RNA–Protein interactions for RNA: ENST00000355947.6

TRIM4-203, Transcript of tripartite motif containing 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRIM4, Length 3,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-203ENST00000355947 ZCCHC11Q5TAX3 1644 aaKnown RBP16.51■□□□□ 0.23
TRIM4-203ENST00000355947 IL16Q14005 1332 aa16.51■□□□□ 0.23
TRIM4-203ENST00000355947 ABCA6Q8N139 1617 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 CPA1P15085 419 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 CEP85Q6P2H3 762 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 NUTM1Q86Y26 1132 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 PODXL2Q9NZ53 605 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 VPS37CA5D8V6 355 aaPredicted RBP16.5■□□□□ 0.23
TRIM4-203ENST00000355947 MBD3O95983 291 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 USP48Q86UV5 1035 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 CNPY2Q9Y2B0 182 aa16.5■□□□□ 0.23
TRIM4-203ENST00000355947 HMMRO75330 724 aa16.49■□□□□ 0.23
TRIM4-203ENST00000355947 ADCY5O95622 1261 aa16.49■□□□□ 0.23
TRIM4-203ENST00000355947 FKBP5Q13451 457 aaPredicted RBP16.49■□□□□ 0.23
TRIM4-203ENST00000355947 GIMAP6Q6P9H5 292 aa16.49■□□□□ 0.23
TRIM4-203ENST00000355947 G2E3Q7L622 706 aa16.49■□□□□ 0.23
TRIM4-203ENST00000355947 FBXO31Q5XUX0 539 aaPredicted RBP16.48■□□□□ 0.23
TRIM4-203ENST00000355947 COG3Q96JB2 828 aa16.48■□□□□ 0.23
TRIM4-203ENST00000355947 IFT57Q9NWB7 429 aa16.48■□□□□ 0.23
TRIM4-203ENST00000355947 FANCAO15360 1455 aa16.48■□□□□ 0.23
TRIM4-203ENST00000355947 ANKRD44Q8N8A2 993 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 ADGRL1O94910 1474 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 OS9Q13438 667 aaPredicted RBP16.47■□□□□ 0.23
TRIM4-203ENST00000355947 FERMT3Q86UX7 667 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 CFAP44Q96MT7 982 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 MSH6P52701 1360 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 PDE1AP54750 535 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 PPP4R3BQ5MIZ7 849 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 ZNF592Q92610 1267 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 LTV1Q96GA3 475 aaPredicted RBP16.47■□□□□ 0.23
TRIM4-203ENST00000355947 MAP7D2Q96T17 732 aa16.47■□□□□ 0.23
TRIM4-203ENST00000355947 CAMK4Q16566 473 aa16.46■□□□□ 0.23
TRIM4-203ENST00000355947 SPHKAPQ2M3C7 1700 aa16.46■□□□□ 0.23
TRIM4-203ENST00000355947 ZNF500O60304 480 aaPredicted RBP16.46■□□□□ 0.23
TRIM4-203ENST00000355947 DYNC1I1O14576 645 aa16.46■□□□□ 0.22
TRIM4-203ENST00000355947 FOXO3O43524 673 aa16.46■□□□□ 0.22
TRIM4-203ENST00000355947 KCNJ4P48050 445 aa16.46■□□□□ 0.22
TRIM4-203ENST00000355947 TXNDC2Q86VQ3 553 aa16.45■□□□□ 0.22
TRIM4-203ENST00000355947 OSCARQ8IYS5 282 aa16.45■□□□□ 0.22
TRIM4-203ENST00000355947 RTF1Q92541 710 aaKnown RBP16.45■□□□□ 0.22
TRIM4-203ENST00000355947 TSPYL4Q9UJ04 414 aa16.45■□□□□ 0.22
TRIM4-203ENST00000355947 SHPRHQ149N8 1683 aa16.45■□□□□ 0.22
TRIM4-203ENST00000355947 LMOD3Q0VAK6 560 aa16.45■□□□□ 0.22
TRIM4-203ENST00000355947 FBXW7Q969H0 707 aa16.45■□□□□ 0.22
TRIM4-203ENST00000355947 ABCC4O15439 1325 aa16.45■□□□□ 0.22
TRIM4-203ENST00000355947 CHAF1AQ13111 956 aaPredicted RBP16.44■□□□□ 0.22
TRIM4-203ENST00000355947 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
TRIM4-203ENST00000355947 NOLC1Q14978 699 aaKnown RBP eCLIP16.44■□□□□ 0.22
TRIM4-203ENST00000355947 MAP3K4Q9Y6R4 1608 aa16.44■□□□□ 0.22
TRIM4-203ENST00000355947 FOSBP53539 338 aa16.44■□□□□ 0.22
TRIM4-203ENST00000355947 RPAP2Q8IXW5 612 aaPredicted RBP16.44■□□□□ 0.22
TRIM4-203ENST00000355947 ARHGAP45Q92619 1136 aa16.44■□□□□ 0.22
TRIM4-203ENST00000355947 SPG7Q9UQ90 795 aa16.43■□□□□ 0.22
TRIM4-203ENST00000355947 PHF14O94880 888 aa16.43■□□□□ 0.22
TRIM4-203ENST00000355947 UNC5CLQ8IV45 518 aa16.43■□□□□ 0.22
TRIM4-203ENST00000355947 PDLIM2Q96JY6 352 aa16.43■□□□□ 0.22
TRIM4-203ENST00000355947 STK31Q9BXU1 1019 aa16.43■□□□□ 0.22
TRIM4-203ENST00000355947 CYP2E1P05181 493 aaPredicted RBP16.43■□□□□ 0.22
TRIM4-203ENST00000355947 NSD2O96028 1365 aa16.42■□□□□ 0.22
TRIM4-203ENST00000355947 SBNO2Q9Y2G9 1366 aa16.42■□□□□ 0.22
TRIM4-203ENST00000355947 NPHP1O15259 732 aa16.42■□□□□ 0.22
TRIM4-203ENST00000355947 C14orf37Q86TY3 774 aa16.42■□□□□ 0.22
TRIM4-203ENST00000355947 EIF2S2P20042 333 aaKnown RBP16.42■□□□□ 0.22
TRIM4-203ENST00000355947 MX1P20591 662 aa16.42■□□□□ 0.22
TRIM4-203ENST00000355947 FAM173BQ6P4H8 233 aa16.42■□□□□ 0.22
TRIM4-203ENST00000355947 CWC27Q6UX04 472 aaKnown RBP16.42■□□□□ 0.22
TRIM4-203ENST00000355947 ESYT1Q9BSJ8 1104 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 SMC3Q9UQE7 1217 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 ASXL2Q76L83 1435 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 CCDC83Q8IWF9 413 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 LRRCC1Q9C099 1032 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 KIF3AQ9Y496 699 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 NUTM2GQ5VZR2 741 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 TCEANC2Q96MN5 208 aa16.41■□□□□ 0.22
TRIM4-203ENST00000355947 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
TRIM4-203ENST00000355947 SURF6O75683 361 aaKnown RBP16.4■□□□□ 0.22
TRIM4-203ENST00000355947 CKAP2LQ8IYA6 745 aa16.4■□□□□ 0.22
TRIM4-203ENST00000355947 SRCIN1Q9C0H9 1055 aa16.4■□□□□ 0.22
TRIM4-203ENST00000355947 ABCC1P33527 1531 aa16.4■□□□□ 0.22
TRIM4-203ENST00000355947 HS1BP3Q53T59 392 aa16.4■□□□□ 0.22
TRIM4-203ENST00000355947 PNMA6EA0A0J9YXQ4 647 aa16.4■□□□□ 0.22
TRIM4-203ENST00000355947 NPATQ14207 1427 aa16.39■□□□□ 0.21
TRIM4-203ENST00000355947 LRRFIP2Q9Y608 721 aaKnown RBP16.39■□□□□ 0.21
TRIM4-203ENST00000355947 UHRF1BP1LA0JNW5 1464 aa16.39■□□□□ 0.21
TRIM4-203ENST00000355947 ATP7AQ04656 1500 aa16.39■□□□□ 0.21
TRIM4-203ENST00000355947 BRD1O95696 1058 aa16.39■□□□□ 0.21
TRIM4-203ENST00000355947 GNAI2P04899 355 aa16.39■□□□□ 0.21
TRIM4-203ENST00000355947 C16orf45Q96MC5 204 aaPredicted RBP16.39■□□□□ 0.21
TRIM4-203ENST00000355947 U2AF2P26368 475 aaKnown RBP eCLIP16.38■□□□□ 0.21
TRIM4-203ENST00000355947 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
TRIM4-203ENST00000355947 PPFIA3O75145 1194 aa16.38■□□□□ 0.21
TRIM4-203ENST00000355947 HSP90AB2PQ58FF8 381 aa16.38■□□□□ 0.21
TRIM4-203ENST00000355947 NECAB1Q8N987 351 aa16.38■□□□□ 0.21
TRIM4-203ENST00000355947 IL13P35225 146 aa16.38■□□□□ 0.21
TRIM4-203ENST00000355947 PDCL2Q8N4E4 241 aa16.38■□□□□ 0.21
TRIM4-203ENST00000355947 WDR33Q9C0J8 1336 aaKnown RBP16.38■□□□□ 0.21
TRIM4-203ENST00000355947 DNM1Q05193 864 aaKnown RBP16.37■□□□□ 0.21
TRIM4-203ENST00000355947 ZNF771Q7L3S4 317 aaPredicted RBP16.37■□□□□ 0.21
TRIM4-203ENST00000355947 NAP1L2Q9ULW6 460 aaPredicted RBP16.37■□□□□ 0.21
TRIM4-203ENST00000355947 IBTKQ9P2D0 1353 aaPredicted RBP16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms