RNA–Protein interactions for RNA: ENST00000352131.7

RFC2-202, Transcript of replication factor C subunit 2, humanhuman

TSL 1 (best) BASIC

Gene RFC2, Length 1,576 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC2-202ENST00000352131 PLEKHG2Q9H7P9 1386 aa26.62■■□□□ 1.85
RFC2-202ENST00000352131 EP400Q96L91 3159 aa26.62■■□□□ 1.85
RFC2-202ENST00000352131 SHANK3Q9BYB0 1731 aa26.61■■□□□ 1.85
RFC2-202ENST00000352131 SOCS7O14512 581 aa26.61■■□□□ 1.85
RFC2-202ENST00000352131 FAM196AQ6ZSG2 479 aa26.6■■□□□ 1.85
RFC2-202ENST00000352131 PKD1L3Q7Z443 1732 aa26.6■■□□□ 1.85
RFC2-202ENST00000352131 U2SURPO15042 1029 aaKnown RBP26.59■■□□□ 1.85
RFC2-202ENST00000352131 NUDCQ9Y266 331 aa26.59■■□□□ 1.85
RFC2-202ENST00000352131 BCL9O00512 1426 aa26.59■■□□□ 1.85
RFC2-202ENST00000352131 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.58■■□□□ 1.85
RFC2-202ENST00000352131 ANP32CO43423 234 aa26.58■■□□□ 1.85
RFC2-202ENST00000352131 HMOX1P09601 288 aa26.58■■□□□ 1.85
RFC2-202ENST00000352131 UPF1Q92900 1129 aaKnown RBP eCLIP26.57■■□□□ 1.84
RFC2-202ENST00000352131 DDX54Q8TDD1 881 aaKnown RBP26.56■■□□□ 1.84
RFC2-202ENST00000352131 SPG7Q9UQ90 795 aa26.54■■□□□ 1.84
RFC2-202ENST00000352131 PCDH11XQ9BZA7 1347 aa26.54■■□□□ 1.84
RFC2-202ENST00000352131 PCDH11YQ9BZA8 1340 aa26.54■■□□□ 1.84
RFC2-202ENST00000352131 CYP27B1O15528 508 aa26.53■■□□□ 1.84
RFC2-202ENST00000352131 U2AF1L5P0DN76 240 aaPredicted RBP26.52■■□□□ 1.84
RFC2-202ENST00000352131 U2AF1Q01081 240 aaKnown RBP eCLIP26.52■■□□□ 1.84
RFC2-202ENST00000352131 AMOTQ4VCS5 1084 aa26.51■■□□□ 1.83
RFC2-202ENST00000352131 PLEKHO1Q53GL0 409 aaPredicted RBP26.51■■□□□ 1.83
RFC2-202ENST00000352131 RSPH6AQ9H0K4 717 aa26.51■■□□□ 1.83
RFC2-202ENST00000352131 SBF2Q86WG5 1849 aa26.5■■□□□ 1.83
RFC2-202ENST00000352131 CCDC125Q86Z20 511 aa26.5■■□□□ 1.83
RFC2-202ENST00000352131 FCHSD2O94868 740 aa26.48■■□□□ 1.83
RFC2-202ENST00000352131 TRIM37O94972 964 aa26.47■■□□□ 1.83
RFC2-202ENST00000352131 PHKG2P15735 406 aa26.46■■□□□ 1.83
RFC2-202ENST00000352131 NKX1-1Q15270 411 aaPredicted RBP26.46■■□□□ 1.83
RFC2-202ENST00000352131 IFNL2Q8IZJ0 200 aa26.46■■□□□ 1.83
RFC2-202ENST00000352131 PRKAR2BP31323 418 aa26.46■■□□□ 1.83
RFC2-202ENST00000352131 CCDC184Q52MB2 194 aa26.45■■□□□ 1.82
RFC2-202ENST00000352131 ZNF530Q6P9A1 599 aaPredicted RBP26.45■■□□□ 1.82
RFC2-202ENST00000352131 TNS1Q9HBL0 1735 aaKnown RBP26.44■■□□□ 1.82
RFC2-202ENST00000352131 MTHFSDQ2M296 383 aaKnown RBP26.43■■□□□ 1.82
RFC2-202ENST00000352131 PTF1AQ7RTS3 328 aa26.43■■□□□ 1.82
RFC2-202ENST00000352131 BCL11BQ9C0K0 894 aaPredicted RBP26.43■■□□□ 1.82
RFC2-202ENST00000352131 NHSQ6T4R5 1651 aa26.43■■□□□ 1.82
RFC2-202ENST00000352131 KCNQ2O43526 872 aa26.42■■□□□ 1.82
RFC2-202ENST00000352131 ACSBG1Q96GR2 724 aa26.42■■□□□ 1.82
RFC2-202ENST00000352131 PHACTR3Q96KR7 559 aa26.42■■□□□ 1.82
RFC2-202ENST00000352131 PLEKHF1Q96S99 279 aa26.41■■□□□ 1.82
RFC2-202ENST00000352131 DOT1LQ8TEK3 1739 aa26.4■■□□□ 1.82
RFC2-202ENST00000352131 SF3B2Q13435 895 aaKnown RBP26.4■■□□□ 1.82
RFC2-202ENST00000352131 C1orf141Q5JVX7 400 aa26.39■■□□□ 1.82
RFC2-202ENST00000352131 TOGARAM1Q9Y4F4 1720 aa26.39■■□□□ 1.81
RFC2-202ENST00000352131 PRIM1P49642 420 aaKnown RBP26.38■■□□□ 1.81
RFC2-202ENST00000352131 AKAP4Q5JQC9 854 aa26.38■■□□□ 1.81
RFC2-202ENST00000352131 KAT6BQ8WYB5 2073 aa26.38■■□□□ 1.81
RFC2-202ENST00000352131 HSP90AB1P08238 724 aaKnown RBP26.37■■□□□ 1.81
RFC2-202ENST00000352131 WDR43Q15061 677 aaKnown RBP eCLIP26.37■■□□□ 1.81
RFC2-202ENST00000352131 DIEXFQ68CQ4 756 aaKnown RBP26.37■■□□□ 1.81
RFC2-202ENST00000352131 GAS2L2Q8NHY3 880 aa26.37■■□□□ 1.81
RFC2-202ENST00000352131 DCAF5Q96JK2 942 aa26.37■■□□□ 1.81
RFC2-202ENST00000352131 APBA3O96018 575 aa26.36■■□□□ 1.81
RFC2-202ENST00000352131 PNNQ9H307 717 aaKnown RBP26.36■■□□□ 1.81
RFC2-202ENST00000352131 ADAMTS8Q9UP79 889 aa26.36■■□□□ 1.81
RFC2-202ENST00000352131 KDM6AO15550 1401 aaPredicted RBP26.36■■□□□ 1.81
RFC2-202ENST00000352131 DEFB132Q7Z7B7 95 aa26.35■■□□□ 1.81
RFC2-202ENST00000352131 MRS2Q9HD23 443 aa26.35■■□□□ 1.81
RFC2-202ENST00000352131 BAG6P46379 1132 aa26.33■■□□□ 1.81
RFC2-202ENST00000352131 SYTL4Q96C24 671 aaPredicted RBP26.33■■□□□ 1.81
RFC2-202ENST00000352131 BTAF1O14981 1849 aa26.33■■□□□ 1.81
RFC2-202ENST00000352131 MPRIPQ6WCQ1 1025 aa26.33■■□□□ 1.8
RFC2-202ENST00000352131 PNISRQ8TF01 805 aaKnown RBP26.33■■□□□ 1.8
RFC2-202ENST00000352131 ITGB4P16144 1822 aa26.32■■□□□ 1.8
RFC2-202ENST00000352131 ERVV-2B6SEH9 535 aa26.31■■□□□ 1.8
RFC2-202ENST00000352131 PLSCR1O15162 318 aa26.31■■□□□ 1.8
RFC2-202ENST00000352131 ADAMTS7Q9UKP4 1686 aa26.31■■□□□ 1.8
RFC2-202ENST00000352131 MAP3K5Q99683 1374 aa26.3■■□□□ 1.8
RFC2-202ENST00000352131 EN1Q05925 392 aaPredicted RBP26.3■■□□□ 1.8
RFC2-202ENST00000352131 CAMKK2Q96RR4 588 aa26.3■■□□□ 1.8
RFC2-202ENST00000352131 SCN11AQ9UI33 1791 aa26.3■■□□□ 1.8
RFC2-202ENST00000352131 GNAT3A8MTJ3 354 aa26.29■■□□□ 1.8
RFC2-202ENST00000352131 NEFMP07197 916 aa26.29■■□□□ 1.8
RFC2-202ENST00000352131 RNMTO43148 476 aaKnown RBP26.29■■□□□ 1.8
RFC2-202ENST00000352131 PIGBQ92521 554 aa26.29■■□□□ 1.8
RFC2-202ENST00000352131 LGR6Q9HBX8 967 aa26.29■■□□□ 1.8
RFC2-202ENST00000352131 RGPD3A6NKT7 1758 aaPredicted RBP26.28■■□□□ 1.8
RFC2-202ENST00000352131 RGPD4Q7Z3J3 1758 aa26.28■■□□□ 1.8
RFC2-202ENST00000352131 MAPK8IP3Q9UPT6 1336 aa26.27■■□□□ 1.8
RFC2-202ENST00000352131 EZH2Q15910 746 aaKnown RBP26.26■■□□□ 1.79
RFC2-202ENST00000352131 NFE2L2Q16236 605 aa26.26■■□□□ 1.79
RFC2-202ENST00000352131 CCDC146Q8IYE0 955 aa26.26■■□□□ 1.79
RFC2-202ENST00000352131 RUNDC1Q96C34 613 aa26.26■■□□□ 1.79
RFC2-202ENST00000352131 TMOD3Q9NYL9 352 aa26.26■■□□□ 1.79
RFC2-202ENST00000352131 VIRMAQ69YN4 1812 aaKnown RBP26.26■■□□□ 1.79
RFC2-202ENST00000352131 IL17REQ8NFR9 667 aa26.25■■□□□ 1.79
RFC2-202ENST00000352131 MRC1P22897 1456 aa26.25■■□□□ 1.79
RFC2-202ENST00000352131 CABP4P57796 275 aa26.24■■□□□ 1.79
RFC2-202ENST00000352131 HTATSF1O43719 755 aaKnown RBP26.23■■□□□ 1.79
RFC2-202ENST00000352131 CEMIPQ8WUJ3 1361 aa26.23■■□□□ 1.79
RFC2-202ENST00000352131 CCER2I3L3R5 266 aa26.22■■□□□ 1.79
RFC2-202ENST00000352131 PROM2Q8N271 834 aa26.22■■□□□ 1.79
RFC2-202ENST00000352131 NFATC2IPQ8NCF5 419 aa26.22■■□□□ 1.79
RFC2-202ENST00000352131 SLC52A2Q9HAB3 445 aa26.22■■□□□ 1.79
RFC2-202ENST00000352131 DLG5Q8TDM6 1919 aa26.22■■□□□ 1.79
RFC2-202ENST00000352131 TMPOP42166 694 aaKnown RBP26.2■■□□□ 1.79
RFC2-202ENST00000352131 RREB1Q92766 1687 aa26.2■■□□□ 1.78
RFC2-202ENST00000352131 MIER1Q8N108 512 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms