RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 UPF1Q92900 1129 aaKnown RBP eCLIP21.34■■□□□ 1.01
FDPS-201ENST00000356657 PNNQ9H307 717 aaKnown RBP21.34■■□□□ 1.01
FDPS-201ENST00000356657 USHBP1Q8N6Y0 703 aa21.33■■□□□ 1.01
FDPS-201ENST00000356657 EXOC5O00471 708 aa21.32■■□□□ 1
FDPS-201ENST00000356657 FCHSD2O94868 740 aa21.32■■□□□ 1
FDPS-201ENST00000356657 U2AF1L5P0DN76 240 aaPredicted RBP21.32■■□□□ 1
FDPS-201ENST00000356657 U2AF1Q01081 240 aaKnown RBP eCLIP21.32■■□□□ 1
FDPS-201ENST00000356657 WDR43Q15061 677 aaKnown RBP eCLIP21.32■■□□□ 13e-7■■■■□ 25.4
FDPS-201ENST00000356657 AMOTQ4VCS5 1084 aa21.32■■□□□ 1
FDPS-201ENST00000356657 CCER2I3L3R5 266 aa21.31■■□□□ 1
FDPS-201ENST00000356657 SHANK3Q9BYB0 1731 aa21.3■■□□□ 1
FDPS-201ENST00000356657 PDE3BQ13370 1112 aa21.3■■□□□ 1
FDPS-201ENST00000356657 KRT27Q7Z3Y8 459 aa21.3■■□□□ 1
FDPS-201ENST00000356657 MRS2Q9HD23 443 aa21.3■■□□□ 1
FDPS-201ENST00000356657 SPG7Q9UQ90 795 aa21.3■■□□□ 1
FDPS-201ENST00000356657 PCDH11XQ9BZA7 1347 aa21.29■■□□□ 1
FDPS-201ENST00000356657 PCDH11YQ9BZA8 1340 aa21.29■■□□□ 1
FDPS-201ENST00000356657 AEBP1Q8IUX7 1158 aa21.29■■□□□ 1
FDPS-201ENST00000356657 ZCRB1Q8TBF4 217 aaKnown RBP21.29■■□□□ 1
FDPS-201ENST00000356657 BCL9O00512 1426 aa21.28■■□□□ 1
FDPS-201ENST00000356657 NEFMP07197 916 aa21.28■■□□□ 1
FDPS-201ENST00000356657 PLEKHO1Q53GL0 409 aaPredicted RBP21.28■■□□□ 1
FDPS-201ENST00000356657 HMOX1P09601 288 aa21.27■■□□□ 1
FDPS-201ENST00000356657 RSPH6AQ9H0K4 717 aa21.27■■□□□ 1
FDPS-201ENST00000356657 EP400Q96L91 3159 aa21.26■□□□□ 0.99
FDPS-201ENST00000356657 PRKAR2BP31323 418 aa21.24■□□□□ 0.99
FDPS-201ENST00000356657 GAS2L2Q8NHY3 880 aa21.23■□□□□ 0.99
FDPS-201ENST00000356657 HSP90AB1P08238 724 aaKnown RBP21.22■□□□□ 0.99
FDPS-201ENST00000356657 FAM196AQ6ZSG2 479 aa21.22■□□□□ 0.99
FDPS-201ENST00000356657 PNISRQ8TF01 805 aaKnown RBP21.22■□□□□ 0.99
FDPS-201ENST00000356657 IFNL2Q8IZJ0 200 aa21.21■□□□□ 0.99
FDPS-201ENST00000356657 MAPK8IP3Q9UPT6 1336 aa21.21■□□□□ 0.99
FDPS-201ENST00000356657 SF3B2Q13435 895 aaKnown RBP21.2■□□□□ 0.98
FDPS-201ENST00000356657 FAM182BQ5T319 152 aa21.2■□□□□ 0.98
FDPS-201ENST00000356657 CCDC184Q52MB2 194 aa21.2■□□□□ 0.98
FDPS-201ENST00000356657 C1orf141Q5JVX7 400 aa21.2■□□□□ 0.98
FDPS-201ENST00000356657 MARCH10Q8NA82 808 aaPredicted RBP21.2■□□□□ 0.98
FDPS-201ENST00000356657 NKX1-1Q15270 411 aaPredicted RBP21.19■□□□□ 0.98
FDPS-201ENST00000356657 ZNF530Q6P9A1 599 aaPredicted RBP21.19■□□□□ 0.98
FDPS-201ENST00000356657 CCDC125Q86Z20 511 aa21.19■□□□□ 0.98
FDPS-201ENST00000356657 PLEKHF1Q96S99 279 aa21.19■□□□□ 0.98
FDPS-201ENST00000356657 ADAMTS8Q9UP79 889 aa21.19■□□□□ 0.98
FDPS-201ENST00000356657 SBF2Q86WG5 1849 aa21.18■□□□□ 0.98
FDPS-201ENST00000356657 CYP27B1O15528 508 aa21.18■□□□□ 0.98
FDPS-201ENST00000356657 PHKG2P15735 406 aa21.18■□□□□ 0.98
FDPS-201ENST00000356657 DDX54Q8TDD1 881 aaKnown RBP21.18■□□□□ 0.98
FDPS-201ENST00000356657 AKAP4Q5JQC9 854 aa21.17■□□□□ 0.98
FDPS-201ENST00000356657 MIER1Q8N108 512 aa21.17■□□□□ 0.98
FDPS-201ENST00000356657 RUNDC1Q96C34 613 aa21.17■□□□□ 0.98
FDPS-201ENST00000356657 NHSQ6T4R5 1651 aa21.16■□□□□ 0.98
FDPS-201ENST00000356657 KAT6BQ8WYB5 2073 aa21.16■□□□□ 0.98
FDPS-201ENST00000356657 SCN11AQ9UI33 1791 aa21.15■□□□□ 0.98
FDPS-201ENST00000356657 ADAMTS7Q9UKP4 1686 aa21.15■□□□□ 0.98
FDPS-201ENST00000356657 MTHFSDQ2M296 383 aaKnown RBP21.15■□□□□ 0.98
FDPS-201ENST00000356657 DCAF5Q96JK2 942 aa21.15■□□□□ 0.98
FDPS-201ENST00000356657 VIRMAQ69YN4 1812 aaKnown RBP21.15■□□□□ 0.98
FDPS-201ENST00000356657 DOT1LQ8TEK3 1739 aa21.15■□□□□ 0.98
FDPS-201ENST00000356657 MAP3K5Q99683 1374 aa21.14■□□□□ 0.98
FDPS-201ENST00000356657 PHACTR3Q96KR7 559 aa21.14■□□□□ 0.98
FDPS-201ENST00000356657 DLG5Q8TDM6 1919 aa21.14■□□□□ 0.97
FDPS-201ENST00000356657 HTATSF1O43719 755 aaKnown RBP21.13■□□□□ 0.97
FDPS-201ENST00000356657 GNAT3A8MTJ3 354 aa21.12■□□□□ 0.97
FDPS-201ENST00000356657 NFE2L2Q16236 605 aa21.12■□□□□ 0.97
FDPS-201ENST00000356657 TOGARAM1Q9Y4F4 1720 aa21.11■□□□□ 0.97
FDPS-201ENST00000356657 LMOD3Q0VAK6 560 aa21.11■□□□□ 0.97
FDPS-201ENST00000356657 NCBP3Q53F19 620 aaKnown RBP21.11■□□□□ 0.97
FDPS-201ENST00000356657 ITGB4P16144 1822 aa21.1■□□□□ 0.97
FDPS-201ENST00000356657 MRC1P22897 1456 aa21.09■□□□□ 0.97
FDPS-201ENST00000356657 ERVV-2B6SEH9 535 aa21.09■□□□□ 0.97
FDPS-201ENST00000356657 NGEFQ8N5V2 710 aa21.09■□□□□ 0.97
FDPS-201ENST00000356657 TNS1Q9HBL0 1735 aaKnown RBP21.09■□□□□ 0.97
FDPS-201ENST00000356657 RGPD3A6NKT7 1758 aaPredicted RBP21.09■□□□□ 0.97
FDPS-201ENST00000356657 RGPD4Q7Z3J3 1758 aa21.09■□□□□ 0.97
FDPS-201ENST00000356657 KDM6AO15550 1401 aaPredicted RBP21.08■□□□□ 0.97
FDPS-201ENST00000356657 RTF1Q92541 710 aaKnown RBP21.08■□□□□ 0.97
FDPS-201ENST00000356657 TRIM37O94972 964 aa21.07■□□□□ 0.96
FDPS-201ENST00000356657 BAG6P46379 1132 aa21.07■□□□□ 0.96
FDPS-201ENST00000356657 FAM9BQ8IZU0 186 aa21.07■□□□□ 0.96
FDPS-201ENST00000356657 BCL11BQ9C0K0 894 aaPredicted RBP21.07■□□□□ 0.96
FDPS-201ENST00000356657 TMPOP42166 694 aaKnown RBP21.07■□□□□ 0.96
FDPS-201ENST00000356657 DEFB132Q7Z7B7 95 aa21.07■□□□□ 0.96
FDPS-201ENST00000356657 CCDC146Q8IYE0 955 aa21.07■□□□□ 0.96
FDPS-201ENST00000356657 CEMIPQ8WUJ3 1361 aa21.06■□□□□ 0.96
FDPS-201ENST00000356657 BTAF1O14981 1849 aa21.06■□□□□ 0.96
FDPS-201ENST00000356657 RNMTO43148 476 aaKnown RBP21.04■□□□□ 0.96
FDPS-201ENST00000356657 MPRIPQ6WCQ1 1025 aa21.04■□□□□ 0.96
FDPS-201ENST00000356657 SIPA1L3O60292 1781 aaPredicted RBP21.04■□□□□ 0.96
FDPS-201ENST00000356657 RIPK4P57078 832 aa21.03■□□□□ 0.96
FDPS-201ENST00000356657 TMOD3Q9NYL9 352 aa21.03■□□□□ 0.96
FDPS-201ENST00000356657 APAF1O14727 1248 aa21.01■□□□□ 0.95
FDPS-201ENST00000356657 PRIM1P49642 420 aaKnown RBP21.01■□□□□ 0.95
FDPS-201ENST00000356657 CABP4P57796 275 aa21.01■□□□□ 0.95
FDPS-201ENST00000356657 TEFQ10587 303 aa21.01■□□□□ 0.95
FDPS-201ENST00000356657 CCDC27Q2M243 656 aa21.01■□□□□ 0.95
FDPS-201ENST00000356657 SYTL4Q96C24 671 aaPredicted RBP21.01■□□□□ 0.95
FDPS-201ENST00000356657 SLC52A2Q9HAB3 445 aa21.01■□□□□ 0.95
FDPS-201ENST00000356657 APBA3O96018 575 aa21.01■□□□□ 0.95
FDPS-201ENST00000356657 HMGB2P26583 209 aaKnown RBP21.01■□□□□ 0.95
FDPS-201ENST00000356657 ACSBG1Q96GR2 724 aa21.01■□□□□ 0.95
FDPS-201ENST00000356657 CALD1Q05682 793 aaKnown RBP21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 102.2 ms