RNA–Protein interactions for RNA: ENST00000341372.7

TPM3-207, Transcript of tropomyosin 3, humanhuman

TSL 5 BASIC

Gene TPM3, Length 2,007 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-207ENST00000341372 CHRNA2Q15822 529 aa14.19□□□□□ -0.14
TPM3-207ENST00000341372 KRI1Q8N9T8 703 aaKnown RBP14.19□□□□□ -0.14
TPM3-207ENST00000341372 RAD21O60216 631 aa14.19□□□□□ -0.14
TPM3-207ENST00000341372 ZRANB1Q9UGI0 708 aa14.19□□□□□ -0.14
TPM3-207ENST00000341372 COL5A2P05997 1499 aaPredicted RBP14.18□□□□□ -0.14
TPM3-207ENST00000341372 LTN1O94822 1766 aa14.18□□□□□ -0.14
TPM3-207ENST00000341372 PYGBP11216 843 aa14.18□□□□□ -0.14
TPM3-207ENST00000341372 ARHGEF25Q86VW2 580 aa14.18□□□□□ -0.14
TPM3-207ENST00000341372 C11orf95C9JLR9 678 aaPredicted RBP14.17□□□□□ -0.14
TPM3-207ENST00000341372 NSD3Q9BZ95 1437 aa14.17□□□□□ -0.14
TPM3-207ENST00000341372 THSD7AQ9UPZ6 1657 aa14.17□□□□□ -0.14
TPM3-207ENST00000341372 CARD14Q9BXL6 1004 aa14.16□□□□□ -0.14
TPM3-207ENST00000341372 SPATA31A5Q5VU36 1347 aa14.16□□□□□ -0.14
TPM3-207ENST00000341372 SPATA31A7Q8IWB4 1347 aa14.16□□□□□ -0.14
TPM3-207ENST00000341372 RGPD5Q99666 1765 aa14.16□□□□□ -0.14
TPM3-207ENST00000341372 ZNF316A6NFI3 1004 aaPredicted RBP14.15□□□□□ -0.14
TPM3-207ENST00000341372 ONECUT3O60422 494 aaPredicted RBP14.15□□□□□ -0.14
TPM3-207ENST00000341372 FLIIQ13045 1269 aa14.15□□□□□ -0.14
TPM3-207ENST00000341372 RBM26Q5T8P6 1007 aaKnown RBP14.15□□□□□ -0.14
TPM3-207ENST00000341372 ANKRD26Q9UPS8 1709 aa14.15□□□□□ -0.14
TPM3-207ENST00000341372 ZEB1P37275 1124 aaPredicted RBP14.15□□□□□ -0.14
TPM3-207ENST00000341372 RGS22Q8NE09 1264 aa14.15□□□□□ -0.14
TPM3-207ENST00000341372 BRWD3Q6RI45 1802 aa14.14□□□□□ -0.15
TPM3-207ENST00000341372 FYB1O15117 783 aa14.14□□□□□ -0.15
TPM3-207ENST00000341372 RASEFQ8IZ41 740 aa14.14□□□□□ -0.15
TPM3-207ENST00000341372 CLUAP1Q96AJ1 413 aa14.14□□□□□ -0.15
TPM3-207ENST00000341372 KIF7Q2M1P5 1343 aa14.14□□□□□ -0.15
TPM3-207ENST00000341372 SPATA31A1Q5TZJ5 1347 aa14.13□□□□□ -0.15
TPM3-207ENST00000341372 COG3Q96JB2 828 aa14.13□□□□□ -0.15
TPM3-207ENST00000341372 MFRPQ9BY79 579 aa14.13□□□□□ -0.15
TPM3-207ENST00000341372 WNK3Q9BYP7 1800 aa14.12□□□□□ -0.15
TPM3-207ENST00000341372 TRAK2O60296 914 aa14.12□□□□□ -0.15
TPM3-207ENST00000341372 TRAIPQ9BWF2 469 aa14.12□□□□□ -0.15
TPM3-207ENST00000341372 CRB1P82279 1406 aa14.12□□□□□ -0.15
TPM3-207ENST00000341372 GPIHBP1Q8IV16 184 aa14.12□□□□□ -0.15
TPM3-207ENST00000341372 AXIN2Q9Y2T1 843 aa14.12□□□□□ -0.15
TPM3-207ENST00000341372 SOX12O15370 315 aa14.11□□□□□ -0.15
TPM3-207ENST00000341372 PPP1R37O75864 691 aa14.11□□□□□ -0.15
TPM3-207ENST00000341372 STRN4Q9NRL3 753 aa14.11□□□□□ -0.15
TPM3-207ENST00000341372 BLMP54132 1417 aaPredicted RBP14.11□□□□□ -0.15
TPM3-207ENST00000341372 LARP1Q6PKG0 1096 aaKnown RBP14.1□□□□□ -0.15
TPM3-207ENST00000341372 POLR3GLQ9BT43 218 aa14.1□□□□□ -0.15
TPM3-207ENST00000341372 GGNBP2Q9H3C7 697 aa14.1□□□□□ -0.15
TPM3-207ENST00000341372 FAM208AQ9UK61 1670 aaKnown RBP14.1□□□□□ -0.15
TPM3-207ENST00000341372 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
TPM3-207ENST00000341372 CGNL1Q0VF96 1302 aa14.1□□□□□ -0.15
TPM3-207ENST00000341372 WDR17Q8IZU2 1322 aa14.1□□□□□ -0.15
TPM3-207ENST00000341372 PARP4Q9UKK3 1724 aaKnown RBP14.1□□□□□ -0.15
TPM3-207ENST00000341372 RTL1A6NKG5 1358 aa14.09□□□□□ -0.15
TPM3-207ENST00000341372 EVA1CP58658 441 aa14.09□□□□□ -0.15
TPM3-207ENST00000341372 SEPT12Q8IYM1 358 aa14.09□□□□□ -0.15
TPM3-207ENST00000341372 PANK3Q9H999 370 aa14.08□□□□□ -0.15
TPM3-207ENST00000341372 MTMR7Q9Y216 660 aa14.08□□□□□ -0.15
TPM3-207ENST00000341372 THRAP3Q9Y2W1 955 aaKnown RBP14.08□□□□□ -0.15
TPM3-207ENST00000341372 NSD2O96028 1365 aa14.08□□□□□ -0.16
TPM3-207ENST00000341372 MAP3K19Q56UN5 1328 aa14.08□□□□□ -0.16
TPM3-207ENST00000341372 FAM98CQ17RN3 349 aaKnown RBP14.08□□□□□ -0.16
TPM3-207ENST00000341372 PEAK1Q9H792 1746 aa14.08□□□□□ -0.16
TPM3-207ENST00000341372 ERBB3P21860 1342 aa14.07□□□□□ -0.16
TPM3-207ENST00000341372 WASHC2AQ641Q2 1341 aa14.07□□□□□ -0.16
TPM3-207ENST00000341372 A6NJR5 290 aa14.07□□□□□ -0.16
TPM3-207ENST00000341372 AEBP1Q8IUX7 1158 aa14.07□□□□□ -0.16
TPM3-207ENST00000341372 KIF24Q5T7B8 1368 aa14.07□□□□□ -0.16
TPM3-207ENST00000341372 TCP11L2Q8N4U5 519 aa14.07□□□□□ -0.16
TPM3-207ENST00000341372 IP6K1Q92551 441 aa14.07□□□□□ -0.16
TPM3-207ENST00000341372 LRRC37A3O60309 1634 aa14.06□□□□□ -0.16
TPM3-207ENST00000341372 MNX1P50219 401 aaPredicted RBP14.06□□□□□ -0.16
TPM3-207ENST00000341372 DISP2A7MBM2 1401 aa14.06□□□□□ -0.16
TPM3-207ENST00000341372 ZNF428Q96B54 188 aa14.05□□□□□ -0.16
TPM3-207ENST00000341372 EP400Q96L91 3159 aa14.05□□□□□ -0.16
TPM3-207ENST00000341372 UPF1Q92900 1129 aaKnown RBP eCLIP14.05□□□□□ -0.167e-32■■■■□ 24.9
TPM3-207ENST00000341372 CARD10Q9BWT7 1032 aa14.05□□□□□ -0.16
TPM3-207ENST00000341372 HOXC9P31274 260 aa14.04□□□□□ -0.16
TPM3-207ENST00000341372 TOM1L2Q6ZVM7 507 aa14.04□□□□□ -0.16
TPM3-207ENST00000341372 MAP2P11137 1827 aaKnown RBP14.04□□□□□ -0.16
TPM3-207ENST00000341372 FBLN1P23142 703 aa14.03□□□□□ -0.16
TPM3-207ENST00000341372 KRT27Q7Z3Y8 459 aa14.03□□□□□ -0.16
TPM3-207ENST00000341372 FLT4P35916 1363 aa14.03□□□□□ -0.16
TPM3-207ENST00000341372 MLLT3P42568 568 aaPredicted RBP14.03□□□□□ -0.16
TPM3-207ENST00000341372 USP35Q9P2H5 1018 aa14.03□□□□□ -0.16
TPM3-207ENST00000341372 SMG6Q86US8 1419 aaKnown RBP14.03□□□□□ -0.16
TPM3-207ENST00000341372 PER1O15534 1290 aaPredicted RBP14.02□□□□□ -0.16
TPM3-207ENST00000341372 RRS1Q15050 365 aaKnown RBP14.02□□□□□ -0.16
TPM3-207ENST00000341372 ANKRD24Q8TF21 1146 aa14.02□□□□□ -0.16
TPM3-207ENST00000341372 INSRP06213 1382 aa14.02□□□□□ -0.17
TPM3-207ENST00000341372 RGPD2P0DJD1 1756 aa14.01□□□□□ -0.17
TPM3-207ENST00000341372 CSB-PGBD3P0DP91 1061 aa14.01□□□□□ -0.17
TPM3-207ENST00000341372 AMPHP49418 695 aa14.01□□□□□ -0.17
TPM3-207ENST00000341372 CDCA7Q9BWT1 371 aaPredicted RBP14.01□□□□□ -0.17
TPM3-207ENST00000341372 KNSTRNQ9Y448 316 aa14.01□□□□□ -0.17
TPM3-207ENST00000341372 NPC1L1Q9UHC9 1359 aa14.01□□□□□ -0.17
TPM3-207ENST00000341372 A0A0G2JS52 829 aa14□□□□□ -0.17
TPM3-207ENST00000341372 MYT1Q01538 1121 aa14□□□□□ -0.17
TPM3-207ENST00000341372 FOXD4L5Q5VV16 416 aaPredicted RBP13.99□□□□□ -0.17
TPM3-207ENST00000341372 FOXD4L4Q8WXT5 416 aaPredicted RBP13.99□□□□□ -0.17
TPM3-207ENST00000341372 ARIH1Q9Y4X5 557 aaPredicted RBP13.99□□□□□ -0.17
TPM3-207ENST00000341372 TNS2Q63HR2 1409 aa13.99□□□□□ -0.17
TPM3-207ENST00000341372 RGPD1P0DJD0 1748 aa13.98□□□□□ -0.17
TPM3-207ENST00000341372 EMILIN1Q9Y6C2 1016 aa13.98□□□□□ -0.17
TPM3-207ENST00000341372 NCAPD2Q15021 1401 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms