RNA–Protein interactions for RNA: ENST00000340635.10

PDE4D-203, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best) BASIC

Gene PDE4D, Length 8,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-203ENST00000340635 TTC16Q8NEE8 873 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 WDR33Q9C0J8 1336 aaKnown RBP16.19■□□□□ 0.18
PDE4D-203ENST00000340635 KIF5CO60282 957 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 SPECC1LQ69YQ0 1117 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 MPNDQ8N594 471 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 SPATA32Q96LK8 384 aa16.19■□□□□ 0.18
PDE4D-203ENST00000340635 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.19■□□□□ 0.18
PDE4D-203ENST00000340635 V9GYY5 206 aaPredicted RBP16.19■□□□□ 0.18
PDE4D-203ENST00000340635 SPECC1Q5M775 1068 aa16.18■□□□□ 0.18
PDE4D-203ENST00000340635 BRPF3Q9ULD4 1205 aa16.18■□□□□ 0.18
PDE4D-203ENST00000340635 CFAP100Q494V2 611 aa16.18■□□□□ 0.18
PDE4D-203ENST00000340635 L3MBTL2Q969R5 705 aa16.18■□□□□ 0.18
PDE4D-203ENST00000340635 ST20-MTHFSA0A0A6YYL1 179 aa16.18■□□□□ 0.18
PDE4D-203ENST00000340635 SEC63Q9UGP8 760 aaKnown RBP16.18■□□□□ 0.18
PDE4D-203ENST00000340635 ARL1P40616 181 aaPredicted RBP16.17■□□□□ 0.18
PDE4D-203ENST00000340635 TDO2P48775 406 aa16.17■□□□□ 0.18
PDE4D-203ENST00000340635 LARP1BQ659C4 914 aaKnown RBP16.17■□□□□ 0.18
PDE4D-203ENST00000340635 PIBF1Q8WXW3 757 aa16.17■□□□□ 0.18
PDE4D-203ENST00000340635 WASF1Q92558 559 aa16.17■□□□□ 0.18
PDE4D-203ENST00000340635 NAP1L3Q99457 506 aaPredicted RBP16.17■□□□□ 0.18
PDE4D-203ENST00000340635 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.17■□□□□ 0.18
PDE4D-203ENST00000340635 RAI14Q9P0K7 980 aa16.17■□□□□ 0.18
PDE4D-203ENST00000340635 LMAN1P49257 510 aa16.17■□□□□ 0.18
PDE4D-203ENST00000340635 MPHOSPH8Q99549 860 aa16.16■□□□□ 0.18
PDE4D-203ENST00000340635 IKBKGQ9Y6K9 419 aa16.16■□□□□ 0.18
PDE4D-203ENST00000340635 CCDC160A6NGH7 325 aa16.16■□□□□ 0.18
PDE4D-203ENST00000340635 KIF2AO00139 706 aaPredicted RBP16.16■□□□□ 0.18
PDE4D-203ENST00000340635 APBB1IPQ7Z5R6 666 aaPredicted RBP16.16■□□□□ 0.18
PDE4D-203ENST00000340635 FILIP1Q7Z7B0 1213 aa16.16■□□□□ 0.18
PDE4D-203ENST00000340635 SMG6Q86US8 1419 aaKnown RBP16.16■□□□□ 0.18
PDE4D-203ENST00000340635 CARMIL1Q5VZK9 1371 aa16.16■□□□□ 0.18
PDE4D-203ENST00000340635 UBA5Q9GZZ9 404 aa16.16■□□□□ 0.18
PDE4D-203ENST00000340635 ZSCAN12O43309 604 aa16.15■□□□□ 0.18
PDE4D-203ENST00000340635 SEPT6Q14141 434 aa16.15■□□□□ 0.18
PDE4D-203ENST00000340635 DNA2P51530 1060 aa16.15■□□□□ 0.18
PDE4D-203ENST00000340635 TNNT1P13805 278 aa16.15■□□□□ 0.18
PDE4D-203ENST00000340635 MIA2Q96PC5 1412 aa16.15■□□□□ 0.18
PDE4D-203ENST00000340635 NUP62CLQ9H1M0 184 aa16.14■□□□□ 0.18
PDE4D-203ENST00000340635 FGFR1OPO95684 399 aaKnown RBP16.14■□□□□ 0.17
PDE4D-203ENST00000340635 RGS22Q8NE09 1264 aa16.14■□□□□ 0.17
PDE4D-203ENST00000340635 NACADO15069 1562 aa16.14■□□□□ 0.17
PDE4D-203ENST00000340635 GRPEL1Q9HAV7 217 aa16.14■□□□□ 0.17
PDE4D-203ENST00000340635 FKBP4Q02790 459 aaKnown RBP eCLIP16.14■□□□□ 0.17
PDE4D-203ENST00000340635 PANK1Q8TE04 598 aa16.14■□□□□ 0.17
PDE4D-203ENST00000340635 LRRC45Q96CN5 670 aa16.14■□□□□ 0.17
PDE4D-203ENST00000340635 CUX2O14529 1486 aa16.13■□□□□ 0.17
PDE4D-203ENST00000340635 FBF1Q8TES7 1133 aa16.13■□□□□ 0.17
PDE4D-203ENST00000340635 SLU7O95391 586 aaKnown RBP16.13■□□□□ 0.17
PDE4D-203ENST00000340635 PAFAH1B1P43034 410 aa16.13■□□□□ 0.17
PDE4D-203ENST00000340635 GNAI2P04899 355 aa16.13■□□□□ 0.17
PDE4D-203ENST00000340635 HLTFQ14527 1009 aaKnown RBP eCLIP16.13■□□□□ 0.17
PDE4D-203ENST00000340635 TMOD2Q9NZR1 351 aa16.13■□□□□ 0.17
PDE4D-203ENST00000340635 NAA15Q9BXJ9 866 aaKnown RBP16.12■□□□□ 0.17
PDE4D-203ENST00000340635 CBX1P83916 185 aa16.12■□□□□ 0.17
PDE4D-203ENST00000340635 USO1O60763 962 aaKnown RBP16.12■□□□□ 0.17
PDE4D-203ENST00000340635 MXRA7P84157 204 aa16.12■□□□□ 0.17
PDE4D-203ENST00000340635 CA8P35219 290 aa16.12■□□□□ 0.17
PDE4D-203ENST00000340635 PLCD3Q8N3E9 789 aa16.12■□□□□ 0.17
PDE4D-203ENST00000340635 NOL3O60936 208 aaKnown RBP16.12■□□□□ 0.17
PDE4D-203ENST00000340635 BBXQ8WY36 941 aaPredicted RBP16.11■□□□□ 0.17
PDE4D-203ENST00000340635 SIL1Q9H173 461 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 PSMC4P43686 418 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 NUTM2GQ5VZR2 741 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 CTR9Q6PD62 1173 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 PTPN14Q15678 1187 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 CCDC18Q5T9S5 1454 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 ZNF287Q9HBT7 754 aa16.11■□□□□ 0.17
PDE4D-203ENST00000340635 A0A1W2PRG0 241 aa16.1■□□□□ 0.17
PDE4D-203ENST00000340635 DDX46Q7L014 1031 aaKnown RBP16.1■□□□□ 0.17
PDE4D-203ENST00000340635 SFPQP23246 707 aaKnown RBP eCLIP16.1■□□□□ 0.17
PDE4D-203ENST00000340635 ESPNB1AK53 854 aa16.1■□□□□ 0.17
PDE4D-203ENST00000340635 MAP4K4O95819 1239 aaPredicted RBP16.1■□□□□ 0.17
PDE4D-203ENST00000340635 ACTN2P35609 894 aa16.1■□□□□ 0.17
PDE4D-203ENST00000340635 CFAP58Q5T655 872 aa16.1■□□□□ 0.17
PDE4D-203ENST00000340635 NUP88Q99567 741 aaPredicted RBP16.1■□□□□ 0.17
PDE4D-203ENST00000340635 GTPBP4Q9BZE4 634 aaKnown RBP16.1■□□□□ 0.17
PDE4D-203ENST00000340635 ANAPC4Q9UJX5 808 aa16.1■□□□□ 0.17
PDE4D-203ENST00000340635 VPS8Q8N3P4 1428 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 CETN1Q12798 172 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 ALS2CR12Q96Q35 445 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 PRKRIP1Q9H875 184 aaPredicted RBP16.09■□□□□ 0.17
PDE4D-203ENST00000340635 CTNNA3Q9UI47 895 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 TPD52P55327 224 aaPredicted RBP16.09■□□□□ 0.17
PDE4D-203ENST00000340635 CCDC6Q16204 474 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 ZNF354CQ86Y25 554 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 KIF18AQ8NI77 898 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 PRPF4BQ13523 1007 aaKnown RBP16.09■□□□□ 0.17
PDE4D-203ENST00000340635 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
PDE4D-203ENST00000340635 CCDC83Q8IWF9 413 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 CLGNO14967 610 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 KLHL10Q6JEL2 608 aa16.09■□□□□ 0.17
PDE4D-203ENST00000340635 NDC80O14777 642 aa16.08■□□□□ 0.17
PDE4D-203ENST00000340635 POLR3GO15318 223 aaPredicted RBP16.08■□□□□ 0.17
PDE4D-203ENST00000340635 RRBP1Q9P2E9 1410 aaKnown RBP16.08■□□□□ 0.17
PDE4D-203ENST00000340635 TDRD12Q587J7 1177 aaKnown RBP16.08■□□□□ 0.16
PDE4D-203ENST00000340635 BLOC1S2Q6QNY1 142 aa16.08■□□□□ 0.16
PDE4D-203ENST00000340635 MAATS1Q7Z4T9 603 aa16.08■□□□□ 0.16
PDE4D-203ENST00000340635 IL27Q8NEV9 243 aa16.08■□□□□ 0.16
PDE4D-203ENST00000340635 LRP2BPQ9P2M1 347 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms