RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 PHACTR3Q96KR7 559 aa12.66□□□□□ -0.38
CLDN18-202ENST00000343735 IL16Q14005 1332 aa12.66□□□□□ -0.38
CLDN18-202ENST00000343735 RAPGEF4Q8WZA2 1011 aa12.66□□□□□ -0.38
CLDN18-202ENST00000343735 LMO7Q8WWI1 1683 aa12.66□□□□□ -0.38
CLDN18-202ENST00000343735 CAMTA1Q9Y6Y1 1673 aa12.65□□□□□ -0.38
CLDN18-202ENST00000343735 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
CLDN18-202ENST00000343735 MYH16Q9H6N6 1097 aa12.65□□□□□ -0.38
CLDN18-202ENST00000343735 TOM1L2Q6ZVM7 507 aa12.65□□□□□ -0.39
CLDN18-202ENST00000343735 RTF1Q92541 710 aaKnown RBP12.65□□□□□ -0.39
CLDN18-202ENST00000343735 COL5A2P05997 1499 aaPredicted RBP12.64□□□□□ -0.39
CLDN18-202ENST00000343735 TATP17735 454 aaPredicted RBP12.64□□□□□ -0.39
CLDN18-202ENST00000343735 CARD10Q9BWT7 1032 aa12.64□□□□□ -0.39
CLDN18-202ENST00000343735 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.64□□□□□ -0.39
CLDN18-202ENST00000343735 SLFN5Q08AF3 891 aa12.63□□□□□ -0.39
CLDN18-202ENST00000343735 PPP4R2Q9NY27 417 aa12.63□□□□□ -0.39
CLDN18-202ENST00000343735 BTG4Q9NY30 223 aa12.63□□□□□ -0.39
CLDN18-202ENST00000343735 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.63□□□□□ -0.39
CLDN18-202ENST00000343735 USHBP1Q8N6Y0 703 aa12.63□□□□□ -0.39
CLDN18-202ENST00000343735 TRIM35Q9UPQ4 493 aa12.63□□□□□ -0.39
CLDN18-202ENST00000343735 NUTM2BA6NNL0 878 aaPredicted RBP12.63□□□□□ -0.39
CLDN18-202ENST00000343735 NUTM2EB1AL46 878 aaPredicted RBP12.63□□□□□ -0.39
CLDN18-202ENST00000343735 NUTM2AQ8IVF1 878 aaPredicted RBP12.63□□□□□ -0.39
CLDN18-202ENST00000343735 SPG7Q9UQ90 795 aa12.63□□□□□ -0.39
CLDN18-202ENST00000343735 RGPD5Q99666 1765 aa12.63□□□□□ -0.39
CLDN18-202ENST00000343735 MTHFSDQ2M296 383 aaKnown RBP12.62□□□□□ -0.39
CLDN18-202ENST00000343735 ARXQ96QS3 562 aa12.62□□□□□ -0.39
CLDN18-202ENST00000343735 CRB1P82279 1406 aa12.62□□□□□ -0.39
CLDN18-202ENST00000343735 GNAT3A8MTJ3 354 aa12.62□□□□□ -0.39
CLDN18-202ENST00000343735 ADAMTS2O95450 1211 aa12.62□□□□□ -0.39
CLDN18-202ENST00000343735 HSPA1LP34931 641 aa12.62□□□□□ -0.39
CLDN18-202ENST00000343735 STRN4Q9NRL3 753 aa12.62□□□□□ -0.39
CLDN18-202ENST00000343735 GNAI1P63096 354 aa12.61□□□□□ -0.39
CLDN18-202ENST00000343735 C1orf141Q5JVX7 400 aa12.61□□□□□ -0.39
CLDN18-202ENST00000343735 C20orf194Q5TEA3 1177 aa12.61□□□□□ -0.39
CLDN18-202ENST00000343735 TRMT2AQ8IZ69 625 aaKnown RBP12.61□□□□□ -0.39
CLDN18-202ENST00000343735 RGS3P49796 1198 aa12.6□□□□□ -0.39
CLDN18-202ENST00000343735 AKAP4Q5JQC9 854 aa12.6□□□□□ -0.39
CLDN18-202ENST00000343735 FRAT1Q92837 279 aaPredicted RBP12.6□□□□□ -0.39
CLDN18-202ENST00000343735 MAP3K5Q99683 1374 aa12.6□□□□□ -0.39
CLDN18-202ENST00000343735 CDCA7Q9BWT1 371 aaPredicted RBP12.59□□□□□ -0.39
CLDN18-202ENST00000343735 IFT57Q9NWB7 429 aa12.59□□□□□ -0.39
CLDN18-202ENST00000343735 DUSP27Q5VZP5 1158 aa12.59□□□□□ -0.39
CLDN18-202ENST00000343735 RCAN3Q9UKA8 241 aa12.59□□□□□ -0.39
CLDN18-202ENST00000343735 THRAP3Q9Y2W1 955 aaKnown RBP12.59□□□□□ -0.39
CLDN18-202ENST00000343735 FANCIQ9NVI1 1328 aa12.59□□□□□ -0.39
CLDN18-202ENST00000343735 HSP90AB1P08238 724 aaKnown RBP12.59□□□□□ -0.39
CLDN18-202ENST00000343735 IL2RBP14784 551 aa12.59□□□□□ -0.39
CLDN18-202ENST00000343735 ZNF530Q6P9A1 599 aaPredicted RBP12.59□□□□□ -0.39
CLDN18-202ENST00000343735 LARP1Q6PKG0 1096 aaKnown RBP12.59□□□□□ -0.39
CLDN18-202ENST00000343735 IL27Q8NEV9 243 aa12.59□□□□□ -0.39
CLDN18-202ENST00000343735 RGPD2P0DJD1 1756 aa12.58□□□□□ -0.39
CLDN18-202ENST00000343735 CT47B1P0C2W7 299 aaPredicted RBP12.58□□□□□ -0.4
CLDN18-202ENST00000343735 NGLY1Q96IV0 654 aa12.58□□□□□ -0.4
CLDN18-202ENST00000343735 BABAM1Q9NWV8 329 aa12.58□□□□□ -0.4
CLDN18-202ENST00000343735 NWD2Q9ULI1 1742 aa12.58□□□□□ -0.4
CLDN18-202ENST00000343735 CANXP27824 592 aaKnown RBP12.58□□□□□ -0.4
CLDN18-202ENST00000343735 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
CLDN18-202ENST00000343735 CFAP44Q96MT7 982 aa12.58□□□□□ -0.4
CLDN18-202ENST00000343735 CLUAP1Q96AJ1 413 aa12.57□□□□□ -0.4
CLDN18-202ENST00000343735 SLIT2O94813 1529 aa12.57□□□□□ -0.4
CLDN18-202ENST00000343735 IFNL2Q8IZJ0 200 aa12.56□□□□□ -0.4
CLDN18-202ENST00000343735 OVOS2A0A0G2JMS6 1433 aa12.56□□□□□ -0.4
CLDN18-202ENST00000343735 UNC5CLQ8IV45 518 aa12.56□□□□□ -0.4
CLDN18-202ENST00000343735 PLCH1Q4KWH8 1693 aa12.56□□□□□ -0.4
CLDN18-202ENST00000343735 FNBP4Q8N3X1 1017 aaPredicted RBP12.56□□□□□ -0.4
CLDN18-202ENST00000343735 PARP4Q9UKK3 1724 aaKnown RBP12.56□□□□□ -0.4
CLDN18-202ENST00000343735 SLC4A3P48751 1232 aa12.55□□□□□ -0.4
CLDN18-202ENST00000343735 ZCRB1Q8TBF4 217 aaKnown RBP12.55□□□□□ -0.4
CLDN18-202ENST00000343735 PCDH11XQ9BZA7 1347 aa12.55□□□□□ -0.4
CLDN18-202ENST00000343735 PCDH11YQ9BZA8 1340 aa12.55□□□□□ -0.4
CLDN18-202ENST00000343735 TCERG1O14776 1098 aaKnown RBP12.55□□□□□ -0.4
CLDN18-202ENST00000343735 C8orf37Q96NL8 207 aa12.55□□□□□ -0.4
CLDN18-202ENST00000343735 CRBNQ96SW2 442 aa12.55□□□□□ -0.4
CLDN18-202ENST00000343735 DLG5Q8TDM6 1919 aa12.55□□□□□ -0.4
CLDN18-202ENST00000343735 LAS1LQ9Y4W2 734 aaKnown RBP12.55□□□□□ -0.4
CLDN18-202ENST00000343735 ZNF853P0CG23 659 aa12.54□□□□□ -0.4
CLDN18-202ENST00000343735 MCM10Q7L590 875 aa12.54□□□□□ -0.4
CLDN18-202ENST00000343735 ZNF428Q96B54 188 aa12.54□□□□□ -0.4
CLDN18-202ENST00000343735 MEGF6O75095 1541 aa12.54□□□□□ -0.4
CLDN18-202ENST00000343735 SPINK5Q9NQ38 1064 aaPredicted RBP12.54□□□□□ -0.4
CLDN18-202ENST00000343735 EIF5BO60841 1220 aaKnown RBP12.53□□□□□ -0.4
CLDN18-202ENST00000343735 TEFQ10587 303 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 TAF7Q15545 349 aaPredicted RBP12.53□□□□□ -0.4
CLDN18-202ENST00000343735 VPS72Q15906 364 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 SPATA31A1Q5TZJ5 1347 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 CEMIPQ8WUJ3 1361 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 SPATA31A5Q5VU36 1347 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 SPATA31A7Q8IWB4 1347 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 CHL1O00533 1208 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 PHKG2P15735 406 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 DCAF5Q96JK2 942 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 CHMP4AQ9BY43 222 aa12.53□□□□□ -0.4
CLDN18-202ENST00000343735 DCTN1Q14203 1278 aa12.52□□□□□ -0.4
CLDN18-202ENST00000343735 BARGINQ6ZT62 677 aa12.52□□□□□ -0.4
CLDN18-202ENST00000343735 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.52□□□□□ -0.4
CLDN18-202ENST00000343735 FBXO41Q8TF61 875 aa12.52□□□□□ -0.4
CLDN18-202ENST00000343735 CCDC9Q9Y3X0 531 aaKnown RBP12.52□□□□□ -0.4
CLDN18-202ENST00000343735 NRAPQ86VF7 1730 aa12.52□□□□□ -0.4
CLDN18-202ENST00000343735 PKD1L3Q7Z443 1732 aa12.52□□□□□ -0.41
CLDN18-202ENST00000343735 RNMTO43148 476 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms