RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 PKD1L3Q7Z443 1732 aa22.45■■□□□ 1.18
SFN-201ENST00000339276 EXOC5O00471 708 aa22.44■■□□□ 1.18
SFN-201ENST00000339276 HMOX1P09601 288 aa22.44■■□□□ 1.18
SFN-201ENST00000339276 NUDCQ9Y266 331 aa22.42■■□□□ 1.18
SFN-201ENST00000339276 MARCH10Q8NA82 808 aaPredicted RBP22.41■■□□□ 1.18
SFN-201ENST00000339276 ZCRB1Q8TBF4 217 aaKnown RBP22.41■■□□□ 1.18
SFN-201ENST00000339276 EP400Q96L91 3159 aa22.4■■□□□ 1.18
SFN-201ENST00000339276 U2AF1L5P0DN76 240 aaPredicted RBP22.38■■□□□ 1.17
SFN-201ENST00000339276 U2AF1Q01081 240 aaKnown RBP eCLIP22.38■■□□□ 1.17
SFN-201ENST00000339276 DDX54Q8TDD1 881 aaKnown RBP22.38■■□□□ 1.17
SFN-201ENST00000339276 PLEKHG2Q9H7P9 1386 aa22.38■■□□□ 1.17
SFN-201ENST00000339276 CCDC184Q52MB2 194 aa22.36■■□□□ 1.17
SFN-201ENST00000339276 SPG7Q9UQ90 795 aa22.35■■□□□ 1.17
SFN-201ENST00000339276 PCDH11XQ9BZA7 1347 aa22.35■■□□□ 1.17
SFN-201ENST00000339276 PCDH11YQ9BZA8 1340 aa22.35■■□□□ 1.17
SFN-201ENST00000339276 DIEXFQ68CQ4 756 aaKnown RBP22.34■■□□□ 1.17
SFN-201ENST00000339276 RSPH6AQ9H0K4 717 aa22.34■■□□□ 1.17
SFN-201ENST00000339276 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.34■■□□□ 1.17
SFN-201ENST00000339276 CYP27B1O15528 508 aa22.33■■□□□ 1.17
SFN-201ENST00000339276 FAM196AQ6ZSG2 479 aa22.33■■□□□ 1.17
SFN-201ENST00000339276 SBF2Q86WG5 1849 aa22.33■■□□□ 1.17
SFN-201ENST00000339276 PRKAR2BP31323 418 aa22.32■■□□□ 1.16
SFN-201ENST00000339276 PLEKHO1Q53GL0 409 aaPredicted RBP22.32■■□□□ 1.16
SFN-201ENST00000339276 BCL9O00512 1426 aa22.32■■□□□ 1.16
SFN-201ENST00000339276 AMOTQ4VCS5 1084 aa22.31■■□□□ 1.16
SFN-201ENST00000339276 DOT1LQ8TEK3 1739 aa22.31■■□□□ 1.16
SFN-201ENST00000339276 FCHSD2O94868 740 aa22.31■■□□□ 1.16
SFN-201ENST00000339276 ZNF530Q6P9A1 599 aaPredicted RBP22.3■■□□□ 1.16
SFN-201ENST00000339276 TOGARAM1Q9Y4F4 1720 aa22.29■■□□□ 1.16
SFN-201ENST00000339276 PHKG2P15735 406 aa22.29■■□□□ 1.16
SFN-201ENST00000339276 UPF1Q92900 1129 aaKnown RBP eCLIP22.29■■□□□ 1.16
SFN-201ENST00000339276 MRS2Q9HD23 443 aa22.29■■□□□ 1.16
SFN-201ENST00000339276 TNS1Q9HBL0 1735 aaKnown RBP22.28■■□□□ 1.16
SFN-201ENST00000339276 NHSQ6T4R5 1651 aa22.28■■□□□ 1.16
SFN-201ENST00000339276 TRIM37O94972 964 aa22.28■■□□□ 1.16
SFN-201ENST00000339276 WDR43Q15061 677 aaKnown RBP eCLIP22.28■■□□□ 1.16
SFN-201ENST00000339276 MTHFSDQ2M296 383 aaKnown RBP22.28■■□□□ 1.16
SFN-201ENST00000339276 IFNL2Q8IZJ0 200 aa22.28■■□□□ 1.16
SFN-201ENST00000339276 PHACTR3Q96KR7 559 aa22.28■■□□□ 1.16
SFN-201ENST00000339276 SOCS7O14512 581 aa22.27■■□□□ 1.16
SFN-201ENST00000339276 ACSBG1Q96GR2 724 aa22.27■■□□□ 1.16
SFN-201ENST00000339276 NKX1-1Q15270 411 aaPredicted RBP22.25■■□□□ 1.15
SFN-201ENST00000339276 PTF1AQ7RTS3 328 aa22.25■■□□□ 1.15
SFN-201ENST00000339276 PLEKHF1Q96S99 279 aa22.25■■□□□ 1.15
SFN-201ENST00000339276 ADAMTS8Q9UP79 889 aa22.25■■□□□ 1.15
SFN-201ENST00000339276 KCNQ2O43526 872 aa22.24■■□□□ 1.15
SFN-201ENST00000339276 C1orf141Q5JVX7 400 aa22.24■■□□□ 1.15
SFN-201ENST00000339276 KAT6BQ8WYB5 2073 aa22.23■■□□□ 1.15
SFN-201ENST00000339276 KDM6AO15550 1401 aaPredicted RBP22.22■■□□□ 1.15
SFN-201ENST00000339276 GAS2L2Q8NHY3 880 aa22.22■■□□□ 1.15
SFN-201ENST00000339276 ITGB4P16144 1822 aa22.21■■□□□ 1.15
SFN-201ENST00000339276 VIRMAQ69YN4 1812 aaKnown RBP22.21■■□□□ 1.15
SFN-201ENST00000339276 AKAP4Q5JQC9 854 aa22.21■■□□□ 1.15
SFN-201ENST00000339276 CCDC146Q8IYE0 955 aa22.21■■□□□ 1.15
SFN-201ENST00000339276 PNISRQ8TF01 805 aaKnown RBP22.21■■□□□ 1.15
SFN-201ENST00000339276 BTAF1O14981 1849 aa22.21■■□□□ 1.15
SFN-201ENST00000339276 SCN11AQ9UI33 1791 aa22.2■■□□□ 1.14
SFN-201ENST00000339276 PRIM1P49642 420 aaKnown RBP22.2■■□□□ 1.14
SFN-201ENST00000339276 MPRIPQ6WCQ1 1025 aa22.2■■□□□ 1.14
SFN-201ENST00000339276 CCDC125Q86Z20 511 aa22.2■■□□□ 1.14
SFN-201ENST00000339276 SYTL4Q96C24 671 aaPredicted RBP22.2■■□□□ 1.14
SFN-201ENST00000339276 BCL11BQ9C0K0 894 aaPredicted RBP22.2■■□□□ 1.14
SFN-201ENST00000339276 PNNQ9H307 717 aaKnown RBP22.2■■□□□ 1.14
SFN-201ENST00000339276 MAPK8IP3Q9UPT6 1336 aa22.2■■□□□ 1.14
SFN-201ENST00000339276 MAP3K5Q99683 1374 aa22.19■■□□□ 1.14
SFN-201ENST00000339276 HSP90AB1P08238 724 aaKnown RBP22.19■■□□□ 1.14
SFN-201ENST00000339276 SF3B2Q13435 895 aaKnown RBP22.19■■□□□ 1.14
SFN-201ENST00000339276 MIER1Q8N108 512 aa22.19■■□□□ 1.14
SFN-201ENST00000339276 DCAF5Q96JK2 942 aa22.19■■□□□ 1.14
SFN-201ENST00000339276 ADAMTS7Q9UKP4 1686 aa22.19■■□□□ 1.14
SFN-201ENST00000339276 NEFMP07197 916 aa22.18■■□□□ 1.14
SFN-201ENST00000339276 DLG5Q8TDM6 1919 aa22.18■■□□□ 1.14
SFN-201ENST00000339276 APBA3O96018 575 aa22.16■■□□□ 1.14
SFN-201ENST00000339276 GNAT3A8MTJ3 354 aa22.15■■□□□ 1.14
SFN-201ENST00000339276 DEFB132Q7Z7B7 95 aa22.15■■□□□ 1.14
SFN-201ENST00000339276 RUNDC1Q96C34 613 aa22.15■■□□□ 1.14
SFN-201ENST00000339276 LGR6Q9HBX8 967 aa22.15■■□□□ 1.14
SFN-201ENST00000339276 CCER2I3L3R5 266 aa22.14■■□□□ 1.14
SFN-201ENST00000339276 RNMTO43148 476 aaKnown RBP22.14■■□□□ 1.14
SFN-201ENST00000339276 NFE2L2Q16236 605 aa22.14■■□□□ 1.14
SFN-201ENST00000339276 BAG6P46379 1132 aa22.13■■□□□ 1.13
SFN-201ENST00000339276 MRC1P22897 1456 aa22.13■■□□□ 1.13
SFN-201ENST00000339276 RGPD3A6NKT7 1758 aaPredicted RBP22.13■■□□□ 1.13
SFN-201ENST00000339276 RGPD4Q7Z3J3 1758 aa22.13■■□□□ 1.13
SFN-201ENST00000339276 ERVV-2B6SEH9 535 aa22.12■■□□□ 1.13
SFN-201ENST00000339276 FAM9BQ8IZU0 186 aa22.12■■□□□ 1.13
SFN-201ENST00000339276 TMOD3Q9NYL9 352 aa22.12■■□□□ 1.13
SFN-201ENST00000339276 EN1Q05925 392 aaPredicted RBP22.11■■□□□ 1.13
SFN-201ENST00000339276 IL17REQ8NFR9 667 aa22.11■■□□□ 1.13
SFN-201ENST00000339276 PIGBQ92521 554 aa22.11■■□□□ 1.13
SFN-201ENST00000339276 CABP4P57796 275 aa22.1■■□□□ 1.13
SFN-201ENST00000339276 RRP7AQ9Y3A4 280 aaKnown RBP22.1■■□□□ 1.13
SFN-201ENST00000339276 TMPOP42166 694 aaKnown RBP22.09■■□□□ 1.13
SFN-201ENST00000339276 MCM10Q7L590 875 aa22.09■■□□□ 1.13
SFN-201ENST00000339276 SIPA1L3O60292 1781 aaPredicted RBP22.08■■□□□ 1.13
SFN-201ENST00000339276 DCTN1Q14203 1278 aa22.08■■□□□ 1.13
SFN-201ENST00000339276 EZH2Q15910 746 aaKnown RBP22.08■■□□□ 1.13
SFN-201ENST00000339276 NFATC2IPQ8NCF5 419 aa22.08■■□□□ 1.13
SFN-201ENST00000339276 CEMIPQ8WUJ3 1361 aa22.08■■□□□ 1.13
SFN-201ENST00000339276 RTF1Q92541 710 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 100.3 ms