RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CTNNA3Q9UI47 895 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 SPA17Q15506 151 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 UQCRHLA0A096LP55 91 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 UQCRHP07919 91 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 CCT4P50991 539 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 TSG101Q99816 390 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 SLC4A2P04920 1241 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 CFAP100Q494V2 611 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 FERMT2Q96AC1 680 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 SHTN1A0MZ66 631 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 TMCO3Q6UWJ1 677 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 MTHFSP49914 203 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 BAZ1AQ9NRL2 1556 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 ERICH4A6NGS2 130 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 K7ELQ4 463 aaPredicted RBP6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 VPS36Q86VN1 386 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 IGHMBP2P38935 993 aaKnown RBP6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
SRGAP1-201ENST00000355086 NACADO15069 1562 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 GCOM1H8Y6P7 765 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 MYZAPP0CAP1 466 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 SRCIN1Q9C0H9 1055 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 UBA5Q9GZZ9 404 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 PABPN1LA6NDY0 278 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 FGFR1OPO95684 399 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 UBXN4Q92575 508 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 NUP62CLQ9H1M0 184 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 CTNNA2P26232 953 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 MACROD2A1Z1Q3 448 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 ANKRD18BA2A2Z9 1011 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 KRT32Q14532 448 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 AACSQ86V21 672 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 CNTLNQ9NXG0 1405 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 TWISTNBQ3B726 338 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 LARP1Q6PKG0 1096 aaKnown RBP6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 CACNA2D4Q7Z3S7 1137 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 GBP3Q9H0R5 595 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 POLR3DP05423 398 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 FAM69CQ0P6D2 419 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 PAXIP1Q6ZW49 1069 aaPredicted RBP6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 CASQ1P31415 396 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 FKBP15Q5T1M5 1219 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 PDRG1Q9NUG6 133 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 WDR70Q9NW82 654 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 SPG7Q9UQ90 795 aa6.75□□□□□ -1.33
SRGAP1-201ENST00000355086 GIGYF2Q6Y7W6 1299 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 LUZP1Q86V48 1076 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 TTLL12Q14166 644 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 CWC27Q6UX04 472 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 FERP16591 822 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 SMC1AQ14683 1233 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 ABCF2Q9UG63 623 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 JAKMIP1Q96N16 626 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 MKNK2Q9HBH9 465 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 KLHL10Q6JEL2 608 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 PNISRQ8TF01 805 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 PUS7Q96PZ0 661 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 MCM3P25205 808 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 SPATA24Q86W54 205 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 CEP126Q9P2H0 1117 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 IDH1O75874 414 aaKnown RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 WDR78Q5VTH9 848 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 SSX2IPQ9Y2D8 614 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 KIF5CO60282 957 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 PRKAR2BP31323 418 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 AIDAQ96BJ3 306 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 PDZRN3Q9UPQ7 1066 aa6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 ZSCAN31Q96LW9 406 aaPredicted RBP6.74□□□□□ -1.33
SRGAP1-201ENST00000355086 TMEM132EQ6IEE7 984 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 CRACR2BQ8N4Y2 399 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 MAP3K11Q16584 847 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 SULT6B1Q6IMI4 303 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 CFAP57Q96MR6 1250 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 BICDL1Q6ZP65 573 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 DDX11Q96FC9 970 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 RAB34Q9BZG1 259 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 PAFAH1B1P43034 410 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 RNF187Q5TA31 235 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 TAOK3Q9H2K8 898 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 HMGB2P26583 209 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 EHMT1Q9H9B1 1298 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 RRBP1Q9P2E9 1410 aaKnown RBP6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 DNA2P51530 1060 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 TICAM2Q86XR7 235 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 CUL5Q93034 780 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 ZNF530Q6P9A1 599 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 PROSER2Q86WR7 435 aaPredicted RBP6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 STARD3NLO95772 234 aa6.73□□□□□ -1.33
SRGAP1-201ENST00000355086 FSD2A1L4K1 749 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 TNNT1P13805 278 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 TSNARE1Q96NA8 513 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 MINDY4BA8MYZ0 360 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 METTL24Q5JXM2 366 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 USO1O60763 962 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 CETN1Q12798 172 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 ADAMTS8Q9UP79 889 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 CASTP20810 708 aaKnown RBP6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 ZNF652Q9Y2D9 606 aa6.72□□□□□ -1.33
SRGAP1-201ENST00000355086 CAVIN4Q5BKX8 364 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms