RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 DRC1Q96MC2 740 aa13.08□□□□□ -0.31
SMARCE1-202ENST00000348513 DCAF8L1A6NGE4 600 aa13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 IPO7O95373 1038 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 ZC3H6P61129 1189 aaKnown RBP13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 CNKSR2Q8WXI2 1034 aa13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 SHTN1A0MZ66 631 aa13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 ANKLE2Q86XL3 938 aa13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 ERLIN1O75477 346 aa13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 EHBP1L1Q8N3D4 1523 aa13.08□□□□□ -0.32
SMARCE1-202ENST00000348513 ENOX2Q16206 610 aaKnown RBP13.07□□□□□ -0.32
SMARCE1-202ENST00000348513 TOPBP1Q92547 1522 aa13.07□□□□□ -0.32
SMARCE1-202ENST00000348513 ATP2B2Q01814 1243 aa13.07□□□□□ -0.32
SMARCE1-202ENST00000348513 PSMA5P28066 241 aa13.07□□□□□ -0.32
SMARCE1-202ENST00000348513 MBD3O95983 291 aa13.07□□□□□ -0.32
SMARCE1-202ENST00000348513 BRMS1Q9HCU9 246 aa13.07□□□□□ -0.32
SMARCE1-202ENST00000348513 PRDM11Q9NQV5 511 aa13.07□□□□□ -0.32
SMARCE1-202ENST00000348513 NEK4P51957 841 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 TERF1P54274 439 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 NAP1L1P55209 391 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 FEZ1Q99689 392 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 IBSPP21815 317 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 ZNF692Q9BU19 519 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 ERICH3Q5RHP9 1530 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 HFM1A2PYH4 1435 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 CEBPZQ03701 1054 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 GABPB1Q06547 395 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 CCDC85AQ96PX6 553 aaPredicted RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 BICDL1Q6ZP65 573 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 MIS18AQ9NYP9 233 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 SPG7Q9UQ90 795 aa13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 CDK13Q14004 1512 aaKnown RBP13.06□□□□□ -0.32
SMARCE1-202ENST00000348513 RPAINQ86UA6 219 aa13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 POLA1P09884 1462 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 STK3Q13188 491 aa13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 CCDC158Q5M9N0 1113 aa13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 C10orf67Q8IYJ2 551 aa13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 TROQ12816 1431 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 POLR3GO15318 223 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 GBP2P32456 591 aaPredicted RBP13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 BMS1Q14692 1282 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 SART3Q15020 963 aaKnown RBP13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 WAPLQ7Z5K2 1190 aa13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.05□□□□□ -0.32
SMARCE1-202ENST00000348513 GBP6Q6ZN66 633 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 SLC52A1Q9NWF4 448 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 BTBD11A6QL63 1104 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 HECW1Q76N89 1606 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 XBP1P17861 261 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 DAPK1P53355 1430 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 AP1ARQ63HQ0 302 aa13.04□□□□□ -0.32
SMARCE1-202ENST00000348513 CT47B1P0C2W7 299 aaPredicted RBP13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 PDILTQ8N807 584 aa13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 SDF4Q9BRK5 362 aa13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 PLEKHH2Q8IVE3 1493 aa13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 MICALCLQ6ZW33 695 aa13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 WDR66Q8TBY9 1149 aa13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 SRCIN1Q9C0H9 1055 aa13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 SF3B2Q13435 895 aaKnown RBP13.03□□□□□ -0.32
SMARCE1-202ENST00000348513 ERC1Q8IUD2 1116 aa13.02□□□□□ -0.32
SMARCE1-202ENST00000348513 FKBP4Q02790 459 aaKnown RBP eCLIP13.02□□□□□ -0.32
SMARCE1-202ENST00000348513 CCDC184Q52MB2 194 aa13.02□□□□□ -0.32
SMARCE1-202ENST00000348513 KIF2AO00139 706 aaPredicted RBP13.02□□□□□ -0.33
SMARCE1-202ENST00000348513 MAP2K2P36507 400 aa13.02□□□□□ -0.33
SMARCE1-202ENST00000348513 EFCC1Q9HA90 598 aa13.02□□□□□ -0.33
SMARCE1-202ENST00000348513 EFCAB5A4FU69 1503 aa13.02□□□□□ -0.33
SMARCE1-202ENST00000348513 XRCC6P12956 609 aaKnown RBP eCLIP13.02□□□□□ -0.33
SMARCE1-202ENST00000348513 EPS15P42566 896 aa13.02□□□□□ -0.33
SMARCE1-202ENST00000348513 RBM5P52756 815 aaKnown RBP eCLIP13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 OLFM4Q6UX06 510 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 LRRCC1Q9C099 1032 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 NUDT16Q96DE0 195 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 THUMPD2Q9BTF0 503 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 FMNL3Q8IVF7 1028 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 GOLGA6L10A0A0M3HER8 536 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 CCT4P50991 539 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 SPC24Q8NBT2 197 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 MPHOSPH8Q99549 860 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 LMAN1P49257 510 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 FILIP1Q7Z7B0 1213 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 GNL3LQ9NVN8 582 aaKnown RBP13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 SWAP70Q9UH65 585 aa13.01□□□□□ -0.33
SMARCE1-202ENST00000348513 CCDC57Q2TAC2 916 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 CCDC102AQ96A19 550 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 FMNL2Q96PY5 1086 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 SLC3A2P08195 630 aaKnown RBP13□□□□□ -0.33
SMARCE1-202ENST00000348513 AACSQ86V21 672 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 ARHGEF11O15085 1522 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 NEBLO76041 1014 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 GCC1Q96CN9 775 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 IL1RAPL2Q9NP60 686 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 IGSF3O75054 1194 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 TMEM132AQ24JP5 1023 aa13□□□□□ -0.33
SMARCE1-202ENST00000348513 NSD3Q9BZ95 1437 aa12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 FIBPO43427 364 aa12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 MCM10Q7L590 875 aa12.99□□□□□ -0.33
SMARCE1-202ENST00000348513 RSPH14Q9UHP6 348 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms