RNA–Protein interactions for RNA: ENST00000357085.4

TRIM38-201, Transcript of tripartite motif containing 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM38, Length 9,413 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38-201ENST00000357085 PIBF1Q8WXW3 757 aa7.81□□□□□ -1.16
TRIM38-201ENST00000357085 IGHDP01880 384 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 BRD2P25440 801 aaKnown RBP7.8□□□□□ -1.16
TRIM38-201ENST00000357085 RTF1Q92541 710 aaKnown RBP7.8□□□□□ -1.16
TRIM38-201ENST00000357085 TRIM6-TRIM34B2RNG4 842 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 TRIM34Q9BYJ4 488 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 AOX1Q06278 1338 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 CEP57L1Q8IYX8 460 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 URB2Q14146 1524 aaKnown RBP7.8□□□□□ -1.16
TRIM38-201ENST00000357085 DCTN1Q14203 1278 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 PPP6R1Q9UPN7 881 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 RARSP54136 660 aaKnown RBP7.8□□□□□ -1.16
TRIM38-201ENST00000357085 BMS1Q14692 1282 aaKnown RBP7.8□□□□□ -1.16
TRIM38-201ENST00000357085 LNPKQ9C0E8 428 aa7.8□□□□□ -1.16
TRIM38-201ENST00000357085 SF3B2Q13435 895 aaKnown RBP7.79□□□□□ -1.16
TRIM38-201ENST00000357085 TRIM5Q9C035 493 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 MADDQ8WXG6 1647 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 ARAP3Q8WWN8 1544 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 ANKRD20A12PQ8NF67 263 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 RASSF4Q9H2L5 321 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 SETBP1Q9Y6X0 1596 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 NCOA3Q9Y6Q9 1424 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 ZSCAN12O43309 604 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 HDGFP51858 240 aaKnown RBP7.79□□□□□ -1.16
TRIM38-201ENST00000357085 NUCB1Q02818 461 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 ABCC1P33527 1531 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 CCDC150Q8NCX0 1101 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 SEC24BO95487 1268 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 ADCY5O95622 1261 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 MAP9Q49MG5 647 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 UBE2HP62256 183 aa7.79□□□□□ -1.16
TRIM38-201ENST00000357085 NOL8Q76FK4 1167 aaKnown RBP7.79□□□□□ -1.16
TRIM38-201ENST00000357085 ZNF397Q8NF99 534 aaPredicted RBP7.79□□□□□ -1.16
TRIM38-201ENST00000357085 DDX19AQ9NUU7 478 aaKnown RBP7.79□□□□□ -1.16
TRIM38-201ENST00000357085 GTF2E1P29083 439 aaPredicted RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 TUBB2AQ13885 445 aa7.78□□□□□ -1.16
TRIM38-201ENST00000357085 ZNF396Q96N95 335 aaPredicted RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 TUBB2BQ9BVA1 445 aa7.78□□□□□ -1.16
TRIM38-201ENST00000357085 KRT85P78386 507 aa7.78□□□□□ -1.16
TRIM38-201ENST00000357085 SPC24Q8NBT2 197 aa7.78□□□□□ -1.16
TRIM38-201ENST00000357085 DNAAF4Q8WXU2 420 aa7.78□□□□□ -1.16
TRIM38-201ENST00000357085 SOS1Q07889 1333 aaPredicted RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 PRIM1P49642 420 aaKnown RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 SMC3Q9UQE7 1217 aa7.78□□□□□ -1.16
TRIM38-201ENST00000357085 RRP7AQ9Y3A4 280 aaKnown RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 RPAP2Q8IXW5 612 aaPredicted RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 CCT4P50991 539 aaKnown RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 GNL2Q13823 731 aaKnown RBP7.78□□□□□ -1.16
TRIM38-201ENST00000357085 JMYQ8N9B5 988 aa7.78□□□□□ -1.16
TRIM38-201ENST00000357085 GNAI3P08754 354 aa7.77□□□□□ -1.16
TRIM38-201ENST00000357085 SLFNL1Q499Z3 407 aa7.77□□□□□ -1.16
TRIM38-201ENST00000357085 FAM135BQ49AJ0 1406 aa7.77□□□□□ -1.16
TRIM38-201ENST00000357085 CFAP45Q9UL16 551 aa7.77□□□□□ -1.17
TRIM38-201ENST00000357085 KINO60870 393 aaKnown RBP7.77□□□□□ -1.17
TRIM38-201ENST00000357085 MAP3K11Q16584 847 aa7.77□□□□□ -1.17
TRIM38-201ENST00000357085 FAM200AQ8TCP9 573 aa7.77□□□□□ -1.17
TRIM38-201ENST00000357085 RDXP35241 583 aaKnown RBP7.77□□□□□ -1.17
TRIM38-201ENST00000357085 GTF2F1P35269 517 aaKnown RBP eCLIP7.77□□□□□ -1.17
TRIM38-201ENST00000357085 HOMER1Q86YM7 354 aa7.77□□□□□ -1.17
TRIM38-201ENST00000357085 TARBP1Q13395 1621 aaKnown RBP7.77□□□□□ -1.17
TRIM38-201ENST00000357085 TCP11L2Q8N4U5 519 aa7.77□□□□□ -1.17
TRIM38-201ENST00000357085 C16orf45Q96MC5 204 aaPredicted RBP7.76□□□□□ -1.17
TRIM38-201ENST00000357085 SLC26A8Q96RN1 970 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 TMCO3Q6UWJ1 677 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 TRAPPC8Q9Y2L5 1435 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 RTEL1-TNFRSF6BF6WH68 1400 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 IPO7O95373 1038 aaKnown RBP7.76□□□□□ -1.17
TRIM38-201ENST00000357085 ERC1Q8IUD2 1116 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 DHX16O60231 1041 aaKnown RBP7.76□□□□□ -1.17
TRIM38-201ENST00000357085 OS9Q13438 667 aaPredicted RBP7.76□□□□□ -1.17
TRIM38-201ENST00000357085 ATL3Q6DD88 541 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 DISP3Q9P2K9 1392 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 BCL2L12Q9HB09 334 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 ATP8B1O43520 1251 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 RBSNQ9H1K0 784 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 CAMSAP1Q5T5Y3 1602 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 FOXD4L6Q3SYB3 417 aaPredicted RBP7.76□□□□□ -1.17
TRIM38-201ENST00000357085 FOXD4L3Q6VB84 417 aaPredicted RBP7.76□□□□□ -1.17
TRIM38-201ENST00000357085 MPNDQ8N594 471 aa7.76□□□□□ -1.17
TRIM38-201ENST00000357085 RBM28Q9NW13 759 aaKnown RBP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 MKRN1Q9UHC7 482 aaKnown RBP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 TTLL5Q6EMB2 1281 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 ZNF608Q9ULD9 1512 aaPredicted RBP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 ZNF521Q96K83 1311 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 MYO3AQ8NEV4 1616 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 PATL2C9JE40 543 aaKnown RBP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 FCHSD2O94868 740 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 SLC20A2Q08357 652 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 GAS2L3Q86XJ1 694 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 MYCBPQ99417 103 aaPredicted RBP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 KRT32Q14532 448 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 TEX2Q8IWB9 1127 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 RBM27Q9P2N5 1060 aaKnown RBP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 TNNT1P13805 278 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 DACH1Q9UI36 760 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 NSD3Q9BZ95 1437 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 ZSCAN20P17040 1043 aaPredicted RBP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 PTPRCP08575 1304 aa7.75□□□□□ -1.17
TRIM38-201ENST00000357085 SFPQP23246 707 aaKnown RBP eCLIP7.75□□□□□ -1.17
TRIM38-201ENST00000357085 U2AF2P26368 475 aaKnown RBP eCLIP7.75□□□□□ -1.174e-6■■■■□ 24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms