RNA–Protein interactions for RNA: ENST00000348264.6

CLCC1-202, Transcript of chloride channel CLIC like 1, humanhuman

TSL 1 (best) BASIC

Gene CLCC1, Length 1,124 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-202ENST00000348264 NBPF14Q5TI25 921 aa18.37■□□□□ 0.53
CLCC1-202ENST00000348264 DDX54Q8TDD1 881 aaKnown RBP18.36■□□□□ 0.53
CLCC1-202ENST00000348264 CASZ1Q86V15 1759 aa18.35■□□□□ 0.53
CLCC1-202ENST00000348264 PANK3Q9H999 370 aa18.35■□□□□ 0.53
CLCC1-202ENST00000348264 TXNRD1Q16881 649 aa18.34■□□□□ 0.53
CLCC1-202ENST00000348264 PAPPAQ13219 1627 aa18.34■□□□□ 0.53
CLCC1-202ENST00000348264 NCAPD2Q15021 1401 aa18.33■□□□□ 0.53
CLCC1-202ENST00000348264 PKD1L3Q7Z443 1732 aa18.33■□□□□ 0.52
CLCC1-202ENST00000348264 PPM1GO15355 546 aaPredicted RBP18.33■□□□□ 0.52
CLCC1-202ENST00000348264 ZCRB1Q8TBF4 217 aaKnown RBP18.33■□□□□ 0.52
CLCC1-202ENST00000348264 TNNT2P45379 298 aaPredicted RBP18.31■□□□□ 0.52
CLCC1-202ENST00000348264 RAPGEF4Q8WZA2 1011 aa18.31■□□□□ 0.52
CLCC1-202ENST00000348264 POLKQ9UBT6 870 aa18.31■□□□□ 0.52
CLCC1-202ENST00000348264 NSD2O96028 1365 aa18.3■□□□□ 0.52
CLCC1-202ENST00000348264 WASHC2AQ641Q2 1341 aa18.3■□□□□ 0.52
CLCC1-202ENST00000348264 KIF7Q2M1P5 1343 aa18.29■□□□□ 0.52
CLCC1-202ENST00000348264 TATP17735 454 aaPredicted RBP18.29■□□□□ 0.52
CLCC1-202ENST00000348264 LY75O60449 1722 aa18.29■□□□□ 0.52
CLCC1-202ENST00000348264 TOGARAM1Q9Y4F4 1720 aa18.29■□□□□ 0.52
CLCC1-202ENST00000348264 PRIM1P49642 420 aaKnown RBP18.27■□□□□ 0.52
CLCC1-202ENST00000348264 SYTL4Q96C24 671 aaPredicted RBP18.27■□□□□ 0.52
CLCC1-202ENST00000348264 PDGFDQ9GZP0 370 aaPredicted RBP18.27■□□□□ 0.52
CLCC1-202ENST00000348264 PCDH11XQ9BZA7 1347 aa18.26■□□□□ 0.51
CLCC1-202ENST00000348264 PCDH11YQ9BZA8 1340 aa18.26■□□□□ 0.51
CLCC1-202ENST00000348264 STK32BQ9NY57 414 aa18.26■□□□□ 0.51
CLCC1-202ENST00000348264 SLC15A2Q16348 729 aa18.25■□□□□ 0.51
CLCC1-202ENST00000348264 EYA1Q99502 592 aa18.25■□□□□ 0.51
CLCC1-202ENST00000348264 LRRC4BQ9NT99 713 aa18.25■□□□□ 0.51
CLCC1-202ENST00000348264 ITGB4P16144 1822 aa18.25■□□□□ 0.51
CLCC1-202ENST00000348264 TUBGCP6Q96RT7 1819 aa18.24■□□□□ 0.51
CLCC1-202ENST00000348264 CYP27B1O15528 508 aa18.24■□□□□ 0.51
CLCC1-202ENST00000348264 EIF4A2Q14240 407 aaKnown RBP18.24■□□□□ 0.51
CLCC1-202ENST00000348264 SPON1Q9HCB6 807 aa18.23■□□□□ 0.51
CLCC1-202ENST00000348264 KNSTRNQ9Y448 316 aa18.23■□□□□ 0.51
CLCC1-202ENST00000348264 ZNF827Q17R98 1081 aa18.22■□□□□ 0.51
CLCC1-202ENST00000348264 MORC1Q86VD1 984 aa18.22■□□□□ 0.51
CLCC1-202ENST00000348264 QSER1Q2KHR3 1735 aa18.22■□□□□ 0.51
CLCC1-202ENST00000348264 AMER1Q5JTC6 1135 aaPredicted RBP18.21■□□□□ 0.51
CLCC1-202ENST00000348264 ZBTB7AO95365 584 aa18.2■□□□□ 0.5
CLCC1-202ENST00000348264 KCNQ4P56696 695 aa18.2■□□□□ 0.5
CLCC1-202ENST00000348264 SLC27A3Q5K4L6 730 aa18.2■□□□□ 0.5
CLCC1-202ENST00000348264 IGSF1Q8N6C5 1336 aa18.2■□□□□ 0.5
CLCC1-202ENST00000348264 TAF1LQ8IZX4 1826 aa18.17■□□□□ 0.5
CLCC1-202ENST00000348264 AKT1S1Q96B36 256 aa18.17■□□□□ 0.5
CLCC1-202ENST00000348264 SPG7Q9UQ90 795 aa18.17■□□□□ 0.5
CLCC1-202ENST00000348264 C5P01031 1676 aa18.17■□□□□ 0.5
CLCC1-202ENST00000348264 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.16■□□□□ 0.51e-6■■■■□ 19.3
CLCC1-202ENST00000348264 PPP1R1BQ9UD71 204 aaPredicted RBP18.16■□□□□ 0.5
CLCC1-202ENST00000348264 PLEKHG2Q9H7P9 1386 aa18.16■□□□□ 0.5
CLCC1-202ENST00000348264 PER1O15534 1290 aaPredicted RBP18.15■□□□□ 0.5
CLCC1-202ENST00000348264 PTGER2P43116 358 aa18.15■□□□□ 0.5
CLCC1-202ENST00000348264 NKX1-1Q15270 411 aaPredicted RBP18.15■□□□□ 0.5
CLCC1-202ENST00000348264 CCNL1Q9UK58 526 aaPredicted RBP18.15■□□□□ 0.5
CLCC1-202ENST00000348264 ATF5Q9Y2D1 282 aaPredicted RBP18.15■□□□□ 0.5
CLCC1-202ENST00000348264 PALLDQ8WX93 1383 aa18.15■□□□□ 0.5
CLCC1-202ENST00000348264 MPRIPQ6WCQ1 1025 aa18.14■□□□□ 0.49
CLCC1-202ENST00000348264 PHKG2P15735 406 aa18.13■□□□□ 0.49
CLCC1-202ENST00000348264 MTFR1LQ9H019 292 aa18.13■□□□□ 0.49
CLCC1-202ENST00000348264 PNPLA7Q6ZV29 1317 aa18.13■□□□□ 0.49
CLCC1-202ENST00000348264 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
CLCC1-202ENST00000348264 SGIP1Q9BQI5 828 aa18.12■□□□□ 0.49
CLCC1-202ENST00000348264 COL24A1Q17RW2 1714 aa18.12■□□□□ 0.49
CLCC1-202ENST00000348264 CC2D1BQ5T0F9 858 aaKnown RBP18.11■□□□□ 0.49
CLCC1-202ENST00000348264 IFNL2Q8IZJ0 200 aa18.11■□□□□ 0.49
CLCC1-202ENST00000348264 PIGBQ92521 554 aa18.11■□□□□ 0.49
CLCC1-202ENST00000348264 IL13P35225 146 aa18.1■□□□□ 0.49
CLCC1-202ENST00000348264 TFCP2L1Q9NZI6 479 aa18.1■□□□□ 0.49
CLCC1-202ENST00000348264 C4BP0C0L5 1744 aa18.09■□□□□ 0.49
CLCC1-202ENST00000348264 KDRP35968 1356 aa18.09■□□□□ 0.49
CLCC1-202ENST00000348264 NPC1L1Q9UHC9 1359 aa18.09■□□□□ 0.49
CLCC1-202ENST00000348264 MTHFSP49914 203 aa18.08■□□□□ 0.48
CLCC1-202ENST00000348264 UBR3Q6ZT12 1888 aa18.07■□□□□ 0.48
CLCC1-202ENST00000348264 KDM6AO15550 1401 aaPredicted RBP18.07■□□□□ 0.48
CLCC1-202ENST00000348264 SULT6B1Q6IMI4 303 aa18.07■□□□□ 0.48
CLCC1-202ENST00000348264 SMARCC1Q92922 1105 aaPredicted RBP18.07■□□□□ 0.48
CLCC1-202ENST00000348264 TMOD3Q9NYL9 352 aa18.07■□□□□ 0.48
CLCC1-202ENST00000348264 PLEKHO1Q53GL0 409 aaPredicted RBP18.06■□□□□ 0.48
CLCC1-202ENST00000348264 ZNF530Q6P9A1 599 aaPredicted RBP18.06■□□□□ 0.48
CLCC1-202ENST00000348264 COL3A1P02461 1466 aaPredicted RBP18.06■□□□□ 0.48
CLCC1-202ENST00000348264 CNGB1Q14028 1251 aaPredicted RBP18.05■□□□□ 0.48
CLCC1-202ENST00000348264 ASAP1Q9ULH1 1129 aa18.05■□□□□ 0.48
CLCC1-202ENST00000348264 VIRMAQ69YN4 1812 aaKnown RBP18.05■□□□□ 0.48
CLCC1-202ENST00000348264 SCN11AQ9UI33 1791 aa18.04■□□□□ 0.48
CLCC1-202ENST00000348264 UTRNP46939 3433 aa18.04■□□□□ 0.48
CLCC1-202ENST00000348264 AMOTQ4VCS5 1084 aa18.04■□□□□ 0.48
CLCC1-202ENST00000348264 SLC16A10Q8TF71 515 aa18.04■□□□□ 0.48
CLCC1-202ENST00000348264 FHDC1Q9C0D6 1143 aaPredicted RBP18.04■□□□□ 0.48
CLCC1-202ENST00000348264 COL23A1Q86Y22 540 aaPredicted RBP18.03■□□□□ 0.48
CLCC1-202ENST00000348264 DCAF5Q96JK2 942 aa18.03■□□□□ 0.48
CLCC1-202ENST00000348264 LOC102724428A0A0B4J2F2 783 aa18.02■□□□□ 0.48
CLCC1-202ENST00000348264 HSP90AB1P08238 724 aaKnown RBP18.02■□□□□ 0.48
CLCC1-202ENST00000348264 SIK1P57059 783 aa18.02■□□□□ 0.48
CLCC1-202ENST00000348264 ARXQ96QS3 562 aa18.02■□□□□ 0.48
CLCC1-202ENST00000348264 ERVV-2B6SEH9 535 aa18.01■□□□□ 0.47
CLCC1-202ENST00000348264 AMIGO3Q86WK7 504 aa18.01■□□□□ 0.47
CLCC1-202ENST00000348264 LINC00116Q8NCU8 138 aa18.01■□□□□ 0.47
CLCC1-202ENST00000348264 SYT17Q9BSW7 474 aa18.01■□□□□ 0.47
CLCC1-202ENST00000348264 ATG3Q9NT62 314 aa18.01■□□□□ 0.47
CLCC1-202ENST00000348264 ZNF831Q5JPB2 1677 aa18.01■□□□□ 0.47
CLCC1-202ENST00000348264 HMOX1P09601 288 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms