RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 REC8O95072 547 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 MX1P20591 662 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 SPC24Q8NBT2 197 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 PTCH1Q13635 1447 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 CARMIL2Q6F5E8 1435 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 UHRF1BP1LA0JNW5 1464 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 TULP2O00295 520 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 U2SURPO15042 1029 aaKnown RBP9.48□□□□□ -0.89
CD46-203ENST00000354848 CAPN2P17655 700 aa9.48□□□□□ -0.89
CD46-203ENST00000354848 INO80Q9ULG1 1556 aaPredicted RBP9.48□□□□□ -0.89
CD46-203ENST00000354848 SMTNL1A8MU46 457 aa9.47□□□□□ -0.89
CD46-203ENST00000354848 OTUD7AQ8TE49 926 aaPredicted RBP9.47□□□□□ -0.89
CD46-203ENST00000354848 KRT222Q8N1A0 295 aa9.47□□□□□ -0.89
CD46-203ENST00000354848 ARHGAP45Q92619 1136 aa9.47□□□□□ -0.89
CD46-203ENST00000354848 DCTPP1Q9H773 170 aa9.47□□□□□ -0.89
CD46-203ENST00000354848 MYOM2P54296 1465 aa9.47□□□□□ -0.89
CD46-203ENST00000354848 MCM2P49736 904 aa9.46□□□□□ -0.89
CD46-203ENST00000354848 PAXIP1Q6ZW49 1069 aaPredicted RBP9.46□□□□□ -0.89
CD46-203ENST00000354848 INTS4Q96HW7 963 aaKnown RBP9.46□□□□□ -0.89
CD46-203ENST00000354848 FUCA2Q9BTY2 467 aa9.46□□□□□ -0.89
CD46-203ENST00000354848 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.89
CD46-203ENST00000354848 ZC3H13Q5T200 1668 aaKnown RBP9.46□□□□□ -0.89
CD46-203ENST00000354848 ERICH4A6NGS2 130 aa9.46□□□□□ -0.89
CD46-203ENST00000354848 GOLGA6L6A8MZA4 724 aa9.46□□□□□ -0.89
CD46-203ENST00000354848 ERC2O15083 957 aa9.46□□□□□ -0.89
CD46-203ENST00000354848 VGFO15240 615 aaPredicted RBP9.46□□□□□ -0.89
CD46-203ENST00000354848 MRPL50Q8N5N7 158 aaKnown RBP9.46□□□□□ -0.89
CD46-203ENST00000354848 TMEM87AQ8NBN3 555 aa9.46□□□□□ -0.89
CD46-203ENST00000354848 C16orf45Q96MC5 204 aaPredicted RBP9.46□□□□□ -0.89
CD46-203ENST00000354848 ARHGAP5Q13017 1502 aa9.46□□□□□ -0.9
CD46-203ENST00000354848 ABCC4O15439 1325 aa9.46□□□□□ -0.9
CD46-203ENST00000354848 ADGRF5Q8IZF2 1346 aa9.46□□□□□ -0.9
CD46-203ENST00000354848 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
CD46-203ENST00000354848 ZNF428Q96B54 188 aa9.46□□□□□ -0.9
CD46-203ENST00000354848 SPAG9O60271 1321 aaKnown RBP9.45□□□□□ -0.9
CD46-203ENST00000354848 NOL8Q76FK4 1167 aaKnown RBP9.45□□□□□ -0.9
CD46-203ENST00000354848 QRICH2Q9H0J4 1663 aa9.45□□□□□ -0.9
CD46-203ENST00000354848 PTGS1P23219 599 aa9.45□□□□□ -0.9
CD46-203ENST00000354848 ATAD2Q6PL18 1390 aa9.45□□□□□ -0.9
CD46-203ENST00000354848 WDR33Q9C0J8 1336 aaKnown RBP9.45□□□□□ -0.9
CD46-203ENST00000354848 CHMP4AQ9BY43 222 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 FAM53CQ9NYF3 392 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 CNPY2Q9Y2B0 182 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 VAMP4O75379 141 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 TNNT1P13805 278 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 GIMAP6Q6P9H5 292 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 SRCIN1Q9C0H9 1055 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 RPAP1Q9BWH6 1393 aaPredicted RBP9.44□□□□□ -0.9
CD46-203ENST00000354848 KMT5BQ4FZB7 885 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 CCDC112Q8NEF3 446 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 PAXBP1Q9Y5B6 917 aa9.44□□□□□ -0.9
CD46-203ENST00000354848 COL3A1P02461 1466 aaPredicted RBP9.44□□□□□ -0.9
CD46-203ENST00000354848 TRIM6-TRIM34B2RNG4 842 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 UBE2HP62256 183 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 TRIM34Q9BYJ4 488 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 NSD2O96028 1365 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 IFT172Q9UG01 1749 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 ZNF397Q8NF99 534 aaPredicted RBP9.43□□□□□ -0.9
CD46-203ENST00000354848 JPH4Q96JJ6 628 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 IFT57Q9NWB7 429 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 RTL1A6NKG5 1358 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 LRMPQ12912 555 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 TSPYL6Q8N831 410 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 PALD1Q9ULE6 856 aa9.43□□□□□ -0.9
CD46-203ENST00000354848 FAM193AP78312 1265 aa9.42□□□□□ -0.9
CD46-203ENST00000354848 ST7Q9NRC1 585 aa9.42□□□□□ -0.9
CD46-203ENST00000354848 NEURL4Q96JN8 1562 aa9.42□□□□□ -0.9
CD46-203ENST00000354848 RBM6P78332 1123 aaKnown RBP9.42□□□□□ -0.9
CD46-203ENST00000354848 IRX3P78415 501 aaPredicted RBP9.42□□□□□ -0.9
CD46-203ENST00000354848 CCDC186Q7Z3E2 898 aa9.42□□□□□ -0.9
CD46-203ENST00000354848 TSPYL1Q9H0U9 437 aa9.42□□□□□ -0.9
CD46-203ENST00000354848 TRERF1Q96PN7 1200 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 TRAK1Q9UPV9 953 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 RGS12O14924 1447 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 KIF1BO60333 1816 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 APBB1O00213 710 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 KLHL34Q8N239 644 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 ATP10DQ9P241 1426 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 ELL2O00472 640 aaPredicted RBP9.41□□□□□ -0.9
CD46-203ENST00000354848 CERS3Q8IU89 383 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 CREBRFQ8IUR6 639 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 ANKRD44Q8N8A2 993 aa9.41□□□□□ -0.9
CD46-203ENST00000354848 FEZ2Q9UHY8 353 aaPredicted RBP9.41□□□□□ -0.9
CD46-203ENST00000354848 TET3O43151 1660 aa9.4□□□□□ -0.9
CD46-203ENST00000354848 CYP2C19P33261 490 aa9.4□□□□□ -0.9
CD46-203ENST00000354848 HNRNPH2P55795 449 aaKnown RBP9.4□□□□□ -0.9
CD46-203ENST00000354848 FBXO38Q6PIJ6 1188 aa9.4□□□□□ -0.9
CD46-203ENST00000354848 FIBPO43427 364 aa9.4□□□□□ -0.91
CD46-203ENST00000354848 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.4□□□□□ -0.91
CD46-203ENST00000354848 NRBP1Q9UHY1 535 aa9.4□□□□□ -0.91
CD46-203ENST00000354848 V9GYY5 206 aaPredicted RBP9.4□□□□□ -0.91
CD46-203ENST00000354848 ARHGEF40Q8TER5 1519 aa9.4□□□□□ -0.91
CD46-203ENST00000354848 UGGT1Q9NYU2 1555 aa9.4□□□□□ -0.91
CD46-203ENST00000354848 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.39□□□□□ -0.911e-6■□□□□ 10.9
CD46-203ENST00000354848 CCDC192P0DO97 292 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 ZSCAN22P10073 491 aaPredicted RBP9.39□□□□□ -0.91
CD46-203ENST00000354848 ANAPC15P60006 121 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 TPD52L1Q16890 204 aaPredicted RBP9.39□□□□□ -0.91
CD46-203ENST00000354848 ZSCAN25Q6NSZ9 544 aa9.39□□□□□ -0.91
CD46-203ENST00000354848 AEBP2Q6ZN18 517 aaPredicted RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms