RNA–Protein interactions for RNA: ENST00000342835.8

SPTB-201, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best)

Gene SPTB, Length 1,723 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-201ENST00000342835 NPHP3Q7Z494 1330 aa28.01■■■□□ 2.07
SPTB-201ENST00000342835 MRPL50Q8N5N7 158 aaKnown RBP28.01■■■□□ 2.07
SPTB-201ENST00000342835 LTV1Q96GA3 475 aaPredicted RBP28.01■■■□□ 2.07
SPTB-201ENST00000342835 TNNQ9UQP3 1299 aa28.01■■■□□ 2.07
SPTB-201ENST00000342835 LRRC37A3O60309 1634 aa28■■■□□ 2.07
SPTB-201ENST00000342835 STRCQ7RTU9 1775 aa28■■■□□ 2.07
SPTB-201ENST00000342835 GNAT3A8MTJ3 354 aa27.99■■■□□ 2.07
SPTB-201ENST00000342835 XPCQ01831 940 aaPredicted RBP27.99■■■□□ 2.07
SPTB-201ENST00000342835 LMOD2Q6P5Q4 547 aa27.99■■■□□ 2.07
SPTB-201ENST00000342835 RWDD1Q9H446 243 aaPredicted RBP27.99■■■□□ 2.07
SPTB-201ENST00000342835 MAP3K5Q99683 1374 aa27.99■■■□□ 2.07
SPTB-201ENST00000342835 ITPRIPQ8IWB1 547 aa27.98■■■□□ 2.07
SPTB-201ENST00000342835 TSPYL6Q8N831 410 aa27.98■■■□□ 2.07
SPTB-201ENST00000342835 C8orf58Q8NAV2 365 aa27.97■■■□□ 2.07
SPTB-201ENST00000342835 BABAM1Q9NWV8 329 aa27.97■■■□□ 2.07
SPTB-201ENST00000342835 API5Q9BZZ5 524 aaKnown RBP27.96■■■□□ 2.07
SPTB-201ENST00000342835 NCAPD2Q15021 1401 aa27.93■■■□□ 2.06
SPTB-201ENST00000342835 ZBTB7CA1YPR0 619 aa27.93■■■□□ 2.06
SPTB-201ENST00000342835 IGHDP01880 384 aa27.93■■■□□ 2.06
SPTB-201ENST00000342835 TMEM57Q8N5G2 664 aa27.93■■■□□ 2.06
SPTB-201ENST00000342835 SOS1Q07889 1333 aaPredicted RBP27.93■■■□□ 2.06
SPTB-201ENST00000342835 TNS3Q68CZ2 1445 aa27.93■■■□□ 2.06
SPTB-201ENST00000342835 TSPYL4Q9UJ04 414 aa27.92■■■□□ 2.06
SPTB-201ENST00000342835 CAMTA1Q9Y6Y1 1673 aa27.92■■■□□ 2.06
SPTB-201ENST00000342835 XIRP1Q702N8 1843 aaKnown RBP27.92■■■□□ 2.06
SPTB-201ENST00000342835 ABCC6O95255 1503 aa27.92■■■□□ 2.06
SPTB-201ENST00000342835 ELL2O00472 640 aaPredicted RBP27.92■■■□□ 2.06
SPTB-201ENST00000342835 PCDHB15Q9Y5E8 787 aa27.91■■■□□ 2.06
SPTB-201ENST00000342835 NBPF6Q5VWK0 638 aa27.9■■■□□ 2.06
SPTB-201ENST00000342835 NBPF4Q96M43 638 aa27.9■■■□□ 2.06
SPTB-201ENST00000342835 PDE4AP27815 886 aa27.89■■■□□ 2.06
SPTB-201ENST00000342835 MED1Q15648 1581 aaPredicted RBP27.89■■■□□ 2.06
SPTB-201ENST00000342835 ABCC4O15439 1325 aa27.89■■■□□ 2.05
SPTB-201ENST00000342835 AMOTQ4VCS5 1084 aa27.89■■■□□ 2.05
SPTB-201ENST00000342835 PXDNQ92626 1479 aa27.88■■■□□ 2.05
SPTB-201ENST00000342835 ANKRD24Q8TF21 1146 aa27.88■■■□□ 2.05
SPTB-201ENST00000342835 BACH2Q9BYV9 841 aa27.88■■■□□ 2.05
SPTB-201ENST00000342835 HDAC1Q13547 482 aaPredicted RBP27.87■■■□□ 2.05
SPTB-201ENST00000342835 PLEKHO1Q53GL0 409 aaPredicted RBP27.87■■■□□ 2.05
SPTB-201ENST00000342835 USHBP1Q8N6Y0 703 aa27.87■■■□□ 2.05
SPTB-201ENST00000342835 ZBTB40Q9NUA8 1239 aa27.86■■■□□ 2.05
SPTB-201ENST00000342835 PTPRCP08575 1304 aa27.85■■■□□ 2.05
SPTB-201ENST00000342835 LMO7Q8WWI1 1683 aa27.84■■■□□ 2.05
SPTB-201ENST00000342835 TAF7Q15545 349 aaPredicted RBP27.84■■■□□ 2.05
SPTB-201ENST00000342835 RGPD2P0DJD1 1756 aa27.83■■■□□ 2.05
SPTB-201ENST00000342835 SPATA31A3Q5VYP0 1347 aa27.83■■■□□ 2.05
SPTB-201ENST00000342835 PLEKHG2Q9H7P9 1386 aa27.83■■■□□ 2.05
SPTB-201ENST00000342835 OVOS2A0A0G2JMS6 1433 aa27.82■■■□□ 2.04
SPTB-201ENST00000342835 ANP32AP39687 249 aaKnown RBP27.82■■■□□ 2.04
SPTB-201ENST00000342835 AKAP4Q5JQC9 854 aa27.82■■■□□ 2.04
SPTB-201ENST00000342835 CEMIPQ8WUJ3 1361 aa27.82■■■□□ 2.04
SPTB-201ENST00000342835 CHMP4AQ9BY43 222 aa27.81■■■□□ 2.04
SPTB-201ENST00000342835 FAM208AQ9UK61 1670 aaKnown RBP27.81■■■□□ 2.04
SPTB-201ENST00000342835 IL17REQ8NFR9 667 aa27.81■■■□□ 2.04
SPTB-201ENST00000342835 ERBB3P21860 1342 aa27.8■■■□□ 2.04
SPTB-201ENST00000342835 RGS3P49796 1198 aa27.8■■■□□ 2.04
SPTB-201ENST00000342835 FAM161AQ3B820 660 aa27.8■■■□□ 2.04
SPTB-201ENST00000342835 LRRC59Q96AG4 307 aaKnown RBP27.8■■■□□ 2.04
SPTB-201ENST00000342835 BRINP3Q76B58 766 aa27.78■■■□□ 2.04
SPTB-201ENST00000342835 ZNF335Q9H4Z2 1342 aaPredicted RBP27.78■■■□□ 2.04
SPTB-201ENST00000342835 CRYBG1Q9Y4K1 1723 aa27.78■■■□□ 2.04
SPTB-201ENST00000342835 C1orf141Q5JVX7 400 aa27.78■■■□□ 2.04
SPTB-201ENST00000342835 ZNF530Q6P9A1 599 aaPredicted RBP27.78■■■□□ 2.04
SPTB-201ENST00000342835 CPDO75976 1380 aa27.77■■■□□ 2.04
SPTB-201ENST00000342835 ZBTB7BO15156 539 aaPredicted RBP27.77■■■□□ 2.04
SPTB-201ENST00000342835 ZC3H6P61129 1189 aaKnown RBP27.77■■■□□ 2.04
SPTB-201ENST00000342835 KRT24Q2M2I5 525 aa27.77■■■□□ 2.04
SPTB-201ENST00000342835 STK31Q9BXU1 1019 aa27.77■■■□□ 2.04
SPTB-201ENST00000342835 PLEKHG5O94827 1062 aa27.76■■■□□ 2.03
SPTB-201ENST00000342835 SKAP1Q86WV1 359 aa27.76■■■□□ 2.03
SPTB-201ENST00000342835 MIS18AQ9NYP9 233 aa27.76■■■□□ 2.03
SPTB-201ENST00000342835 CCDC30Q5VVM6 783 aa27.75■■■□□ 2.03
SPTB-201ENST00000342835 INTS3Q68E01 1043 aaKnown RBP27.75■■■□□ 2.03
SPTB-201ENST00000342835 SLAIN2Q9P270 581 aa27.75■■■□□ 2.03
SPTB-201ENST00000342835 AXIN2Q9Y2T1 843 aa27.75■■■□□ 2.03
SPTB-201ENST00000342835 DDX17Q92841 729 aaKnown RBP27.75■■■□□ 2.03
SPTB-201ENST00000342835 COL18A1P39060 1754 aa27.75■■■□□ 2.03
SPTB-201ENST00000342835 RGPD5Q99666 1765 aa27.75■■■□□ 2.03
SPTB-201ENST00000342835 CACNA1FO60840 1977 aa27.73■■■□□ 2.03
SPTB-201ENST00000342835 PDZRN3Q9UPQ7 1066 aa27.73■■■□□ 2.03
SPTB-201ENST00000342835 SLC4A2P04920 1241 aa27.72■■■□□ 2.03
SPTB-201ENST00000342835 HOXB7P09629 217 aa27.71■■■□□ 2.03
SPTB-201ENST00000342835 TEFQ10587 303 aa27.71■■■□□ 2.03
SPTB-201ENST00000342835 SMC5Q8IY18 1101 aa27.71■■■□□ 2.03
SPTB-201ENST00000342835 SOS2Q07890 1332 aaPredicted RBP27.71■■■□□ 2.03
SPTB-201ENST00000342835 RGS12O14924 1447 aa27.71■■■□□ 2.03
SPTB-201ENST00000342835 RAPGEF4Q8WZA2 1011 aa27.7■■■□□ 2.03
SPTB-201ENST00000342835 KDM3BQ7LBC6 1761 aa27.7■■■□□ 2.02
SPTB-201ENST00000342835 GCC1Q96CN9 775 aa27.67■■■□□ 2.02
SPTB-201ENST00000342835 NLRP2Q9NX02 1062 aa27.67■■■□□ 2.02
SPTB-201ENST00000342835 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.67■■■□□ 2.02
SPTB-201ENST00000342835 VIRMAQ69YN4 1812 aaKnown RBP27.67■■■□□ 2.02
SPTB-201ENST00000342835 RNMTO43148 476 aaKnown RBP27.67■■■□□ 2.02
SPTB-201ENST00000342835 TATP17735 454 aaPredicted RBP27.67■■■□□ 2.02
SPTB-201ENST00000342835 CSB-PGBD3P0DP91 1061 aa27.66■■■□□ 2.02
SPTB-201ENST00000342835 C8orf34Q49A92 452 aa27.66■■■□□ 2.02
SPTB-201ENST00000342835 CCT4P50991 539 aaKnown RBP27.65■■■□□ 2.02
SPTB-201ENST00000342835 SPG7Q9UQ90 795 aa27.65■■■□□ 2.02
SPTB-201ENST00000342835 ADAMTS7Q9UKP4 1686 aa27.65■■■□□ 2.02
SPTB-201ENST00000342835 LGR6Q9HBX8 967 aa27.64■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms