RNA–Protein interactions for RNA: ENST00000339987.7

SDCBP2-201, Transcript of syndecan binding protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDCBP2, Length 1,404 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP2-201ENST00000339987 OVOS2A0A0G2JMS6 1433 aa23.68■■□□□ 1.38
SDCBP2-201ENST00000339987 GLI3P10071 1580 aa23.68■■□□□ 1.38
SDCBP2-201ENST00000339987 GJD4Q96KN9 370 aaPredicted RBP23.67■■□□□ 1.38
SDCBP2-201ENST00000339987 QTRT2Q9H974 415 aaKnown RBP23.67■■□□□ 1.38
SDCBP2-201ENST00000339987 PHACTR3Q96KR7 559 aa23.67■■□□□ 1.38
SDCBP2-201ENST00000339987 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.66■■□□□ 1.38
SDCBP2-201ENST00000339987 PKD1L3Q7Z443 1732 aa23.66■■□□□ 1.38
SDCBP2-201ENST00000339987 AMOTQ4VCS5 1084 aa23.65■■□□□ 1.38
SDCBP2-201ENST00000339987 PLEKHO1Q53GL0 409 aaPredicted RBP23.64■■□□□ 1.37
SDCBP2-201ENST00000339987 APAF1O14727 1248 aa23.62■■□□□ 1.37
SDCBP2-201ENST00000339987 GAS2L2Q8NHY3 880 aa23.62■■□□□ 1.37
SDCBP2-201ENST00000339987 PHF23Q9BUL5 403 aaPredicted RBP23.62■■□□□ 1.37
SDCBP2-201ENST00000339987 RGS17Q9UGC6 210 aaPredicted RBP23.62■■□□□ 1.37
SDCBP2-201ENST00000339987 THSD7AQ9UPZ6 1657 aa23.61■■□□□ 1.37
SDCBP2-201ENST00000339987 NFE2L2Q16236 605 aa23.61■■□□□ 1.37
SDCBP2-201ENST00000339987 MTHFSDQ2M296 383 aaKnown RBP23.61■■□□□ 1.37
SDCBP2-201ENST00000339987 SPG7Q9UQ90 795 aa23.61■■□□□ 1.37
SDCBP2-201ENST00000339987 TMPOP42166 694 aaKnown RBP23.6■■□□□ 1.37
SDCBP2-201ENST00000339987 FAM98CQ17RN3 349 aaKnown RBP23.6■■□□□ 1.37
SDCBP2-201ENST00000339987 NCBP3Q53F19 620 aaKnown RBP23.6■■□□□ 1.37
SDCBP2-201ENST00000339987 ONECUT3O60422 494 aaPredicted RBP23.59■■□□□ 1.37
SDCBP2-201ENST00000339987 NGEFQ8N5V2 710 aa23.59■■□□□ 1.37
SDCBP2-201ENST00000339987 ZCRB1Q8TBF4 217 aaKnown RBP23.59■■□□□ 1.37
SDCBP2-201ENST00000339987 TNS2Q63HR2 1409 aa23.59■■□□□ 1.37
SDCBP2-201ENST00000339987 RBM6P78332 1123 aaKnown RBP23.59■■□□□ 1.37
SDCBP2-201ENST00000339987 LRRC37A3O60309 1634 aa23.58■■□□□ 1.37
SDCBP2-201ENST00000339987 SHANK3Q9BYB0 1731 aa23.58■■□□□ 1.36
SDCBP2-201ENST00000339987 ZNF530Q6P9A1 599 aaPredicted RBP23.57■■□□□ 1.36
SDCBP2-201ENST00000339987 PCDH11XQ9BZA7 1347 aa23.56■■□□□ 1.36
SDCBP2-201ENST00000339987 PCDH11YQ9BZA8 1340 aa23.56■■□□□ 1.36
SDCBP2-201ENST00000339987 EXOC5O00471 708 aa23.56■■□□□ 1.36
SDCBP2-201ENST00000339987 DLG5Q8TDM6 1919 aa23.55■■□□□ 1.36
SDCBP2-201ENST00000339987 DDB1Q16531 1140 aa23.55■■□□□ 1.36
SDCBP2-201ENST00000339987 RRP7AQ9Y3A4 280 aaKnown RBP23.55■■□□□ 1.36
SDCBP2-201ENST00000339987 RIPK4P57078 832 aa23.54■■□□□ 1.36
SDCBP2-201ENST00000339987 HNRNPUQ00839 825 aaKnown RBP eCLIP23.54■■□□□ 1.36
SDCBP2-201ENST00000339987 AKAP4Q5JQC9 854 aa23.54■■□□□ 1.36
SDCBP2-201ENST00000339987 MAP3K5Q99683 1374 aa23.54■■□□□ 1.36
SDCBP2-201ENST00000339987 HTATSF1O43719 755 aaKnown RBP23.53■■□□□ 1.36
SDCBP2-201ENST00000339987 LMOD3Q0VAK6 560 aa23.53■■□□□ 1.36
SDCBP2-201ENST00000339987 CCDC27Q2M243 656 aa23.53■■□□□ 1.36
SDCBP2-201ENST00000339987 C1orf141Q5JVX7 400 aa23.53■■□□□ 1.36
SDCBP2-201ENST00000339987 POTEAQ6S8J7 498 aa23.53■■□□□ 1.36
SDCBP2-201ENST00000339987 IFNL2Q8IZJ0 200 aa23.53■■□□□ 1.36
SDCBP2-201ENST00000339987 CYP27B1O15528 508 aa23.52■■□□□ 1.36
SDCBP2-201ENST00000339987 PHKG2P15735 406 aa23.52■■□□□ 1.36
SDCBP2-201ENST00000339987 RXRBP28702 533 aa23.52■■□□□ 1.36
SDCBP2-201ENST00000339987 GNAT3A8MTJ3 354 aa23.51■■□□□ 1.35
SDCBP2-201ENST00000339987 NEUROD2Q15784 382 aa23.51■■□□□ 1.35
SDCBP2-201ENST00000339987 SEPT12Q8IYM1 358 aa23.5■■□□□ 1.35
SDCBP2-201ENST00000339987 TRIM35Q9UPQ4 493 aa23.5■■□□□ 1.35
SDCBP2-201ENST00000339987 A0A0G2JS52 829 aa23.5■■□□□ 1.35
SDCBP2-201ENST00000339987 HSP90AB1P08238 724 aaKnown RBP23.5■■□□□ 1.35
SDCBP2-201ENST00000339987 MYT1Q01538 1121 aa23.5■■□□□ 1.35
SDCBP2-201ENST00000339987 ADAMTS7Q9UKP4 1686 aa23.49■■□□□ 1.35
SDCBP2-201ENST00000339987 SENP3-EIF4A1A0A087X0R7 540 aa23.49■■□□□ 1.35
SDCBP2-201ENST00000339987 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
SDCBP2-201ENST00000339987 DDX54Q8TDD1 881 aaKnown RBP23.49■■□□□ 1.35
SDCBP2-201ENST00000339987 RTF1Q92541 710 aaKnown RBP23.48■■□□□ 1.35
SDCBP2-201ENST00000339987 ZBED9Q6R2W3 1325 aa23.47■■□□□ 1.35
SDCBP2-201ENST00000339987 WWC1Q8IX03 1113 aa23.47■■□□□ 1.35
SDCBP2-201ENST00000339987 SALL2Q9Y467 1007 aaPredicted RBP23.47■■□□□ 1.35
SDCBP2-201ENST00000339987 ZNF521Q96K83 1311 aa23.46■■□□□ 1.35
SDCBP2-201ENST00000339987 KDM6AO15550 1401 aaPredicted RBP23.46■■□□□ 1.35
SDCBP2-201ENST00000339987 CEMIPQ8WUJ3 1361 aa23.45■■□□□ 1.35
SDCBP2-201ENST00000339987 PDE3BQ13370 1112 aa23.45■■□□□ 1.34
SDCBP2-201ENST00000339987 MARCH10Q8NA82 808 aaPredicted RBP23.45■■□□□ 1.34
SDCBP2-201ENST00000339987 DCAF5Q96JK2 942 aa23.45■■□□□ 1.34
SDCBP2-201ENST00000339987 YTHDC1Q96MU7 727 aaKnown RBP23.45■■□□□ 1.34
SDCBP2-201ENST00000339987 SCN11AQ9UI33 1791 aa23.45■■□□□ 1.34
SDCBP2-201ENST00000339987 IL17REQ8NFR9 667 aa23.44■■□□□ 1.34
SDCBP2-201ENST00000339987 RGS12O14924 1447 aa23.44■■□□□ 1.34
SDCBP2-201ENST00000339987 RNMTO43148 476 aaKnown RBP23.43■■□□□ 1.34
SDCBP2-201ENST00000339987 MPRIPQ6WCQ1 1025 aa23.43■■□□□ 1.34
SDCBP2-201ENST00000339987 VIRMAQ69YN4 1812 aaKnown RBP23.43■■□□□ 1.34
SDCBP2-201ENST00000339987 MCM10Q7L590 875 aa23.42■■□□□ 1.34
SDCBP2-201ENST00000339987 WDR63Q8IWG1 891 aa23.42■■□□□ 1.34
SDCBP2-201ENST00000339987 BRWD3Q6RI45 1802 aa23.42■■□□□ 1.34
SDCBP2-201ENST00000339987 CALD1Q05682 793 aaKnown RBP23.42■■□□□ 1.34
SDCBP2-201ENST00000339987 DCTN1Q14203 1278 aa23.42■■□□□ 1.34
SDCBP2-201ENST00000339987 LGR6Q9HBX8 967 aa23.42■■□□□ 1.34
SDCBP2-201ENST00000339987 BCL9O00512 1426 aa23.41■■□□□ 1.34
SDCBP2-201ENST00000339987 MRC1P22897 1456 aa23.4■■□□□ 1.34
SDCBP2-201ENST00000339987 THUMPD2Q9BTF0 503 aaKnown RBP23.4■■□□□ 1.34
SDCBP2-201ENST00000339987 IL16Q14005 1332 aa23.39■■□□□ 1.34
SDCBP2-201ENST00000339987 TOGARAM1Q9Y4F4 1720 aa23.39■■□□□ 1.34
SDCBP2-201ENST00000339987 ERVV-2B6SEH9 535 aa23.39■■□□□ 1.33
SDCBP2-201ENST00000339987 KRT27Q7Z3Y8 459 aa23.39■■□□□ 1.33
SDCBP2-201ENST00000339987 SIPA1L3O60292 1781 aaPredicted RBP23.36■■□□□ 1.33
SDCBP2-201ENST00000339987 TEFQ10587 303 aa23.36■■□□□ 1.33
SDCBP2-201ENST00000339987 DOT1LQ8TEK3 1739 aa23.36■■□□□ 1.33
SDCBP2-201ENST00000339987 GOLGA2Q08379 1002 aa23.35■■□□□ 1.33
SDCBP2-201ENST00000339987 SLC52A2Q9HAB3 445 aa23.35■■□□□ 1.33
SDCBP2-201ENST00000339987 IFT57Q9NWB7 429 aa23.34■■□□□ 1.33
SDCBP2-201ENST00000339987 TAF7Q15545 349 aaPredicted RBP23.33■■□□□ 1.33
SDCBP2-201ENST00000339987 BABAM1Q9NWV8 329 aa23.33■■□□□ 1.33
SDCBP2-201ENST00000339987 ZNF853P0CG23 659 aa23.33■■□□□ 1.32
SDCBP2-201ENST00000339987 CABP4P57796 275 aa23.33■■□□□ 1.32
SDCBP2-201ENST00000339987 GNAI1P63096 354 aa23.33■■□□□ 1.32
SDCBP2-201ENST00000339987 CFAP44Q96MT7 982 aa23.33■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms