RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CSB-PGBD3P0DP91 1061 aa17.24■□□□□ 0.35
UBA3-201ENST00000349511 MS4A1P11836 297 aa17.24■□□□□ 0.35
UBA3-201ENST00000349511 RARSP54136 660 aaKnown RBP17.24■□□□□ 0.35
UBA3-201ENST00000349511 RTF1Q92541 710 aaKnown RBP17.24■□□□□ 0.35
UBA3-201ENST00000349511 MBIPQ9NS73 344 aa17.24■□□□□ 0.35
UBA3-201ENST00000349511 NLRP2Q9NX02 1062 aa17.24■□□□□ 0.35
UBA3-201ENST00000349511 NHSL1Q5SYE7 1610 aa17.23■□□□□ 0.35
UBA3-201ENST00000349511 CRYBG1Q9Y4K1 1723 aa17.23■□□□□ 0.35
UBA3-201ENST00000349511 GAS2L2Q8NHY3 880 aa17.23■□□□□ 0.35
UBA3-201ENST00000349511 FRAT1Q92837 279 aaPredicted RBP17.23■□□□□ 0.35
UBA3-201ENST00000349511 PRDM11Q9NQV5 511 aa17.23■□□□□ 0.35
UBA3-201ENST00000349511 MIS18AQ9NYP9 233 aa17.23■□□□□ 0.35
UBA3-201ENST00000349511 DEKP35659 375 aaKnown RBP17.23■□□□□ 0.35
UBA3-201ENST00000349511 CALD1Q05682 793 aaKnown RBP17.22■□□□□ 0.35
UBA3-201ENST00000349511 BACH2Q9BYV9 841 aa17.22■□□□□ 0.35
UBA3-201ENST00000349511 GNAI1P63096 354 aa17.21■□□□□ 0.35
UBA3-201ENST00000349511 NPM2Q86SE8 214 aaKnown RBP17.21■□□□□ 0.35
UBA3-201ENST00000349511 CFAP44Q96MT7 982 aa17.21■□□□□ 0.35
UBA3-201ENST00000349511 IFT57Q9NWB7 429 aa17.21■□□□□ 0.35
UBA3-201ENST00000349511 GNAT3A8MTJ3 354 aa17.2■□□□□ 0.34
UBA3-201ENST00000349511 ZNF853P0CG23 659 aa17.2■□□□□ 0.34
UBA3-201ENST00000349511 CANXP27824 592 aaKnown RBP17.2■□□□□ 0.34
UBA3-201ENST00000349511 TSPYL6Q8N831 410 aa17.2■□□□□ 0.34
UBA3-201ENST00000349511 COL18A1P39060 1754 aa17.2■□□□□ 0.34
UBA3-201ENST00000349511 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.19■□□□□ 0.34
UBA3-201ENST00000349511 KRT24Q2M2I5 525 aa17.18■□□□□ 0.34
UBA3-201ENST00000349511 TNNQ9UQP3 1299 aa17.18■□□□□ 0.34
UBA3-201ENST00000349511 CPDO75976 1380 aa17.18■□□□□ 0.34
UBA3-201ENST00000349511 IL17REQ8NFR9 667 aa17.18■□□□□ 0.34
UBA3-201ENST00000349511 C8orf58Q8NAV2 365 aa17.17■□□□□ 0.34
UBA3-201ENST00000349511 SSH1Q8WYL5 1049 aa17.17■□□□□ 0.34
UBA3-201ENST00000349511 STRN4Q9NRL3 753 aa17.17■□□□□ 0.34
UBA3-201ENST00000349511 SMC4Q9NTJ3 1288 aa17.17■□□□□ 0.34
UBA3-201ENST00000349511 TOM1O60784 492 aa17.17■□□□□ 0.34
UBA3-201ENST00000349511 ZNF530Q6P9A1 599 aaPredicted RBP17.17■□□□□ 0.34
UBA3-201ENST00000349511 UBAP1LF5GYI3 381 aa17.16■□□□□ 0.34
UBA3-201ENST00000349511 LGR6Q9HBX8 967 aa17.16■□□□□ 0.34
UBA3-201ENST00000349511 MAP3K5Q99683 1374 aa17.16■□□□□ 0.34
UBA3-201ENST00000349511 CRB1P82279 1406 aa17.16■□□□□ 0.34
UBA3-201ENST00000349511 PLEKHO1Q53GL0 409 aaPredicted RBP17.15■□□□□ 0.34
UBA3-201ENST00000349511 SKAP1Q86WV1 359 aa17.15■□□□□ 0.34
UBA3-201ENST00000349511 CLUAP1Q96AJ1 413 aa17.15■□□□□ 0.34
UBA3-201ENST00000349511 CAMTA1Q9Y6Y1 1673 aa17.15■□□□□ 0.34
UBA3-201ENST00000349511 ABCA3Q99758 1704 aa17.15■□□□□ 0.34
UBA3-201ENST00000349511 CHL1O00533 1208 aa17.15■□□□□ 0.34
UBA3-201ENST00000349511 MPRIPQ6WCQ1 1025 aa17.15■□□□□ 0.34
UBA3-201ENST00000349511 PANK1Q8TE04 598 aa17.15■□□□□ 0.34
UBA3-201ENST00000349511 VAMP4O75379 141 aa17.14■□□□□ 0.33
UBA3-201ENST00000349511 TOM1L2Q6ZVM7 507 aa17.14■□□□□ 0.33
UBA3-201ENST00000349511 RAPGEF4Q8WZA2 1011 aa17.14■□□□□ 0.33
UBA3-201ENST00000349511 TSPYL4Q9UJ04 414 aa17.14■□□□□ 0.33
UBA3-201ENST00000349511 TWISTNBQ3B726 338 aaPredicted RBP17.14■□□□□ 0.33
UBA3-201ENST00000349511 CT47B1P0C2W7 299 aaPredicted RBP17.13■□□□□ 0.33
UBA3-201ENST00000349511 USP35Q9P2H5 1018 aa17.13■□□□□ 0.33
UBA3-201ENST00000349511 NCAPD2Q15021 1401 aa17.13■□□□□ 0.33
UBA3-201ENST00000349511 KDM2BQ8NHM5 1336 aa17.12■□□□□ 0.33
UBA3-201ENST00000349511 EVA1CP58658 441 aa17.12■□□□□ 0.33
UBA3-201ENST00000349511 HTATSF1O43719 755 aaKnown RBP17.12■□□□□ 0.33
UBA3-201ENST00000349511 AMOTQ4VCS5 1084 aa17.12■□□□□ 0.33
UBA3-201ENST00000349511 C1orf141Q5JVX7 400 aa17.12■□□□□ 0.33
UBA3-201ENST00000349511 COG6Q9Y2V7 657 aa17.12■□□□□ 0.33
UBA3-201ENST00000349511 AHDC1Q5TGY3 1603 aaPredicted RBP17.11■□□□□ 0.33
UBA3-201ENST00000349511 TATP17735 454 aaPredicted RBP17.11■□□□□ 0.33
UBA3-201ENST00000349511 LARP1Q6PKG0 1096 aaKnown RBP17.11■□□□□ 0.33
UBA3-201ENST00000349511 NOB1Q9ULX3 412 aaKnown RBP17.11■□□□□ 0.33
UBA3-201ENST00000349511 ADAMTS2O95450 1211 aa17.11■□□□□ 0.33
UBA3-201ENST00000349511 RLBP1P12271 317 aa17.11■□□□□ 0.33
UBA3-201ENST00000349511 RTL5Q5HYW3 569 aaPredicted RBP17.11■□□□□ 0.33
UBA3-201ENST00000349511 AKAP4Q5JQC9 854 aa17.11■□□□□ 0.33
UBA3-201ENST00000349511 BTG4Q9NY30 223 aa17.11■□□□□ 0.33
UBA3-201ENST00000349511 MEGF6O75095 1541 aa17.11■□□□□ 0.33
UBA3-201ENST00000349511 PHLPP1O60346 1717 aa17.11■□□□□ 0.33
UBA3-201ENST00000349511 WDR17Q8IZU2 1322 aa17.1■□□□□ 0.33
UBA3-201ENST00000349511 LMO7Q8WWI1 1683 aa17.09■□□□□ 0.33
UBA3-201ENST00000349511 FAM208AQ9UK61 1670 aaKnown RBP17.09■□□□□ 0.33
UBA3-201ENST00000349511 COL5A2P05997 1499 aaPredicted RBP17.09■□□□□ 0.33
UBA3-201ENST00000349511 NUTM2BA6NNL0 878 aaPredicted RBP17.09■□□□□ 0.33
UBA3-201ENST00000349511 NUTM2EB1AL46 878 aaPredicted RBP17.09■□□□□ 0.33
UBA3-201ENST00000349511 NUTM2AQ8IVF1 878 aaPredicted RBP17.09■□□□□ 0.33
UBA3-201ENST00000349511 CENPQQ7L2Z9 268 aaPredicted RBP17.09■□□□□ 0.33
UBA3-201ENST00000349511 TAF7Q15545 349 aaPredicted RBP17.08■□□□□ 0.33
UBA3-201ENST00000349511 ZKSCAN2Q63HK3 967 aa17.08■□□□□ 0.32
UBA3-201ENST00000349511 RNMTO43148 476 aaKnown RBP17.06■□□□□ 0.32
UBA3-201ENST00000349511 TRIM27P14373 513 aa17.06■□□□□ 0.32
UBA3-201ENST00000349511 TEFQ10587 303 aa17.06■□□□□ 0.32
UBA3-201ENST00000349511 PDE3AQ14432 1141 aa17.06■□□□□ 0.32
UBA3-201ENST00000349511 ALDH1L2Q3SY69 923 aa17.06■□□□□ 0.32
UBA3-201ENST00000349511 ABCC6O95255 1503 aa17.06■□□□□ 0.32
UBA3-201ENST00000349511 CEMIPQ8WUJ3 1361 aa17.06■□□□□ 0.32
UBA3-201ENST00000349511 FTSJ3Q8IY81 847 aaKnown RBP17.06■□□□□ 0.32
UBA3-201ENST00000349511 NECTIN2Q92692 538 aa17.06■□□□□ 0.32
UBA3-201ENST00000349511 COL16A1Q07092 1604 aaPredicted RBP17.06■□□□□ 0.32
UBA3-201ENST00000349511 KCNQ3O43525 872 aa17.05■□□□□ 0.32
UBA3-201ENST00000349511 MRPL50Q8N5N7 158 aaKnown RBP17.05■□□□□ 0.32
UBA3-201ENST00000349511 SPG7Q9UQ90 795 aa17.05■□□□□ 0.32
UBA3-201ENST00000349511 LRRC37A3O60309 1634 aa17.05■□□□□ 0.32
UBA3-201ENST00000349511 CYP27B1O15528 508 aa17.04■□□□□ 0.32
UBA3-201ENST00000349511 ATF7IPQ6VMQ6 1270 aa17.04■□□□□ 0.32
UBA3-201ENST00000349511 DZIP1LQ8IYY4 767 aaKnown RBP17.04■□□□□ 0.32
UBA3-201ENST00000349511 VIRMAQ69YN4 1812 aaKnown RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms