDC1-202ENST00000357348 MIS18AQ9NYP9 233 aa16.02■□□□□ 0.16
RTFDC1-202ENST00000357348 PLCH1Q4KWH8 1693 aa16.02■□□□□ 0.16
RTFDC1-202ENST00000357348 NCAPD2Q15021 1401 aa16.01■□□□□ 0.15
RTFDC1-202ENST00000357348 BECN1Q14457 450 aa16.01■□□□□ 0.15
RTFDC1-202ENST00000357348 MPRIPQ6WCQ1 1025 aa16.01■□□□□ 0.15
RTFDC1-202ENST00000357348 ANTXR1Q9H6X2 564 aa16.01■□□□□ 0.15
RTFDC1-202ENST00000357348 SEC24BO95487 1268 aa16■□□□□ 0.15
RTFDC1-202ENST00000357348 NGLY1Q96IV0 654 aa16■□□□□ 0.15
RTFDC1-202ENST00000357348 MYH16Q9H6N6 1097 aa16■□□□□ 0.15
RTFDC1-202ENST00000357348 MAP3K5Q99683 1374 aa16■□□□□ 0.15
RTFDC1-202ENST00000357348 NCBP3Q53F19 620 aaKnown RBP16■□□□□ 0.15
RTFDC1-202ENST00000357348 LGR6Q9HBX8 967 aa16■□□□□ 0.15
RTFDC1-202ENST00000357348 CCDC9Q9Y3X0 531 aaKnown RBP16■□□□□ 0.15
RTFDC1-202ENST00000357348 C1orf141Q5JVX7 400 aa15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 IL17REQ8NFR9 667 aa15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 CARD10Q9BWT7 1032 aa15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 ELL2O00472 640 aaPredicted RBP15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 EXOSC9Q06265 439 aaKnown RBP15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 AMOTQ4VCS5 1084 aa15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 CRB1P82279 1406 aa15.99■□□□□ 0.15
RTFDC1-202ENST00000357348 MBIPQ9NS73 344 aa15.98■□□□□ 0.15
RTFDC1-202ENST00000357348 LRP6O75581 1613 aa15.98■□□□□ 0.15
RTFDC1-202ENST00000357348 MEX3CQ5U5Q3 659 aaKnown RBP15.98■□□□□ 0.15
RTFDC1-202ENST00000357348 IL2RBP14784 551 aa15.97■□□□□ 0.15
RTFDC1-202ENST00000357348 CALD1Q05682 793 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 AKAP4Q5JQC9 854 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 IL16Q14005 1332 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 GNAI1P63096 354 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 DDX54Q8TDD1 881 aaKnown RBP15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 PANK1Q8TE04 598 aa15.96■□□□□ 0.15
RTFDC1-202ENST00000357348 CFAP44Q96MT7 982 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms