RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 MLH3Q9UHC1 1453 aa18.55■□□□□ 0.56
SNX18-202ENST00000343017 QRICH2Q9H0J4 1663 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 KRT24Q2M2I5 525 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 ARHGAP45Q92619 1136 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 ADCY5O95622 1261 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 BRD1O95696 1058 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
SNX18-202ENST00000343017 BCL2L12Q9HB09 334 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 MROH1Q8NDA8 1641 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 DTNBO60941 627 aa18.54■□□□□ 0.56
SNX18-202ENST00000343017 BRPF1P55201 1214 aaPredicted RBP18.54■□□□□ 0.56
SNX18-202ENST00000343017 USP48Q86UV5 1035 aa18.53■□□□□ 0.56
SNX18-202ENST00000343017 PALD1Q9ULE6 856 aa18.53■□□□□ 0.56
SNX18-202ENST00000343017 KIF3AQ9Y496 699 aa18.53■□□□□ 0.56
SNX18-202ENST00000343017 COL3A1P02461 1466 aaPredicted RBP18.53■□□□□ 0.56
SNX18-202ENST00000343017 MYO3AQ8NEV4 1616 aa18.53■□□□□ 0.56
SNX18-202ENST00000343017 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 HCLS1P14317 486 aaPredicted RBP18.52■□□□□ 0.56
SNX18-202ENST00000343017 DCTN1Q14203 1278 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 CASC1Q6TDU7 716 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 HECW2Q9P2P5 1572 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 RIMBP3CA6NJZ7 1639 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 RIMBP3BA6NNM3 1639 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 RIMBP3Q9UFD9 1639 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 MROH2AA6NES4 1674 aa18.52■□□□□ 0.56
SNX18-202ENST00000343017 PPRC1Q5VV67 1664 aaKnown RBP18.52■□□□□ 0.56
SNX18-202ENST00000343017 NSD2O96028 1365 aa18.52■□□□□ 0.55
SNX18-202ENST00000343017 FRMPD1Q5SYB0 1578 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 NEO1Q92859 1461 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 PIK3R4Q99570 1358 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 PRIMPOLQ96LW4 560 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 EFCAB6Q5THR3 1501 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 ERC2O15083 957 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 REC8O95072 547 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 U2AF2P26368 475 aaKnown RBP eCLIP18.51■□□□□ 0.55
SNX18-202ENST00000343017 UPF3BQ9BZI7 483 aaKnown RBP18.51■□□□□ 0.55
SNX18-202ENST00000343017 DEPDC5O75140 1603 aa18.51■□□□□ 0.55
SNX18-202ENST00000343017 PTCH1Q13635 1447 aa18.5■□□□□ 0.55
SNX18-202ENST00000343017 FCHSD2O94868 740 aa18.5■□□□□ 0.55
SNX18-202ENST00000343017 ESF1Q9H501 851 aaKnown RBP18.5■□□□□ 0.55
SNX18-202ENST00000343017 HMGN5P82970 282 aaKnown RBP18.5■□□□□ 0.55
SNX18-202ENST00000343017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.5■□□□□ 0.55
SNX18-202ENST00000343017 MINK1Q8N4C8 1332 aaPredicted RBP18.5■□□□□ 0.55
SNX18-202ENST00000343017 NRXN1Q9ULB1 1477 aa18.49■□□□□ 0.55
SNX18-202ENST00000343017 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
SNX18-202ENST00000343017 BCL11BQ9C0K0 894 aaPredicted RBP18.49■□□□□ 0.55
SNX18-202ENST00000343017 ZNF428Q96B54 188 aa18.48■□□□□ 0.55
SNX18-202ENST00000343017 VWDEQ8N2E2 1590 aa18.48■□□□□ 0.55
SNX18-202ENST00000343017 NFE2L2Q16236 605 aa18.48■□□□□ 0.55
SNX18-202ENST00000343017 PDCL2Q8N4E4 241 aa18.48■□□□□ 0.55
SNX18-202ENST00000343017 ANKRD44Q8N8A2 993 aa18.48■□□□□ 0.55
SNX18-202ENST00000343017 API5Q9BZZ5 524 aaKnown RBP18.48■□□□□ 0.55
SNX18-202ENST00000343017 KIF1BO60333 1816 aa18.48■□□□□ 0.55
SNX18-202ENST00000343017 GTF2F1P35269 517 aaKnown RBP eCLIP18.47■□□□□ 0.55
SNX18-202ENST00000343017 CEP85Q6P2H3 762 aa18.47■□□□□ 0.55
SNX18-202ENST00000343017 SYAP1Q96A49 352 aaPredicted RBP18.47■□□□□ 0.55
SNX18-202ENST00000343017 LARP6Q9BRS8 491 aaKnown RBP18.47■□□□□ 0.55
SNX18-202ENST00000343017 PYCARDQ9ULZ3 195 aa18.47■□□□□ 0.55
SNX18-202ENST00000343017 GNAI1P63096 354 aa18.47■□□□□ 0.55
SNX18-202ENST00000343017 SPC24Q8NBT2 197 aa18.47■□□□□ 0.55
SNX18-202ENST00000343017 USP32Q8NFA0 1604 aa18.47■□□□□ 0.55
SNX18-202ENST00000343017 RIOK3O14730 519 aaKnown RBP18.47■□□□□ 0.55
SNX18-202ENST00000343017 FGD1P98174 961 aa18.47■□□□□ 0.55
SNX18-202ENST00000343017 MEIS3Q99687 375 aa18.47■□□□□ 0.55
SNX18-202ENST00000343017 KNDC1Q76NI1 1749 aa18.46■□□□□ 0.55
SNX18-202ENST00000343017 ADGRB1O14514 1584 aa18.46■□□□□ 0.55
SNX18-202ENST00000343017 VGFO15240 615 aaPredicted RBP18.46■□□□□ 0.55
SNX18-202ENST00000343017 AP5Z1O43299 807 aa18.46■□□□□ 0.55
SNX18-202ENST00000343017 FKBP5Q13451 457 aaPredicted RBP18.46■□□□□ 0.55
SNX18-202ENST00000343017 GTPBP4Q9BZE4 634 aaKnown RBP18.45■□□□□ 0.54
SNX18-202ENST00000343017 CNPY2Q9Y2B0 182 aa18.45■□□□□ 0.54
SNX18-202ENST00000343017 ABCC3O15438 1527 aa18.44■□□□□ 0.54
SNX18-202ENST00000343017 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
SNX18-202ENST00000343017 ZC3H13Q5T200 1668 aaKnown RBP18.44■□□□□ 0.54
SNX18-202ENST00000343017 ANO2Q9NQ90 1003 aa18.44■□□□□ 0.54
SNX18-202ENST00000343017 IFT57Q9NWB7 429 aa18.44■□□□□ 0.54
SNX18-202ENST00000343017 LRRC7Q96NW7 1537 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 CUL4AQ13619 759 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 KCNF1Q9H3M0 494 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 POLKQ9UBT6 870 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 ZNF853P0CG23 659 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 GIMAP6Q6P9H5 292 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 SPTLC3Q9NUV7 552 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 IFT172Q9UG01 1749 aa18.43■□□□□ 0.54
SNX18-202ENST00000343017 PDE1AP54750 535 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 SRCIN1Q9C0H9 1055 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 TERF2IPQ9NYB0 399 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 EMILIN1Q9Y6C2 1016 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 PHF14O94880 888 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 CABP1Q9NZU7 370 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 DIP2CQ9Y2E4 1556 aa18.42■□□□□ 0.54
SNX18-202ENST00000343017 SETBP1Q9Y6X0 1596 aa18.41■□□□□ 0.54
SNX18-202ENST00000343017 KDM4AO75164 1064 aa18.41■□□□□ 0.54
SNX18-202ENST00000343017 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
SNX18-202ENST00000343017 BBXQ8WY36 941 aaPredicted RBP18.41■□□□□ 0.54
SNX18-202ENST00000343017 RILPL2Q969X0 211 aa18.41■□□□□ 0.54
SNX18-202ENST00000343017 EXOC6BQ9Y2D4 811 aa18.41■□□□□ 0.54
SNX18-202ENST00000343017 TCHHQ07283 1943 aa18.41■□□□□ 0.54
SNX18-202ENST00000343017 UVSSAQ2YD98 709 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms